Asol089504.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720679.1:40173678-40179691[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-13 6.1e-12 48.2 0.0 3 43 20 60 18 62 0.95
Sequence Information
- Coding Sequence
- ATGCCAAGAAATTTTAGACGTAAATTTGGTGCGCCTTTGAGAAGAGACTATTCTCTGGACCAACTAGAACTAGCACTGGAAGCTGTTGTAAATGGCAGATATTCTTTTTCACAAGCAGCTGAGAGATTTGGTGTACCAAAGACTACAATATATAGAAGATATAGAGGCCAGAATTCTGAAAAACTTGGTCGTCCGACTGCTCTAACTAGTATTGAGGAGAAACAAATTGTAAGCTGTCTGACAACAGCTGCGCAGTTTGGAATTCCGTTTACAGACAGAGGCTTGAGAGAATTCGTTCAGCAATATTTAAATCGGAAAGGGGTCGCAAGTCCAATTTTTGTTTACAATCTTCCGGGACCAGATTGGTTACAATCTTTTATGAAAAGAAATAAATCACTATCTATAAGACTGTCAGAAAACATGAAGAGAAGTAAAGCAGAATTAAGTGAAGATGTTTTAAGGACTTATTTTGAGGAGCTAGGAAGATCTCTTAATGGGGTTCCACCTGACAACATCATAAACTATGATGAAACTAACTTCATCGATGATCCTGGAAAGCAACGTGTAATTATCAAAAGGATAAGTAAACATGCAAGTCGCATCATGGACACCTCAAAAAATGCTACTTCTGTCATGTTTGCAGCGTCAGGTAGTGGACAGTTATTACCTCCGTATGTGGTTTTTAAATCTAAATTTGAGGACTGGTTTTTACAAATTGCTTTACCTTATCTGAAAAGAAAGGTAGGAAAAAAAGTTCTTATTGGTGACAACTTGGCTTCCCACCTATCTGAATCTGTTATAAGAAAGTGCACTGAGAACAATATCAACTTTATTTTATTACCACCAAACAGCACCCACTTGTGTCAGCCATTGGACGTCTGTGTTTTTCGCCCCATGAAAATTACATGGCGAAAAGTTCTTCTAAAATGGAAGATGAAACATAAAGGAACAGTTCCGAAATGTGAATTTTCAAATCTACTTCGAGAAACTTTAGATTCTATGCAACCCAACTTGGAGGCAAATATTAAGTCCGGATTTGAGGCCTGTGGCATTATTCCTTTAAATGCTGAAAGGGTCATAAATAAAATCCTCTCCAGAAGTAGGGACAGAAATGGGGCCAATGATGAGTTGATAGCGTCATTTACTAATATTGTTGAGCAAGCTACAAGGAAAGAAAAACCAACTGtgggaagaaagaaaaaaattaatgttgtaCCTGGGCGGTCAGTAACGGAAAATGATTTTCTTCAACTGGAAAACTCGAGTGTAAACGATGTTCAGCCTGCATCTGAAAGTTTCGATGGAAACCAAAGCAATGAAGACTCTGACATAGAAGTCAGCAGTAGTGCCTTAGAATTAAAAGTGCCTGCCAAAAATTGTGATCTTACTGCAATAATAGTGGATATCATAAAAGAGGAAATGCTGATACGAATGAATGAAGCCAAAGGATTTATATTAAATGGTTTCCCTCGAACTAGCAAGCAGGCTGTAATGTTTGTGAAAGAGGTTAAAGACGTGGACGCTATTGTATATCTCTATTCCGAAACTCTGAAAATGGTGTCTCGTGTTCAAGAAAAGAAAGCTCAACCAAAATCAGCGAACAATGGAGAAGACATTAGTGCGCTTAGTGAATCAATACATCACTTAGTGGAGGTACGCCAGAATGAAAATTCGTCCCTGGAGTCAAACTTAGACACACAGTCTTTAGCATTACAGcctgtaaacgttgaagaagttCTTACGAAGGATGTGCGAAGCGATGAGACGGACGACGAATAG
- Protein Sequence
- MPRNFRRKFGAPLRRDYSLDQLELALEAVVNGRYSFSQAAERFGVPKTTIYRRYRGQNSEKLGRPTALTSIEEKQIVSCLTTAAQFGIPFTDRGLREFVQQYLNRKGVASPIFVYNLPGPDWLQSFMKRNKSLSIRLSENMKRSKAELSEDVLRTYFEELGRSLNGVPPDNIINYDETNFIDDPGKQRVIIKRISKHASRIMDTSKNATSVMFAASGSGQLLPPYVVFKSKFEDWFLQIALPYLKRKVGKKVLIGDNLASHLSESVIRKCTENNINFILLPPNSTHLCQPLDVCVFRPMKITWRKVLLKWKMKHKGTVPKCEFSNLLRETLDSMQPNLEANIKSGFEACGIIPLNAERVINKILSRSRDRNGANDELIASFTNIVEQATRKEKPTVGRKKKINVVPGRSVTENDFLQLENSSVNDVQPASESFDGNQSNEDSDIEVSSSALELKVPAKNCDLTAIIVDIIKEEMLIRMNEAKGFILNGFPRTSKQAVMFVKEVKDVDAIVYLYSETLKMVSRVQEKKAQPKSANNGEDISALSESIHHLVEVRQNENSSLESNLDTQSLALQPVNVEEVLTKDVRSDETDDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065206; iTF_00065197; iTF_00065172; iTF_00065212; iTF_00065181; iTF_00065182; iTF_00065183;
- 90% Identity
- -
- 80% Identity
- -