Basic Information

Gene Symbol
-
Assembly
GCA_963170755.1
Location
OY720677.1:15937100-15976641[-]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.12 6.9e+03 -0.2 0.0 79 118 870 909 855 918 0.84
2 10 0.044 2.6e+03 1.2 0.0 77 112 1066 1101 1037 1108 0.79
3 10 0.00072 42 7.0 0.0 65 117 1186 1238 1179 1248 0.84
4 10 0.0047 2.8e+02 4.3 0.0 66 116 1319 1369 1305 1375 0.81
5 10 0.014 8.4e+02 2.7 0.0 66 117 1451 1502 1432 1512 0.81
6 10 0.47 2.7e+04 -2.2 0.0 78 112 1529 1563 1514 1570 0.78
7 10 0.32 1.9e+04 -1.6 0.0 68 116 1651 1699 1644 1702 0.77
8 10 0.47 2.8e+04 -2.2 0.0 74 116 1789 1831 1778 1837 0.76
9 10 0.024 1.4e+03 2.0 0.0 64 117 1845 1898 1828 1903 0.85
10 10 0.036 2.1e+03 1.4 0.0 62 117 1941 1996 1924 2001 0.77

Sequence Information

Coding Sequence
ATGCAAGTAAATATTGGTAAATTGAATCCAGGCATCGATTATCAATTCAAAGTCATCACTTATACAGCAGTTCGGCTCTCGGAGAATCCCGATGTAGACAACTTTCTCATCTACACAAATAGGGATGAAGTACCAGGTTTCGATGACATTGTCGTCAAAGTATGGTATAAATCTCAACCGAAACCATTTGCTTACTTGGGTCAAATTAAGCATAGAAGCCGCAACATAAACCTGAATAATAGtaagaacaatataaaaaaatacagaGATCAAATGGAAGCCATCTTTGtcgaaaagaataaaaatttatttcttcaGGAGCTTTTCACTAATGTGCCACATGAAAATGTAGAATTTTGGTTTTTGTGTACCAAATACGTTGAGAATACTCAAACCCATGAACCTATCATCGTAAAAAAGGTGCATTACGATGTAATTCCGAACGCAATTTATAAATCCATGTTTTCATTCACAAAAGATGCTGGTTGTTATAAGCTTACACCGATAGGAACTATTAAGGGACCAGTTTATTTTGACAGATTTCGTCTGTTCTTAAATCAACCTGATATTAACGAAATAAACGAACACATTTTAAAATGCGATGAGAAAACATTTACCAAAGAAACGACGACAAAAATTATAGCCTATgtcacagattattttcaaacaCCAAATGGTTTACAAGGTTTAGGGAagcgtgtctttcaaattcaacTCTTAAGCATATGCTTGTCACTATTTATGATTCCACCAACAGAGGCTATCGAAATTTATGACAATCTTGCGTGCATCTGGAATAAACTCAACTTGGAATATGATGTCACGATTGTAGATCAGGGTGCAGTAGACATGAAGCCATATTTATTTGGAGCTCTTTTTAAAGCattgcaaaaaatattaaatgattCCGCCTTCAATTGGAATAGTTGTATAAGTAATTTGCATAAATTacctaaaaattttaattttagtaagTTTACTGAACTTACCAAAACAGATGATTTCAACTATTGGCTAACAGAACCAGATGTCCTTGATATATTATTAGTTGAAATGTGGAAATGTGATTATTTACCATTGATATTAAGTTCAGATTGCGATATTTCCATACTTAAAAAATACCAACAATTAAAGAAGAAATTTATTGTGCTGGATAAAAGCCGCAACATCTCCAAGAATATTTCTTCTTTTGGATTAAGTGTATGTACGAACGTGGGCGATATTAAAAACGACTCCTTACGAACTGAATTACTAAACGGAATACAAGTTTCTTTGCAAGGACGAAAACCTGTTACATTTGCAAATATTGTGGACAATTATAAAAACATAATGACTGAGATCAGATTTTCGCagttattgaatttaatgaagaaaaCTTCCAAAATATTTGTTAAAAAGCAATGTCTTGAACATAATAGTTCAATGGTCTTCATTATCAGCCACGATTCGAAGTCTAAGAAAGAAGCAAGTGAGTATTGGAAATCTAACCTTGAACTAGATTTAAAGACAAGACTTGAAGAAGAAAGTATTATAATAAATTGTACATCATCTGAAGTGGGAAACTTAATTGAGTTAATGGGAAACAATCCTGATTTAAAAAACCATTCAATataccatttaaaaaaacaagatCCCACTGGAAAGCTAGAATATTTGGACGGCGACTTGGTGAAAATAAAGCATTTTTTAACTGACGAGAATGAAAATAATCTATATTTTCACCAAGGAAAATTAACACCAATTATTGGGGCAAAGATATGGAAGGAAGAAGAACAATATATACCAAGATACTTGCGTAAAGCAACAATTCAAAAGTCGTTCCTTGACATTGAAGAAGGACGGATTATACTTCTGAATGGTGAAGTGGATTCACTTGAATTGAATATTAAAGAGAAAATAATTCACGAATTTTCTGGTGATATTAAAACTCAAgtgaatgaaaaattaaaaaagaagaaaagtGCTCTTGTTGCTGTTGATCATGAAGATTTTGAGAATTATTGGTGCACGTTGTGTTCCGATAAATATCCAGCATTTCATGTAGAAGTTAGTAATGATTCCTTTGATGACGCCTTAATGGCACACCAGAAAAATGCGATGGAATTTATGAAAATCACTGACCAGAAAAACGTACGCGTGATAGTCACTTGTACACCCATAGCTGAGAGTACACtaatcaataattttgaagtCCAACCTACTCGACTAGAATACTTGCAAAAATGTTCTGCTATTAAATATCTACGTAGAAAATTAGATGATGATGCAATTATCAAAAATATTCCGGACGAGTTTTTGCAAAATCCAAGGTATTTGAAATGTTTGACAGAGTCACCAAAGGAAGATTTTGTACGAAGCATTTCGAATAACACATTCCATTTATTCATGAGTGCTTTTGAAaagagtaaaaataaatatattacaccTTTACATTTATATGCCCAAGAAGGAAAAACAAATATTGTTGAAACACTATTAAAAAAGGGAATGAACATTAATTTGAAAGATTCCAATGGATATACGCCTCTGTGTTGGGCAGCATATATGGGACATTTAGAGACAATAGAAACATTGATAAAAAATGGAGCCGACATTTatattaaagataaagaaaataatacagcTTTACATTTGGCTGCGCAAGAAGGAAAGACAAACATCGTTGAAGAATTCTTAAAACACGGCATGGATATTAATTTAAAAGGATTTTATGATAGAACTTCGTTGTCTATAGCGGCATATAATGGGCAAAAAGACACTATGATGGCATTGTTAGAAAATGGAGCTAATCTTGATGTGAGAGATAAGGACAGTAATAGCGCATTACATCTAGCAGTGATGGCAGGGGAATACAACACAGTTcaggaattattaaaaaatggaATGGACGTTAACTTAAGAGGTTTTATGGGAAGATCCCCTTTGTGCATAGCAGCATATGAAGGCCAAATAGACTCTCTGAGAGTATTATTAGAAAACGGAGCTAATGTTGACTTTAGAGATATAGAAAACAATTCCGCTTTACATCTAGCTGCAGCTAAAGGACATTCTGATATTGTTAAAGAATTGTTGAAGAGAGGAATGGATATAAACTTAAAAGGTTTTATGGATAGATCACCTTTGAGTATAGCAGCACATGAAGGAAAAATAGACACCCTGAGAGTGTTAATAGAAAATGGAGCTAATCTTGAAGTCAGAGATGAAGCAAGTAATACCGCTTTACATTTAGCTGCAAAGAAAGGaaaagtcgatattgttaaagaatttttaaaaaaaggaatGGACGTTAATATAAAGGGTTTTAAAGAAAGGACCCTTTTGTGCATGACAGCACAGGAAGGTCAAGTAGGCACATTGAGAGTGTTATTAGAAAATGGAGCTAATCTTGAATTCAGAGATGAAAATAATAATACAGCTTTACATTGGGCTGCGTGGGCAGGGAATTCTGATATTGTTAAAGAATTATTAAAGAAGGGAATGGATGTAAATTTAAGAGGTGTTAAAGGTGCATACGCTTTATGTATGGCAGCACATGAAGGACGAATAGACACTCTGAAAGTGTTATTAGAAAACGGAGCTAATCTTGAAGGCAGAGATGCAGAAACTAATAACGCGTTACATATAGCTGCAGAGAAAGGaaaagtcgatattgttaaagaATTATTGAAGAAGGGAATGGATGTAAATTTAAGAGGCTTTATGGATAGATCACCATTGTGCATGGCAGCAAGTGCTGAACAAATACACACTCTGACAGTGTTACTAGAGAATGGAGCCAATCTTCAATTCAGAGATGAAAATAATAATACAGCTTTACATTGGGCTGCGTGGGCAGGGAATTCTGATATTGTTAAAGAATTATTGAAGAAAGGAATGGATGTAAATTTAAGAGGTGTTAAAGGTGCATACGCTTTATCTATGGCAGCACATGAAGGACAAATAGACACTCTGAAAGTGTTATTAGAAAATGGAGCTAATCTTGAAGGCAGAGATGCAGAAGCTAATACCGCGTTACATACAGCTGCAGAGAAGGGaaaagtcgatattgttaaagaATTATTGAAGAAGGGAATGGATGTAAATTTAAGAGGCTTTATGGATAGATCACCATTGTGCATGGCAGCAAATGCTGGACAAATACACACTCTGAGAGTGTTACTAGAGAATGGAGCCAATCTTGAATTCAGAGATGAAAATAATAATACAGCTTTACATTGGGCTGCCTGGGCAGGGAATTCTGATATTGTTAAAGAATTATTGAAGAAGGGAATGGATGTAAATTTAAAAGGTTTTAGGGATAGATCCCCTTTGTGTATGGCAGCACATGAAGGACAAATAGACACTCTGAGAGTGATATTAGAAAATGGAGCTAATCTTGAAGTCAGAGATGAAGAAAGTAATACCGCTTTACATATAGCTGCAAGGAAAGGAAATGTGGATATTGTTAAAGAATTGTTGAAAAAGGGAATGGATGTAAATTTAAAAGGTTTTATGGATAGATCTCCTTTGTGCATGATAGCACTTGAAGGACAAATAGACACTCTGAGAGTGTTATTAGAAAATGGACCTAATCTTGAAGTCAGAGATGAAGAAAGTAATACCGCTTTACATATAGCTGCAAGGAAAGGAAATGTGGATATTGTTAAAGAATTGTTGAAAAAGGGAATTGATGTTAATTTAAAAGGTTTTCAAAAATGTACACCTTTGAGCATGGCAGCACGTGACGGTCAAATAGGCACATTGAAAGTGTTACTAGAAAATGGAGCTAATTTTGAATAcagaaatgaaaataataatacagCTCTACATTTAGCTGCCTGGAAAGGaaattttgatattgttaaaGAATTATTGAAGAAGGGAATGGATGTAAATTTAAAAGGGGTTAAAGGTGCAAACGCTTTGTGTCTGGCAGCACATGAAGGACAAACAGACACTCTGAGAGTGTTATTGGAAAATGGAGCTAATATTGAAGTCAGAGATGCAGAAGCTAATACCGCGTTACATATAGCTGCAGTGAAAGGAAAGGTCGATATTGTTAAAGAATTATTGAAGAAGGAAATGGATGTAAATTTAAGAGGCTTTATGGATAGATCACCATTGTGCATGGCAGCAAATGCTGGACAAATACACACTCTGAGAGTGTTATTAGAAAATGGAGCTAATCTTGAAGTGAGAGATGAAGAGCATAATACCGCCTTACACTGGGCTGCCTGGAAAGGATTCTTTGATATTGTTAAAGAATTGTTGAAAAAGGGAATGGATGTAAATTTAAAAGGTTTTATGAATAGATCCCCTTTGTGCATGGCAGCACATGAAGGACAAATAGACACTCTCAGAGTGTTATTAGAAAATGGAGCTAATCTTGAAGTCAGAGATGAAGAAAGTAATACCGCTTTACATTTAGCTGCAATGAAAGGAGAAGTTGGTATTGTTAAAGAATTATTGATAAGGGGAGTGGATATTGATATAAAAGGTTGTAATGATAGAACTGCTTTATGCATGGCTGCGTACAAGGGACAAATAGATACTCTGAGAGTTTTGTTAGAGAATGAAGCTAATCTGCAACTGaaagataaagaaaataataatgctCTACATTTAGCTGCAGCGGAAGGAAAATACAACATTATTCAAGAACTATTGAAAAATGGTATGGATATTAACTTGAGAGGTTGTAATGATAGAACCTCATTGTGCATAGCAACATATCAAGGACACATAAACACTCTAAGAGTATTGTTAGAAAATGGAGCTAAACTTGATATCAAAGATCAAGAAAATCATACCGCTTTAGACATAGCTCTTCTAAACGGAAGAACAGATATTGTTGAAATATTAAAGAATGAAGCTAATCTGCAACTGaaagataaagaaaataataatgctCTACATTTAGCTGCAGCGGAAGGAAAATACAACATTATTCAAGAACTATTGAAAAATGGTATGGATATTAACTTGAGAGGTTGTAATGATAGAACCTCATTGTGCATAGCAACATATCAAGGACACATAAACACTCTAAGAGTATTGTTAGAAAATGGAGCTAAACTTGATATCAAAGATCAAGAAAATCATACCGCTTTAGACATAGCTCTTCTAAACGGAAGAACAGATATTGTTGAAATATTAATTTTGCGTTCGGCTGGTTCTGCTACAGGTTTGAGTTCGGCTGGTTCTGATGCAGAATGCACTAAAGAAAATCCCTGTCCCTACGAGGGTAAGGAACCTGTAACAGATAAACTGTCTTTGCAGGGAAGGCCTATTTTTGATGATTCGAATATTGTTGTAAATACAGATTCGTTTTTTCTTGATCCAGTTGATGAATATGAGGTGACTGAGATTGTAAAAAATCTCAAACATACTGATTCCTTTGGATATGATGGTATTAGTACTAATATATTAAAGCAATGCTTTCAGGAGTTAGTAACTCCATTGACCACTATAATAAAGAACTCATTTAAAGAAGGTATATTTTACACGGAGTTTAAGATCGCTAGGATTAGGCCTCTGCTAAAAGGAGGATCAAGTTTGGTAATCGATAACTATCGGCAGTTATCTGTCTAA
Protein Sequence
MQVNIGKLNPGIDYQFKVITYTAVRLSENPDVDNFLIYTNRDEVPGFDDIVVKVWYKSQPKPFAYLGQIKHRSRNINLNNSKNNIKKYRDQMEAIFVEKNKNLFLQELFTNVPHENVEFWFLCTKYVENTQTHEPIIVKKVHYDVIPNAIYKSMFSFTKDAGCYKLTPIGTIKGPVYFDRFRLFLNQPDINEINEHILKCDEKTFTKETTTKIIAYVTDYFQTPNGLQGLGKRVFQIQLLSICLSLFMIPPTEAIEIYDNLACIWNKLNLEYDVTIVDQGAVDMKPYLFGALFKALQKILNDSAFNWNSCISNLHKLPKNFNFSKFTELTKTDDFNYWLTEPDVLDILLVEMWKCDYLPLILSSDCDISILKKYQQLKKKFIVLDKSRNISKNISSFGLSVCTNVGDIKNDSLRTELLNGIQVSLQGRKPVTFANIVDNYKNIMTEIRFSQLLNLMKKTSKIFVKKQCLEHNSSMVFIISHDSKSKKEASEYWKSNLELDLKTRLEEESIIINCTSSEVGNLIELMGNNPDLKNHSIYHLKKQDPTGKLEYLDGDLVKIKHFLTDENENNLYFHQGKLTPIIGAKIWKEEEQYIPRYLRKATIQKSFLDIEEGRIILLNGEVDSLELNIKEKIIHEFSGDIKTQVNEKLKKKKSALVAVDHEDFENYWCTLCSDKYPAFHVEVSNDSFDDALMAHQKNAMEFMKITDQKNVRVIVTCTPIAESTLINNFEVQPTRLEYLQKCSAIKYLRRKLDDDAIIKNIPDEFLQNPRYLKCLTESPKEDFVRSISNNTFHLFMSAFEKSKNKYITPLHLYAQEGKTNIVETLLKKGMNINLKDSNGYTPLCWAAYMGHLETIETLIKNGADIYIKDKENNTALHLAAQEGKTNIVEEFLKHGMDINLKGFYDRTSLSIAAYNGQKDTMMALLENGANLDVRDKDSNSALHLAVMAGEYNTVQELLKNGMDVNLRGFMGRSPLCIAAYEGQIDSLRVLLENGANVDFRDIENNSALHLAAAKGHSDIVKELLKRGMDINLKGFMDRSPLSIAAHEGKIDTLRVLIENGANLEVRDEASNTALHLAAKKGKVDIVKEFLKKGMDVNIKGFKERTLLCMTAQEGQVGTLRVLLENGANLEFRDENNNTALHWAAWAGNSDIVKELLKKGMDVNLRGVKGAYALCMAAHEGRIDTLKVLLENGANLEGRDAETNNALHIAAEKGKVDIVKELLKKGMDVNLRGFMDRSPLCMAASAEQIHTLTVLLENGANLQFRDENNNTALHWAAWAGNSDIVKELLKKGMDVNLRGVKGAYALSMAAHEGQIDTLKVLLENGANLEGRDAEANTALHTAAEKGKVDIVKELLKKGMDVNLRGFMDRSPLCMAANAGQIHTLRVLLENGANLEFRDENNNTALHWAAWAGNSDIVKELLKKGMDVNLKGFRDRSPLCMAAHEGQIDTLRVILENGANLEVRDEESNTALHIAARKGNVDIVKELLKKGMDVNLKGFMDRSPLCMIALEGQIDTLRVLLENGPNLEVRDEESNTALHIAARKGNVDIVKELLKKGIDVNLKGFQKCTPLSMAARDGQIGTLKVLLENGANFEYRNENNNTALHLAAWKGNFDIVKELLKKGMDVNLKGVKGANALCLAAHEGQTDTLRVLLENGANIEVRDAEANTALHIAAVKGKVDIVKELLKKEMDVNLRGFMDRSPLCMAANAGQIHTLRVLLENGANLEVRDEEHNTALHWAAWKGFFDIVKELLKKGMDVNLKGFMNRSPLCMAAHEGQIDTLRVLLENGANLEVRDEESNTALHLAAMKGEVGIVKELLIRGVDIDIKGCNDRTALCMAAYKGQIDTLRVLLENEANLQLKDKENNNALHLAAAEGKYNIIQELLKNGMDINLRGCNDRTSLCIATYQGHINTLRVLLENGAKLDIKDQENHTALDIALLNGRTDIVEILKNEANLQLKDKENNNALHLAAAEGKYNIIQELLKNGMDINLRGCNDRTSLCIATYQGHINTLRVLLENGAKLDIKDQENHTALDIALLNGRTDIVEILILRSAGSATGLSSAGSDAECTKENPCPYEGKEPVTDKLSLQGRPIFDDSNIVVNTDSFFLDPVDEYEVTEIVKNLKHTDSFGYDGISTNILKQCFQELVTPLTTIIKNSFKEGIFYTEFKIARIRPLLKGGSSLVIDNYRQLSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-