Aque022554.1
Basic Information
- Gene Symbol
- JARID2
- Assembly
- GCA_032357855.1
- Location
- JAUELO010000299.1:445075-489805[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4 9.8e+04 -3.9 0.1 61 82 157 175 135 176 0.62 2 2 2.4e-22 5.9e-18 67.4 0.0 6 89 1413 1494 1409 1494 0.94
Sequence Information
- Coding Sequence
- atggtatTGAATCgaaatgataaaagaaaaagaaaagaaggagaTCTCGTGGACCTCATGGACCCCGTCTCAGAATCACCGAAAAGgacaAAAGTTCACGCTCAAAGAAAATTCGCACAAGGTGCACCAACAAATTACAGCCCGGCGAGTACGCctgttaaagaaaaagaaaaatctaagcCACCTGTTATCACTGAATTGATAACTCATAAACGTCCAAACACAGAAGATTTCCTGACATTCCTTTGTTTTAGAGGAACTTCAATACTCCCTccgagtttgaattttttcaacgtcagtacaaagaaagaaaaaacagaaacGAAATCGACGAAAGCTTCCAGGTCTACTCCTTCCAGCTCTAAAGCAACGCCTTCCGATTCCTCGAAATCCAACTCGACTCAAAAAGCAACTAAGTCAAAAAGCAGTGCCTCCCTCAAGAAAGAATTTcccaagggaattcaaaagacaattaaatttaaGGCAAATACCTCAACAGCTCAAGCGTTGAAGAAGAAATATCTGGAGCAGCGGCTTGCCAAGCAACGAATTAAAAACAACGTCAAGGCTGCCTACGTTATAAGAACTCGATCCTCCACAGAGCAAAATAAAAGTGTCTCTCCTAAAATTGCTGCAAAAATTAAGCGATCTCCGATGAAGCCCAAAAAGAGAGTTCTTGCCAAGAGCAAAAGTAACTCTTCTAATTCGGAATTTTCCGATGATGAGGAGCTGAAATCTTCCCAAGGGAAGAAAGTAACGAAACCTGTACCTAAGAAGGTTTGCACGAGGAATAAATCGGATCTGAGAAGAGTGACAAGATCTTCCGTAGATACGAAATCACCTCAACATCTTTCGAGACGACCGACGAGGAAGACGAAGGAAGCCGCGGCTGTTTATATGGAAATCTTGGGTCGGAAACTAGTCAGTCCTGAGTTGGAAAACGATGAGGATAATATTTCCCTTGATAGCTTTCCAGAATTGCCAAATGCTCGCAGGTCTTTGAAGGAGGAGATCGAGATCAAGGCGAAAGTGAAACAGAATGCAAAGTTTGTTGCCAAAGAGAAGGAGGGTAAAGGAATTCCTGTGAGTAGTAAAAAGGTCGAGAGGATCGAGAAGATCGAGAAGATCGAGAAGCTTCGGGCTGTGAAAACGGTTTTAAAGAGCAAGAGGCTTGTGAAGATTCACAAGTATTGTGAACTCGAGTCTGAAGAGGAGTCAGAGAGTTCGACCGATAGTGAGAAAAGTAGCGAAGCTAGGCCGATGACGAGGAGGAGATTGAATAAGGTGAGTAAACCTGCAAGTAGAAGTTTGAGATCTTCTTCGAGGAATATTCCCGTGAAGGTGGAAGTCCAGAGTTCAGAGGTAAAGAAGGAAGTCAGTAAGGAGAAGGAGAAGCTTTTAGTCAAGAGGAAACGAGAGGTGtttgagaaaaagaaagaagaaggaaaggAAAATAGTAAAAAGGACGAGGAAAAGAATGAGGATAGAGTTAAGGAAGAGAGCAAAAAAGATGAAGGTGTCCAGGGAGATAGTAAAAAGGAGGATTTGAAAAGTGATAGCAAGAAGGAAGAAACTACAAAGACtgatattaaaaaagaagaaccCATAAAAGGAGAGAGTAAAAAGGACGATACTAAAAAGGatgatacaaaaaaggatgataCGAAAAAGGATGATACGAAAAAGGATGATACTAAAAAGGATGATACTAAAAAGGATGACACTAAAAAGGATGATACTACAAAGGAAGATACTAAAAAGGAGGAAGTTAATAAGATTAAAAAGGAGGAAACCAAGAAAGAAGAAGTTAAAAAGATAGTTAAGAAAGAAGAATCCAGAAGTGAAAGTAAAGGTGATTCTAAGAGTGAAACTAAAAGTGATTCTAAGAGTGAAACTAAAAGTGAAACTAAAACTCTAAATAAGAAAGATACTAAAACAGAAACTCCTGATGTTGAGAATGTAGAATCAGATGAGGAAACCCTTGGTTCGCTTctcattaaaatgaaaaagaagaaagatgCCGATTCTCTGAAGAAGACGGAACAAAACAAGACAAAAGTTCTCAAAGAAGTTAAGGATCCAAAAATATCCGATGATGAAGAAGCGTTCAGAGGTTTTTCGAAAAAGGCAATTTCGAGTGTTTTAGATTCGTGCCAATCTCACGCGAATGCGAATCTCCTAGTTTCCGAAGAAGAAATAAAATCTGCAGTTGAAATATCATCCCCTGAACGACTGGAATCATCTCCTGAGGTAAAGGATGATACTCTGATTATAGAGCAAACTCCAATTATTCCCGTTGTCAAACCAGCTcctgaaattaaaatcttgactCCGAAAGCTGGATCTCCGAAACAGGATAAAACCTATATTCACAAATCTGAGACTGACCCGAATATAATTGACATGCCATCGTCAGCGGCTCTTGGAAGAAAGGAGAGAGTAAATATGTCGACTGCGCAAATAGAAAAGTGGCTGGATGAGAGTTCACTTGCGAAAGAGGAGAGTAAAGTTGAAATGGAAAACGTTACTAGTTTTCAGTACGAGACGGCTGAGAAGCCGAAAGTCTCCACGCATCATTTATCCATTTCCTCGAAGGTTCAACACTTAGTGAGGCCGGTGAATGTCACTCTTGCAAAATTGAATGATAAAAAGGGTAAGCCCTCGAATTTGGCAGTTTTAAACCCACAAATGAGTGCGATTAGGCATCCGAGCACTTTGCTGGCTGTGAAGAATAAGCCAGTTGAAGTCGAGCCAAAACAACCAGTTTTGGTAAGCAAACCTCAACCCCCGAAGGTGAGCAAGGACTCTCCGAACGCAGAAGATAGTGATGCGGTTTCCAAATCGGACCAAAATTCTCTCGACGGTTCCCCAGATAAGAAGAACCTTGAAAAGAAAATTCTCTCCCAACCGaggaaattatttttaccaaaggTAAAGGAGAGGAAGGTCGCAACTCCAAGTGCGAATGCTTTTTCCCCAGAGAATGAAAGTAGTGTTTATGCTTTTGAAAGTGATACGGAAGTTCCGGTAAGCACCCCTTTTAGGAGAAAAAGCAAACCAGCTTCGCCTTTGGTAAAAGGTCAAGATGAAAAAAGCAGTAAAGATAATCCTAATAAGGATAGCAATGATACTCCGAGTTCTGAATTGTCCGGAGTTGAGAATTTCAAAGTCCCTGAAGCGAAGAAAGAGACGGAAACTCAGATAGCGCCGACCAAGATGAACACGATTGATTTGAAGAGTTTTACTAATTTGGCTAATATGCAGGTTCTTTCTCTGGACAAGCTGACGACTAATTGGAGCAATGTTAATTGCAGTGCGTCTATTGCTGTCCAGGTGAATTTAGATGAAcagaatcaagttcaaaattcagaAGTTGATGAAAATGGACAGCAGAAGGGTACTGAAATATCTACGCAAACTGAGGGGTCGAATGACAATGACGACGATAATGATGGACAGCTATTTTATATTCCTTTGCAAGCGGTCACGAGGAATGGGTCGGTGCAAGGTCATCAGCTGATACAAGGAGTGGCTGTGAAATTGGGAACGGAAGGACCAACTGGACCGAATCAGAGAGTTTTGTTGAAGGCTAAACTTGTGACGAAACCACCTTTGAATGTGGCCAGGGTTCCTCCTGTGGGAACTGTTCAACCAACTGCTAGAGCTCCGCCGATTGCTTCGACTTCTATTGCAGAGCATCCAATGCCTTCGACTTCATCGGCAGTTCCTGTACCCTCGACTTCTGAAATTCGAGGTGTCGTGGTTCATAAGGAGGAGAATTTAAATCAGGTCGGAAATATTCGTAGGGAAACTGCTACGAGTTCAACTGGAGTCGAGAAGGCTGAGAAGGTTTTGAAGTCTCCTAAGACACCCAGGGAGAGGAAGATTTCTATCGATTCCGGAAAACCTTCCAAGAGGTCCCAAGGAAAGTCGAAGCAGAAAACTCTGGAAATCTGTTCACCAACAAACTTGACGACCTTCCCAGGAACAAAGGATCCAAACGAAGAGGCTCGTCTCGTAGAAGCTCCGACCTTCCACCCTACCGAGAAAGATTTCCAGGATCCTCTCGAGTACATCGACAAAATTCGACCCATCGCCGAAAAATTTGGTATCTGTCGTGTCGTTCCTCCTGGAAACTTCAAACCAGAATGCAAAGTCTCCGACGATATGAGATTCACAGCTTACAACCAATACGTCCATCGAATGCTCCACAGATGGGGACCCAACGTGAAAGAAATGATGGCCATCAGAAAATACTTAGCCACCCAGAGTATAACTTTGAATCATCCACCCTGGATCGGAGGAATGGAAATCGACCTTCCTCATTTGTACCAAACAGTCCAAAGCCTCGGTGGTTTGAAAGAAGTGATCGAAAAGAAGAAGTGGCAGAAAGTATCAGATGGTATGAAAATCCCCAGGTCTGCTCAGGATCGAGTCACCAAATTGGACGATATCTACTGCAAGTATTTATTGCCATATGATACACTTTCTCAGACGGAGAGAGACAAACTCTTCGAGGAAGTGGAGTCGGAATGGAAGCATCGGGAAGCCAAAGCATTGCGGAGattggaaactcagtcgaatgaTAACGAAGAGGAAGAGGATGATGATAGTTCTGATGAAATAGAAGAGTGTATTGTTAAGGGACGAAATATGCCTCTAAATGCTTTCTATCGAATCGCTAGAAACACTCAGAGAATGTGGTTTTCGGAGAATCAGAGATCAGGAAATGAAGCTGAAGGAGCGTCAGCTTCGGAAGTTGAGGCTGCTTTTTGGAAGCATGTTGCTGAGAAGAAACGCCATGTTTGTGTTCACGCTGCTAGTATTGATTCCAGTGGGAGAGGATTTGGATTCTCTGTTGCTAAGAATAGTCCGTGTGCGAGACATCCTTGGAATTTAAAGGTCCTGACTAATAATGCCGGGTCTGTGCTGAGAGCTATGGGTCCCTTGATGGgtGTGACCGTGCCGACTCTACACGTTGGAATGCTTTTTAGTGCTTGCTGCTGGTATCGAGATCCGCATGGACTTCCCTGGATCGAATATTTGCACACTGGAGCGAAAAAAATTTGGTACGGGATTCCCGATGAGcataacaataatttcagaaatgctCTCTCAAAAATGGTGCCGcgttattgcaaaaataaaaaaatttggctgCCTTCTGATACTGCCATGGTGCCTCCGGAAATGCTCGTGAGAAACGGGGTTCCCTTGTGTCAAACGGTCCAGGAACCTGGACAATTTATCGTCGTTTTCCCTAAAGCTTTCACTTCGAGTATTTGTACTGGTTATGTCGTTTCGGAAAGCGTCTATTTTGCACAGTCCTCTTGGCTTGAAACTGCTGAACAAGTTTTTCAGATCTTGCCAACAGTGAAGAGGGTATGTGAAAGGGAAATTGATTATCGCAGACAGTTGAAGAGTCTGGGGCTAACAAATACGGAAAAATTGCCAACGCCGGAAAGTGGAAAACGAGGAAAGGgcaaaaaagtaaaagaagagGATGGCGATTTCGAGTGCGAAACTTGCCGGGCTAGTTTGTTTGTTTCTTTGGTCAGCAATCCATTAGATGATGGCATGTTTTGCCTTCCCCACGGGATCCAGCTTTTGACAAGGAAAAAACATCTCTTGAAAAATTGCCTTCTAATGATCACGTACAGCGAGggtGACCTGGACGATTTGATCCACAAATTGGAGGACAGGATCGAAGCAAAATCGAAGAAAAGCAattcttacaaacaaaataaGTAG
- Protein Sequence
- MVLNRNDKRKRKEGDLVDLMDPVSESPKRTKVHAQRKFAQGAPTNYSPASTPVKEKEKSKPPVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVSTKKEKTETKSTKASRSTPSSSKATPSDSSKSNSTQKATKSKSSASLKKEFPKGIQKTIKFKANTSTAQALKKKYLEQRLAKQRIKNNVKAAYVIRTRSSTEQNKSVSPKIAAKIKRSPMKPKKRVLAKSKSNSSNSEFSDDEELKSSQGKKVTKPVPKKVCTRNKSDLRRVTRSSVDTKSPQHLSRRPTRKTKEAAAVYMEILGRKLVSPELENDEDNISLDSFPELPNARRSLKEEIEIKAKVKQNAKFVAKEKEGKGIPVSSKKVERIEKIEKIEKLRAVKTVLKSKRLVKIHKYCELESEEESESSTDSEKSSEARPMTRRRLNKVSKPASRSLRSSSRNIPVKVEVQSSEVKKEVSKEKEKLLVKRKREVFEKKKEEGKENSKKDEEKNEDRVKEESKKDEGVQGDSKKEDLKSDSKKEETTKTDIKKEEPIKGESKKDDTKKDDTKKDDTKKDDTKKDDTKKDDTKKDDTKKDDTTKEDTKKEEVNKIKKEETKKEEVKKIVKKEESRSESKGDSKSETKSDSKSETKSETKTLNKKDTKTETPDVENVESDEETLGSLLIKMKKKKDADSLKKTEQNKTKVLKEVKDPKISDDEEAFRGFSKKAISSVLDSCQSHANANLLVSEEEIKSAVEISSPERLESSPEVKDDTLIIEQTPIIPVVKPAPEIKILTPKAGSPKQDKTYIHKSETDPNIIDMPSSAALGRKERVNMSTAQIEKWLDESSLAKEESKVEMENVTSFQYETAEKPKVSTHHLSISSKVQHLVRPVNVTLAKLNDKKGKPSNLAVLNPQMSAIRHPSTLLAVKNKPVEVEPKQPVLVSKPQPPKVSKDSPNAEDSDAVSKSDQNSLDGSPDKKNLEKKILSQPRKLFLPKVKERKVATPSANAFSPENESSVYAFESDTEVPVSTPFRRKSKPASPLVKGQDEKSSKDNPNKDSNDTPSSELSGVENFKVPEAKKETETQIAPTKMNTIDLKSFTNLANMQVLSLDKLTTNWSNVNCSASIAVQVNLDEQNQVQNSEVDENGQQKGTEISTQTEGSNDNDDDNDGQLFYIPLQAVTRNGSVQGHQLIQGVAVKLGTEGPTGPNQRVLLKAKLVTKPPLNVARVPPVGTVQPTARAPPIASTSIAEHPMPSTSSAVPVPSTSEIRGVVVHKEENLNQVGNIRRETATSSTGVEKAEKVLKSPKTPRERKISIDSGKPSKRSQGKSKQKTLEICSPTNLTTFPGTKDPNEEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPGNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIRKYLATQSITLNHPPWIGGMEIDLPHLYQTVQSLGGLKEVIEKKKWQKVSDGMKIPRSAQDRVTKLDDIYCKYLLPYDTLSQTERDKLFEEVESEWKHREAKALRRLETQSNDNEEEEDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFSENQRSGNEAEGASASEVEAAFWKHVAEKKRHVCVHAASIDSSGRGFGFSVAKNSPCARHPWNLKVLTNNAGSVLRAMGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFRNALSKMVPRYCKNKKIWLPSDTAMVPPEMLVRNGVPLCQTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQSSWLETAEQVFQILPTVKRVCEREIDYRRQLKSLGLTNTEKLPTPESGKRGKGKKVKEEDGDFECETCRASLFVSLVSNPLDDGMFCLPHGIQLLTRKKHLLKNCLLMITYSEGDLDDLIHKLEDRIEAKSKKSNSYKQNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00200536;
- 90% Identity
- -
- 80% Identity
- -