Basic Information

Transcription Factor Domain

TF Family: CSL
Domain: BTD domain
PFAM: PF09270
TF Group: Beta-Scaffold Factors
Description: Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 0.45 2.2e+04 -2.1 0.1 77 99 72 95 57 113 0.59

2 2 1.2e-65 6.1e-61 206.3 0.0 1 123 181 303 181 303 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	0.45	2.2e+04	-2.1	0.1	77	99	72	95	57	113	0.59
2	2	1.2e-65	6.1e-61	206.3	0.0	1	123	181	303	181	303	0.99

Coding Sequence: CAGGATCAAAGACTGACACGTGAAGCTATGGAGCACTACTTGCGCGATCGAAGTGACATGGTGATTGTAGTTCTGCACGCCAAAGTCGCCCAGAAATCTTACGGCAACGAAAAGAGATTCTTTTGCCCTCCACCCTGTATTTATCTTTTCGGTGACGGATGGAGAATGCGACAAGAACAGTTGCTCCGAGAGGGAGAATCTGAACAGTCTTCACAGCTCTGCGCCTTCATCGGGATCGGTAATTCTGACCAGGACATGCAGCAGCTTGATCTCAGTAATAGAAAGCAGTACTGTGCTGCAAAAACATTACACATCTCAGACTCTGATAAGAGAAAAAACTTCATGCTGTCTGTGAAGATGTTCTTTGGTAATGGTCATGATATCGGCGTTTTCCACAGCAAGCGGATAAAGGTAATATCGAAGCCATCCAAGAAGAAGCAGTCCTTGAAGAACACAGACCTGTGCATCGCGAGTGGGACTAAAGTAGCTCTCTTTAACCGTCTGCGGTCGCAGACAGTCAGCACGAGATATCTACATgtggaaaatggaaattttcatgCCAGTTCGACGCAGTGGGGAGCGTTCACGATCCATTTACTAGATGACGACGAGAGTGAGTCAGAAGAGTTCGAGGTCAGAGATGGTTACGTTCATTATGGCAGTACAGTAAAACTCGTATGCTCAGTTACTGGTATGGCACTACCTCGACTTGTCATTCGCAAAGTCGACAAACAAATGGCAAGTTTAGAAGCCGATGATCCTGTTTCGCAGTTGCATAAGTGTGCCTTCTACATGAAGGACACTGATCGCATGTACTTGTGTCTCTCGCAGGAaagaatcattcattttcagGCGACTCCCAGTCCAAAGGAGGTAAACAAGGATTTGATTAATGATGGTGCCTGCTGGACGATTATCAGCACTGATAAAGCTgagtataaattttttgaaggcATGGGTCCCGTGCGTTCGCCTGTGACTCCAGTGCCGCTCGTTCATAGTCTGCATCTCAACGGTGGCGGCGATGTGGCAATGCTGGAATTGACTGG
Protein Sequence: QDQRLTREAMEHYLRDRSDMVIVVLHAKVAQKSYGNEKRFFCPPPCIYLFGDGWRMRQEQLLREGESEQSSQLCAFIGIGNSDQDMQQLDLSNRKQYCAAKTLHISDSDKRKNFMLSVKMFFGNGHDIGVFHSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDDESESEEFEVRDGYVHYGSTVKLVCSVTGMALPRLVIRKVDKQMASLEADDPVSQLHKCAFYMKDTDRMYLCLSQERIIHFQATPSPKEVNKDLINDGACWTIISTDKAEYKFFEGMGPVRSPVTPVPLVHSLHLNGGGDVAMLELT

Sequence clustering based on sequence similarity using MMseqs2