Basic Information

Insect: Amorpha juglandis
Gene Symbol: -
Assembly: GCA_949126905.1
Location: OX421382.1:13898137-13909229[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0084 0.53 11.3 2.4 1 23 296 318 296 318 0.98

2 12 0.015 0.96 10.4 1.1 2 23 326 348 325 348 0.94

3 12 5.6 3.6e+02 2.4 0.4 1 23 352 374 352 374 0.91

4 12 0.00046 0.029 15.2 2.4 1 23 379 402 379 402 0.98

5 12 0.0008 0.05 14.5 1.3 2 23 407 429 406 429 0.95

6 12 0.012 0.78 10.7 0.0 2 20 447 465 447 467 0.94

7 12 6.7e-06 0.00042 21.0 3.0 3 23 481 502 479 502 0.95

8 12 0.029 1.8 9.6 1.2 2 23 522 544 521 544 0.97

9 12 1.5e-05 0.00097 19.9 0.2 1 23 557 579 557 579 0.98

10 12 2.6e-05 0.0017 19.1 1.7 1 23 585 608 585 608 0.93

11 12 0.00084 0.053 14.4 2.0 1 21 614 634 614 636 0.93

12 12 3.8e-05 0.0024 18.6 0.7 1 23 642 665 642 665 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0084	0.53	11.3	2.4	1	23	296	318	296	318	0.98
2	12	0.015	0.96	10.4	1.1	2	23	326	348	325	348	0.94
3	12	5.6	3.6e+02	2.4	0.4	1	23	352	374	352	374	0.91
4	12	0.00046	0.029	15.2	2.4	1	23	379	402	379	402	0.98
5	12	0.0008	0.05	14.5	1.3	2	23	407	429	406	429	0.95
6	12	0.012	0.78	10.7	0.0	2	20	447	465	447	467	0.94
7	12	6.7e-06	0.00042	21.0	3.0	3	23	481	502	479	502	0.95
8	12	0.029	1.8	9.6	1.2	2	23	522	544	521	544	0.97
9	12	1.5e-05	0.00097	19.9	0.2	1	23	557	579	557	579	0.98
10	12	2.6e-05	0.0017	19.1	1.7	1	23	585	608	585	608	0.93
11	12	0.00084	0.053	14.4	2.0	1	21	614	634	614	636	0.93
12	12	3.8e-05	0.0024	18.6	0.7	1	23	642	665	642	665	0.97

Sequence Information

Coding Sequence: ATGGATACGAAAATTAAAGCATGTAGGATATGTTTGATCACAGAGGTTAAAATGTATTACATTGATAATGTTTTGGATTATTACCTATCCTTAATTTCAAATGATgaatCCTACACATATTACCCTAACTACATATGTTACGAGTGTGCATCTCAGTTAATGAAGTTTATAaaatttaggaaaaaatatattgtagcacaATCTATACTTCAAAATATGTTCAAGGAATGTGGTGagATAAAAGAACAAGACATTAAGAGCATAAATGTTTCTACTGTTTTATTGAAATCATGTTTGGGTTATCACAAATTACCTACAATAtcttttagtaaaataaataatatgaatgcgGAGATGACAGCGCATGAAGATACCACATCTGGATATGAGATCAAATCTGATATTGAAGAGAGTGAACCTGATGATGACGATCAAGCCTTAGTTGAAGAGGAAATcgaattaaatattgatatcaaGGCATCTATTGAAGACAACAAACTTTATGATGAGGAtatagctgatgatgatgatgcaggAATACAACTTGAAAATATGAGAACCTCGACTTTAGAGGAGCAATCTAATGCTGATAATCATTTTACTTTTGGCGTTTTTGCCAATGAACTAACAAAAGACGACAAAGCTGATTCACAATTAAAAGCAGCAAAGGAAGTCCAAAAGCAGAAACGAGGGCAGACGAGAAAGCGTGGTGCCGCACCCAGCAAAGCAAAAGAACAAAAGCCGAAACGGACAAAGAACACCAGCCCAACGCTTGAAAACGATATGGACTtgaacaaatattttactatctTCAAATTATCGATGGAGGAACAAATACAGGAATTCAACATGCGCAAGCAGTCATCCAATTATCTGGGCGCACCGTTCCAGTGCAATCTGTGCTTCAGGGGGTTCGTAAGCACGCAGGCATGGAAGCACCATCTCTTGAAACACGATCCTAGCACAGGCGACATAGAGTGTCCTATATGCAAGCTCAGGTTCAAAAGGAAAAACGTTCGAAACAATCATGCCAAAAGAAACCACGAGTTTAAATACATTTGCAAGTCCTGTCCATACATCTCCACGGATAAattACCAGCGAAACAGCATAAGAAGTGGCATGACGGTGTCACATATAAATGTGAACTCTGCAATGTAGTTTTCAAaaaGCGGACATCATATCTAAACCATGTGAGGAAGAAACACCCGTCGGATTGTATTTGCGATGTGTGTGGACACGCGTTCGCCAATCAAAAGGGACTCGTCCAGCACAAAAAAATTATGCATAAAAATGTTACTGAGAAAGTAGGAGACGACGGTGATGCAGAGCAGGGTCCGTACTGCAAGGAATGTGACATCAAGTTCGTATCGGTGGAGGCGTGGAATCGACACATGGTCATCTCCGACAAGCACAAACAGACCGTGCATTTTGAACACTTGTGTCGCGTGTGTGGTAAAACGTTCAAGAATTCAAAAGAGCTGCAGGTCCATCGCCGGAAGGAACACCCAATACTCAAAAGTTACGCATGCCGTAATGACCCTAAGACCATGACCCGGCCTGTCAAGTGCGAACatTGTTCAGAAGAGATCTCCAACCCGCGACAATATTATATTCACTACCGAAAGATGCATCCAAATGAAATTTACCCCCTTAAAAGGAAACACGAGTATATCTGTGATATTTGCGGAAAACGTTTTCCAAACAACGCGGTCCTAGTATACCACAAGCGAACGCATTCTGAAGAGCGTAAGTTCAAATGTGGCACGTGTGGAAAGGCGTTCCACAATAACGGCAACCTGCAGACGCACGTGACGCAGACACACTCCGACCTGCGGCCCTTCCCCTGCGCGCTCTGCAACAAGGCGTTCAAGAACAGGGGCGCACTCAGCAGGCACTCGAGGtGTCACACAGGAGCAAAACCGTACACATGCGAACTGTGCGGCAAGTCGTTCAGTCAGTCAAACAGTCGGAACCTGCACGTTAGCACAGTACACCTGAAGCAACCCCCGCCGCCTCGAGTGCGGCGACGGACGGCTAACAGCCGGACTCCGCCGACACCTGCAACTACTGTCAACACCGACACCGACACTCCTCTTGTGTGA
Protein Sequence: MDTKIKACRICLITEVKMYYIDNVLDYYLSLISNDESYTYYPNYICYECASQLMKFIKFRKKYIVAQSILQNMFKECGEIKEQDIKSINVSTVLLKSCLGYHKLPTISFSKINNMNAEMTAHEDTTSGYEIKSDIEESEPDDDDQALVEEEIELNIDIKASIEDNKLYDEDIADDDDAGIQLENMRTSTLEEQSNADNHFTFGVFANELTKDDKADSQLKAAKEVQKQKRGQTRKRGAAPSKAKEQKPKRTKNTSPTLENDMDLNKYFTIFKLSMEEQIQEFNMRKQSSNYLGAPFQCNLCFRGFVSTQAWKHHLLKHDPSTGDIECPICKLRFKRKNVRNNHAKRNHEFKYICKSCPYISTDKLPAKQHKKWHDGVTYKCELCNVVFKKRTSYLNHVRKKHPSDCICDVCGHAFANQKGLVQHKKIMHKNVTEKVGDDGDAEQGPYCKECDIKFVSVEAWNRHMVISDKHKQTVHFEHLCRVCGKTFKNSKELQVHRRKEHPILKSYACRNDPKTMTRPVKCEHCSEEISNPRQYYIHYRKMHPNEIYPLKRKHEYICDICGKRFPNNAVLVYHKRTHSEERKFKCGTCGKAFHNNGNLQTHVTQTHSDLRPFPCALCNKAFKNRGALSRHSRCHTGAKPYTCELCGKSFSQSNSRNLHVSTVHLKQPPPPRVRRRTANSRTPPTPATTVNTDTDTPLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00063819; iTF_00063844;
90% Identity: iTF_00063819; iTF_00063844;
80% Identity: -