Basic Information

Insect: Amorpha juglandis
Gene Symbol: Znf296
Assembly: GCA_949126905.1
Location: OX421367.1:11902192-11917316[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.005 0.32 12.0 0.9 1 21 163 183 163 184 0.94

2 12 0.02 1.3 10.1 0.3 2 20 198 216 197 216 0.95

3 12 0.014 0.86 10.6 2.3 1 23 259 281 259 281 0.97

4 12 0.042 2.7 9.1 0.1 2 20 387 405 386 407 0.91

5 12 0.00028 0.018 15.9 1.8 1 23 415 438 415 438 0.97

6 12 0.00014 0.0089 16.9 1.6 1 23 460 482 460 482 0.98

7 12 1.3e-07 8e-06 26.4 2.4 1 23 489 511 489 511 0.99

8 12 1.4e-07 8.7e-06 26.3 2.3 3 23 525 545 523 545 0.96

9 12 3.2e-05 0.002 18.9 3.2 1 23 551 573 551 573 0.99

10 12 1.1e-06 6.9e-05 23.5 2.7 2 23 580 601 579 601 0.96

11 12 4.6e-08 2.9e-06 27.8 1.5 1 23 607 629 607 629 0.99

12 12 0.0039 0.25 12.3 0.1 1 23 635 657 635 657 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.005	0.32	12.0	0.9	1	21	163	183	163	184	0.94
2	12	0.02	1.3	10.1	0.3	2	20	198	216	197	216	0.95
3	12	0.014	0.86	10.6	2.3	1	23	259	281	259	281	0.97
4	12	0.042	2.7	9.1	0.1	2	20	387	405	386	407	0.91
5	12	0.00028	0.018	15.9	1.8	1	23	415	438	415	438	0.97
6	12	0.00014	0.0089	16.9	1.6	1	23	460	482	460	482	0.98
7	12	1.3e-07	8e-06	26.4	2.4	1	23	489	511	489	511	0.99
8	12	1.4e-07	8.7e-06	26.3	2.3	3	23	525	545	523	545	0.96
9	12	3.2e-05	0.002	18.9	3.2	1	23	551	573	551	573	0.99
10	12	1.1e-06	6.9e-05	23.5	2.7	2	23	580	601	579	601	0.96
11	12	4.6e-08	2.9e-06	27.8	1.5	1	23	607	629	607	629	0.99
12	12	0.0039	0.25	12.3	0.1	1	23	635	657	635	657	0.97

Sequence Information

Coding Sequence: ATGAGTTCAATCCAATATACACAGGAAGTCAAAATTGAAAAATTGTGCCGTACATGTTTATCGAAAGAAAGTGAATTACATTCATTGTTTGATGTATGTGTCGACACTGTTACTCTTGATTTTATAGTTACCGCAGTTACTGGAATAAAGATTCGTAAGGGTGATGGTCTGCCGTCGACCATATGCTGTGAATGTAGAGAAAAAGCTGTAAAGGCCTATGATTTTAAGACAAAATCGCATGAAGCTGATACATCATTAAAAGAAATCATCAAGAAAGATGCATATACAAATGAACATACTTTACACAGTACATTGTCTTATAAGCCAATTACTACCAGCGTTAAGATTGAACATCTAACCTCAAATGAGCCAGATGATTTCTCCGATATTGAGTATCATGTGCCAATTGATAATGGTCCTGATGACTTCACAGATTTAaatttagAGCCAGTTAAAAACGAAAAGGCACAACAGGCAACTTCTTATTTTGAATGTAAAAATTGTTTCATTGTATTTGAAAGTCGTGACAAGTTAAAAGAACACAATAGGAAGAAGTGTATAAAAGTTGAAATTGAAGATACTACTGGCACATATTGCCCACTTTGTGGAACATGCTATGATGGAGCTGAAAGTCTTTCAAAACATTTGTGGGAGTATCATGCTGAAGTCATGGGACCAAAAAAGCGAGGGAGACCTAAAAAGATGCTAACTAGTACTATATTAGATAAGTTATCAGAAAACGGATTCTATATTACTACTGTCCCagtgaaaaaatatgattgttcTTTTTGCACTGAGCAGTGTTACACCAAAGAAGAATTAGAAAATCATGTGTTGAAACATAAAGCTATGAAAGTATTATGTTGTATTATATGtaagaaaatgtttttaaaacggCAAAGTTTCGAAGAACACACTTGCTCTGAAGAAAAAACAGATGAGATCAAACAAAATCAGGAAAATGTGTCCGATATGCaggccaataaaaataaaatatttaattatctcACTGAAATGTCATTGCAAGAACTTTTGGAGCCTAATTGTGATgtgGAGAATATAAATTTTCTGAAAGTGTGTACCGCCTGCAGTGCTGTGTTTTTGTCGGAAGAGGATCTCATTAATCACCATGACGCGGAACATCCTGAACTTTCGCTCCGATGCAATCTCTGCACCAAGGTATTCGCTACTGTGAAGTCAGCAGCACGACACAGGACGATTTGTAAACAAGTCGAGAGGAATCATAAATGCAGCACGTGTGGCCTTAAGTTTGCCTACGAAATATCGCTTAATAAACACATACTGAGATATCACCAGGGGCAAAGCGTCTCAATCACTTTCACCGATTCCATGACGAAAGAGGTAGAAGACAAGCAATTCCAATGTGATACTTGCAACAGATATTTCTTTCGAAAAGAATTACTCGCGAAGCATGCTAAAATCCATATGCCcaatcaaaaatatttccaGTGTGATATATGTGAAAAGAAATTCACAAGAAAAGACAATTTGAGGTCACACAAACGCATTCATGATCCACACAGAGAGAAAGGACCGACGAACACCTGCTTATGTCTGTACTGTGGTCGCAGTTTCTCGAATTCATCTAATCTTATTGTCCACATGCGCCgtcacacaggcgaaaaaccATACAAATGCGACTTTTGCGGCAAAGGTTTTCCTAGATCATCTGATCTTCAGTGTCACAGGAGATCACACACTGGCGAGAAGCCTTGCATTTGTCGTGTATGTGGCAAAGGTTTCTCTCGCAGTAACAAGCTGACGCGGCACATGCGCGTGCACACCGGCGTGCGTCCGTACAAGTGCACGTACTGCGACAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACATCCGCCGACACACCGGCGACCGGCCCTACATATGCGAAGTGTGCGGTGACAGGTTCATTCAGGGTACTGCTCTACAGAATCATAGACGTGCCCACGGCCATTTTCCAACCGCCCCAGGCGAGGTAGACTCTCAGGTCCAAGGTCTACAGTATTCAGTTCAAAATATAGCTCAGAATAGTCATTAA
Protein Sequence: MSSIQYTQEVKIEKLCRTCLSKESELHSLFDVCVDTVTLDFIVTAVTGIKIRKGDGLPSTICCECREKAVKAYDFKTKSHEADTSLKEIIKKDAYTNEHTLHSTLSYKPITTSVKIEHLTSNEPDDFSDIEYHVPIDNGPDDFTDLNLEPVKNEKAQQATSYFECKNCFIVFESRDKLKEHNRKKCIKVEIEDTTGTYCPLCGTCYDGAESLSKHLWEYHAEVMGPKKRGRPKKMLTSTILDKLSENGFYITTVPVKKYDCSFCTEQCYTKEELENHVLKHKAMKVLCCIICKKMFLKRQSFEEHTCSEEKTDEIKQNQENVSDMQANKNKIFNYLTEMSLQELLEPNCDVENINFLKVCTACSAVFLSEEDLINHHDAEHPELSLRCNLCTKVFATVKSAARHRTICKQVERNHKCSTCGLKFAYEISLNKHILRYHQGQSVSITFTDSMTKEVEDKQFQCDTCNRYFFRKELLAKHAKIHMPNQKYFQCDICEKKFTRKDNLRSHKRIHDPHREKGPTNTCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICRVCGKGFSRSNKLTRHMRVHTGVRPYKCTYCDKAFSQSNDLTLHIRRHTGDRPYICEVCGDRFIQGTALQNHRRAHGHFPTAPGEVDSQVQGLQYSVQNIAQNSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00428364;
90% Identity: iTF_00341540; iTF_00858793; iTF_01010612;
80% Identity: -