Ajug002701.1
Basic Information
- Insect
- Amorpha juglandis
- Gene Symbol
- -
- Assembly
- GCA_949126905.1
- Location
- OX421367.1:7875490-7875993[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-11 4.8e-08 33.0 0.0 4 35 27 59 24 64 0.92
Sequence Information
- Coding Sequence
- ATGTTTGTGTTATTGATTGGTGTGTCAGAATTCCACGGGCATACACTCAAGTTGAAGGCGCCTACTTGGACCCAGAGTCAGCTGCAAGAAGCCATCCAGGCTGTCGTTACCCAACGAATGAGGTTCACCCAAGCAGCGACCCATTACGGCATACCTAAAGGCACTTTATACGATAACATCCTAGGCAAGTCCAAACGAATGGCTGTTTTAGACGAGACTGGGCTGTTAGCTTGTGAGGAGAGGGCCGTGTTAGACTTTTGCTGCGAGACCAGCGTCTCCCCTTACAATAGAAGAACTAAGAAATCGTTAACTGAAGTCTTGGCTTTTGTCGAGACGCTAAGAAGGACAAGGGATCCACATTTCGCGTTTGTTGGGTTAACCGGCTTTCGATGGTGGTGGGCATTCTGTAAGAAGCATTCTATAGTATCTTTGTATTACGAGGGTCCTGTCAAAAGTAAGAACTCCAAAGTCAAGTTAGAAGTTCACGTTAACGATGAATCTTag
- Protein Sequence
- MFVLLIGVSEFHGHTLKLKAPTWTQSQLQEAIQAVVTQRMRFTQAATHYGIPKGTLYDNILGKSKRMAVLDETGLLACEERAVLDFCCETSVSPYNRRTKKSLTEVLAFVETLRRTRDPHFAFVGLTGFRWWWAFCKKHSIVSLYYEGPVKSKNSKVKLEVHVNDES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025190;
- 90% Identity
- iTF_00428929; iTF_01429865; iTF_00341258; iTF_00819084; iTF_01010292; iTF_00819992; iTF_00859391;
- 80% Identity
- -