Ajug006995.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amorpha juglandis
Gene Symbol
DIS3
Assembly
GCA_949126905.1
Location
OX421372.1:6162439-6201773[-]

Transcription Factor Domain

TF Family
CSD
Domain
CSD domain
PFAM
PF00313
TF Group
Beta-Scaffold Factors
Description
In molecular biology, the cold-shock domain (CSD) is a protein domain of about 70 amino acids which has been found in prokaryotic and eukaryotic DNA-binding proteins. When Escherichia coli is exposed to a temperature drop from 37 to 10 degrees Celsius, a 4–5 hour lag phase occurs, after which growth is resumed at a reduced rate.During the lag phase, the expression of around 13 proteins, which contain cold shock domains is increased 2–10 fold. These so-called 'cold shock' proteins are thought to help the cell to survive in temperatures lower than optimum growth temperature, by contrast with heat shock proteins, which help the cell to survive in temperatures greater than the optimum, possibly by condensation of the chromosome and organisation of the prokaryotic nucleoid.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.039 4.7e+02 1.4 0.0 20 40 278 298 267 307 0.81
2 26 1 1.2e+04 -3.2 0.1 31 50 326 345 325 348 0.75
3 26 0.001 12 6.4 0.0 4 54 371 420 369 426 0.81
4 26 0.0012 15 6.2 0.0 23 63 438 479 432 481 0.81
5 26 0.0009 11 6.6 0.0 22 63 475 517 468 519 0.80
6 26 0.0007 8.4 7.0 0.0 22 64 513 556 507 566 0.81
7 26 0.0069 83 3.8 0.0 22 54 551 584 545 590 0.80
8 26 0.0012 15 6.2 0.0 23 63 602 643 596 645 0.81
9 26 0.0083 1e+02 3.5 0.0 23 54 640 672 634 678 0.80
10 26 0.0084 1e+02 3.5 0.0 23 54 690 722 684 728 0.80
11 26 0.0087 1e+02 3.4 0.0 23 54 740 772 734 777 0.80
12 26 0.0084 1e+02 3.5 0.0 23 54 790 822 784 828 0.80
13 26 0.0012 15 6.2 0.0 23 63 840 881 834 883 0.81
14 26 0.0083 1e+02 3.5 0.0 23 54 878 910 872 916 0.80
15 26 0.0012 15 6.2 0.0 23 63 928 969 922 971 0.81
16 26 0.0083 1e+02 3.5 0.0 23 54 966 998 960 1004 0.80
17 26 0.0084 1e+02 3.5 0.0 23 54 1016 1048 1010 1054 0.80
18 26 0.0012 15 6.2 0.0 23 63 1066 1107 1060 1109 0.81
19 26 0.0083 1e+02 3.5 0.0 23 54 1104 1136 1098 1142 0.80
20 26 0.0084 1e+02 3.5 0.0 23 54 1154 1186 1148 1192 0.80
21 26 0.0012 15 6.2 0.0 23 63 1204 1245 1198 1247 0.81
22 26 0.001 12 6.5 0.0 22 63 1241 1283 1235 1285 0.80
23 26 0.0069 83 3.8 0.0 22 54 1279 1312 1273 1318 0.80
24 26 0.0084 1e+02 3.5 0.0 23 54 1330 1362 1324 1368 0.80
25 26 0.0011 14 6.3 0.0 23 63 1380 1421 1374 1424 0.81
26 26 2.6e-08 0.00032 21.1 0.0 23 71 1418 1467 1413 1470 0.88

Sequence Information

Coding Sequence
ATGTGGACAACAAAGACTTTTCTAACCAAAACAAAGCGcggtaatattataaaaattgtCAGGGAACATTACTTGCGTGATGACTTATTATGTGGTTCTTCAGCTTGCAATGTCTGTCCCCACAAGGATGATGAACTCGTACTGGAATCTCTGCCAGAATCCATCTGCGCATTGTTTGATTACCCTCACTATTTGATACTGGACACAAATGTTGTTCTACACCAAATTGATGTTCTTGAAGAAGATGCATTGAAGAATGTTATAATCCTGCAAACTGTGTTGGAGGAAGTTAAACATCAGAACACAGCCACATTTCAAAGATTGTTAGAAATAATAGGAAATAAGGATAGGaaattttattcatttgtcAATGAACATCATAAagATACTTACATTGAACGTAAACCTGGTGAGAAACAGAATGATAGAAATGACAGGGCTATTCGTAAAGCAGCAGTGTGGTACGAATCACACTTGAGTATAAACAGTGTTGTTGGACAGTCTCCGAGGATTATTTTACTGACTGATGATGAAAATAACAGAAAGATTGCTCAAGATGAAGGCATTGTGTGCTGTAATGtgaAAGATTACATAGAGAATGTGACAGGGTTTGTTGGCCTTAGTGATAAGTTATCAAAGAATGTGATACCAGAAAGTTGTTCGAAGGACGCTCTCTACCCAGCGCACTTAACTCCTACTCAAGTACATGAAGGGATAAGGAATGGCAAGTTATATCAGGGTTCGTTTCACGCTTCACGTGATAACTTCTTGGAGGGTACTGCTACTATTAATGGATTTGATAAGCCTATTCTCCTGCAAGGTCACATAGGAATCAACAGGGCTGTCGATGGTGATGTTGTTGCTGTCGAACTTCTGCCTGAAGAGGAATGGCGGAGGCCCAGCGATATTGTTCTCGAAGACAAGGCTGACGACCCTGGAGATTATCTAGAAGAGGAAGCACTGCTGCTCAATTCTGTGAAAGCTGAAAAACATAATGATGATATAACACCCACCGGGAAAGTGGTTGGCATTATAAGGAGAAAATGGAGACAATATTGTGGTATTTTGATGCCGAGCAAGTTTCCTGGCGCCACTCGTCACCTGTTCACGCCGGCGGAGAAGCGCATCCCGCGCGTGCGCATCGAGACACGCCAGAGCGACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTTCACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGCGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGCGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGCGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTTCACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGCGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTTCACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTTCACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTACACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTTCACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTACCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGCGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTTCACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGCGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTTCACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTTCACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGCGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTTCACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTTCACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGCGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGCGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTTCACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTACGTGCACATCTACCTTCACAACTAGCGGACTCACGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGCGGACTCACGGACTCACGCGCTCGCTGCACAGCGCATCCTCGTGGCGCTCGACTCGTGGCCGAGGAACAGTCGCTATCCGCTCGGACACTTCGTGCGCGCGCTCGGACCTATAGGTGATAAGAACGCTGAGAACGAAGTAATTCTGTTGGAACATGACGTGCCTCACGCACGGTTCAGTGAAGCTGTACTATCTTGTCTACCGCCTGACGACTGGACGATACCTGAACAGGAAATTAAAAAACGAATGGATCTCCGATCGATATGTATTTGCTCAGTGGATCCTCCTGGCTGCACGGATATAGACGATGCACTCCACGCACGTCCTCTTAATGACTCAACACATGACGGACTCAAAAAATACGAGGTTGGAGTGCATATCGCTGACGTCACATATTTTGTACGACCTGACACTGCTCTCGATAAGGAGGCTGCGTCTAGATCCACTACGGTGTATCTGGTGGACCGAAGAATCGACATGGTGCCAGATCTATTGAGTTCAAACTTGTGCTCATTGCGCGGTGGTGAAGAGAGGTTGGCCTTCTCGTGCGTGTGGGAAATCGACGAGAATGCCAATATATTGGCCACTAGGTTCCACAAGAGCGTTATAAAGTCAGCGGCGGCGATGACATACGAAGAGGCACAGATAGCGATCGATGATTCATCCCGTGATGACGAGGTCGCCTCCTCTTTGCGGACACTCAACGCGCTCGCAAAAAAACTTAAACGCAAGAGATTAGACCAAGGAGCGTTGCTGCTAGCCTCGCCGGAGATAAGGTTCcagGTGGATTCCGAAACGCACGACCCTATAGAAGTGCAAGCGAAGAAACTAGTCGACACCAACTCGATGGTGGAAGAGTTCATGTTGCTGGCGAACATCAGCGTGGCGCAGAAGTTGTTGGAGGACTTCCCGCAGTGTGCGCTGCTGCGGAGACATCCCTCACCGCCTCCTGCTAACTTCGACACCTTCCTCAAGGCGGCTAGGCAGCAGGGCTTCGAGTTGGACGTGTCGACGAACAAAGCATTCTCCAAATCTCTCGACGAGGCCGTCATACCGGGTCGGCCGTACTTCAATACATTGCTGCGTATAATGGCGACGCGTTGTATGCAACAAGCGGTGTACTTTGTCAGCGGATCTGTATCACAGGAGGAATACTATCACTACGGGCTAGCGTGTCCTATATATACGCATTTCACATCGCCTATACGAAGGTACGCGGACGTGATGGTGCACCGGCTGCTGGCGGCGTCGCTGGGCTGCGACTGGACGCACGCGGCGCTGACGGACGCGCGCCGCGGCGCCGCGCACTGCGACACGCTCAACTACCGGCACCGGCAGGCGCAGCACGCAGGACGAGCCAGTGTCGCGCTCAACACGCACATATTATTCCGAAACAAAGTGACGATCGAGAACGCCGTAGTGCTGACTGTGAAACGGAACGCCCTGCAGGTGTTGATACCCAAGTACGGGCTCGAAGGACCCTTGTACCTGCCCTCCGACAAGTTCAAGTACAACGAGGAGGAACATTGCCAAGTATGCGACCATGTTACTCTGAAGACATTTGACGAGATCACTGTTCGCCTCAGCCTCGATAGATCCAATCTGCAGCATCAGAAACTTGTCTTCCAACTGGTTAAGCCCCACGTGCCAGGGTTTAGCTACGTACCGGAGGATCAAGATAAAATGGACGTTGACCCTTCAAATGTCAATGTAGAAAAAGCGAAAGGGACAGAAGATGGGAAGAAAAGGAAAGATACTACTGACAGTAAAGTCAGCAAAAAAAGGAaggctaaaaaataa
Protein Sequence
MWTTKTFLTKTKRGNIIKIVREHYLRDDLLCGSSACNVCPHKDDELVLESLPESICALFDYPHYLILDTNVVLHQIDVLEEDALKNVIILQTVLEEVKHQNTATFQRLLEIIGNKDRKFYSFVNEHHKDTYIERKPGEKQNDRNDRAIRKAAVWYESHLSINSVVGQSPRIILLTDDENNRKIAQDEGIVCCNVKDYIENVTGFVGLSDKLSKNVIPESCSKDALYPAHLTPTQVHEGIRNGKLYQGSFHASRDNFLEGTATINGFDKPILLQGHIGINRAVDGDVVAVELLPEEEWRRPSDIVLEDKADDPGDYLEEEALLLNSVKAEKHNDDITPTGKVVGIIRRKWRQYCGILMPSKFPGATRHLFTPAEKRIPRVRIETRQSDALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTFTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIADSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIADSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIADSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTFTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIADSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTFTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTFTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTYTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTFTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIADSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTFTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIADSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTFTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTFTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIADSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTFTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTFTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIADSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIADSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTFTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGTCTSTFTTSGLTDSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIADSRTHALAAQRILVALDSWPRNSRYPLGHFVRALGPIGDKNAENEVILLEHDVPHARFSEAVLSCLPPDDWTIPEQEIKKRMDLRSICICSVDPPGCTDIDDALHARPLNDSTHDGLKKYEVGVHIADVTYFVRPDTALDKEAASRSTTVYLVDRRIDMVPDLLSSNLCSLRGGEERLAFSCVWEIDENANILATRFHKSVIKSAAAMTYEEAQIAIDDSSRDDEVASSLRTLNALAKKLKRKRLDQGALLLASPEIRFQVDSETHDPIEVQAKKLVDTNSMVEEFMLLANISVAQKLLEDFPQCALLRRHPSPPPANFDTFLKAARQQGFELDVSTNKAFSKSLDEAVIPGRPYFNTLLRIMATRCMQQAVYFVSGSVSQEEYYHYGLACPIYTHFTSPIRRYADVMVHRLLAASLGCDWTHAALTDARRGAAHCDTLNYRHRQAQHAGRASVALNTHILFRNKVTIENAVVLTVKRNALQVLIPKYGLEGPLYLPSDKFKYNEEEHCQVCDHVTLKTFDEITVRLSLDRSNLQHQKLVFQLVKPHVPGFSYVPEDQDKMDVDPSNVNVEKAKGTEDGKKRKDTTDSKVSKKRKAKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-