Amin020850.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amiota minor
Gene Symbol
RREB1
Assembly
GCA_037043295.1
Location
JBAMAW010002199.1:26421-35865[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.00029 0.029 15.4 0.1 1 23 312 334 312 334 0.98
2 12 0.00013 0.013 16.6 0.2 1 23 344 366 344 366 0.98
3 12 3.4e-05 0.0034 18.4 7.5 1 23 372 394 372 394 0.98
4 12 2.5 2.6e+02 3.0 3.8 2 19 808 825 807 825 0.96
5 12 0.013 1.3 10.3 0.1 1 23 1064 1086 1064 1086 0.97
6 12 2.8e-05 0.0028 18.6 1.2 1 23 1096 1118 1096 1118 0.99
7 12 0.0012 0.12 13.5 2.0 1 23 1124 1147 1124 1147 0.97
8 12 0.0043 0.43 11.8 2.0 1 23 1554 1577 1554 1577 0.95
9 12 0.00012 0.013 16.6 0.3 2 23 2016 2037 2015 2037 0.97
10 12 0.21 21 6.4 6.3 1 23 2043 2066 2043 2066 0.96
11 12 0.012 1.2 10.3 0.5 3 23 2296 2316 2294 2316 0.96
12 12 0.0019 0.19 12.8 4.8 1 23 2322 2344 2322 2344 0.99

Sequence Information

Coding Sequence
ATGCTTGCAACGCCACAAcatgcaaaaacaacaacaacagcaaaaacaacaccagcaacaacaacaacaacaacaacaacagaatcagAACtccaaaaaatcaaaatggaaaGACGTGATTCCTCAACATCGGAGTCCTCAGTGGAACAACTCGATATGGGACGCACACCAAAGAAGTTAAGCGCTCATAGTGCGGCAACTTCAACGCCTCACAGCAagaccaacaacagcaacacaaacaaaattgtaacaacaacaactactaccAATGGGGGCCCTGACATTCTAACAACAACGCGCAAACGTAAATTGCGGTGCACAAGAGACTctgaacatgatgatgatgataatattgatGGTGATATtaatcatgatcatgatcatgataacGATCACGATgataatgttaatgatgatggtgttgaaGAAGAAATGGAGGAAAATCTGGTCAAAATTAAATCTGAAGATGAAGATCataagaatgatgatgatgatgatgatgctgctgctgatgctgatggtgatggtgataataatgatgattcaACAGCAGTgaaaaaacatcatcaacgCACACATAAACGCCGTCGCGCCAGTAGTAATCCCCATCGTTTAGATAAACGTAGTGGCGCTAATCCTATAGTTCAACTGATAACCGATTCGGAATCAGGGAATTCACTTCGTAAGAAATTTCGTTTCAATCGAAGCAATTTggatcaacaacagcagcaacaactaagcAATAATGAATCGGGTTTTGTTGATGCTAGTGGCAATGGTAGTCAATATTCATTGAATGCCAATGTTAGTGTTGCATCATCATCGGGTGACTCATCACCGCATGGTGTCTCTAGTCCAGAATCAATGAGTGGTgctgatcatcatcatcaacatcatcatcttcaccaTCAGCCTCATAATGAacatatgaaatttgtatgcCCAATTTGTGAGGTTGTCTCAGCAACACCACATGAATTTACAAATCATATAAGATCCCATAATTATTCCTCAGGTGATACTGAGAATTTCACATGCAAAATATGCTCAAAGGTGCTTTCATCGGCCTCATCATTGGATCGTCATGTGCTCGTGCACACTGGTGAACGTCCATTTAACTGTAAATATTGTCATCTAACCTTTACTACAAATGGTAATATGCATCGTCATATGCGCACACACAAACAGCATCaacagaatcatcatcatcgtcgcaACTCGAATGGAACAAAGAATAatggaggtggtggtggttcagcagcaacacaaacatcaacaacttcagcagcagcagcagcaacaccaaATGCTTTAACCTCAACTATTGCGAGTAGCAGCAGAGGAGGAGGTGAAGGTGGAGGTGGGGGTAATGAAGGTGTTAATAAGCAGCAAACATTAATGGTtaatggtgttggtgttggtgttggtgttggtgttggtggctTAGTAAGTGGTATTGGTATTAGTAGTACTGGTGGTAATGGTGGAAAGCGTCGTTTAAATGGTAGTGGAAGTGGTAGTGTTGGCAACATAGAAAGTTACGAAAGTGATGATGGCAGTTGCTCAATGGATTCAACAAGTGCCAACAGTCAAAGCTCATCCagcaataataagaacaacaacaacaacaacaacaacgacaacaaccttaataataataatagtaatcatcatcatcatcatcataataacaataataacaacaacaacaataacaataacaatttaaaagccaacaacaatttgaaacGAAAAAAGCATGATTCGGGCGATCTTCAATTAAATGTTGGTGATgacaacaataccaacaatacCAAAGTGACAACGACGACAtcagaaattgaaaatgttaatgaatctgctgctactgctactgttactggtgatgatgataatgatgatgctacTACACTTGCTTCTCCGGGTGATAATGATAAGCTCGTGCTTATGACAACAGGAGGAATTGCAAAGCATCGGCGCGTGAAGACCacaattaataacaatataattgaagctgaagctgaagAAGAAGCATCCATCAATGACAACCatgataatcatgatgatgattgtggtaatgttagtgatgatgatcatcaagATCATGAAGTTGGTGATGAAGTCAACGAAATTGATGCCAATATCATAAAAAGAGATGAttatggtggtggtggtggtggtggtgataatgataatgatgatagtgatgaGCCTGACGCTGATATTATAACAAGCACACCAGAtgttgctactgttgctgttggtgcaGAACCCGAAGAACCCACAACAATTAGAAAAGTTAACTCAGCTGAATATCAACTTGATCCGACATTATCTTGTCCCGTTTGTAAACTAgttgatttcatttgcttGCGTGATTTGGGCATACACATGGATCATTCTCATCCCAATATACCAACGAAGTGTCGTCGTTGCAAGGTTGTATTTCGGACACATCGTCAACTTCATACCCATCCATGTactaaaaaactaaagaatacATTGAAGGCTCTAGAAAAACTTAAGAAACTTGAGCAAAGAAGTTCCTCGCCGATTAACCCGGTAACTTCGGCCAATCAATTAAGCTTCTCAGCAAACTTTcttaataatgatgaagattCTACTGATTTTGAAAGTGTTGAGGGCaacagtgatgatgatgatgatgatgatgaggatgaagCTGATAATGGTGGTGTTCACTATCAAAATGATCAGCAAATAGAAACATctcaaaataatcaaaagaatGTTCCtcaacataatgatgatgataaagaaggCAATGCTGATGACGTTAATgtcaataatgataatgaagcTGATGATCATCCAATAGTTTCAACCGATTTACAACGTCGTGAAGAACTATTACGTCAATTGTatttaaagaataataaaactgcTGTCAGCATGTTATCGCCCCTTTATAATGATGAACCATCCGATAATACATCATCATTGCTCAAATACGAAGTTGCCGATACAAAGCAATCACAAGATTCTAAAGATTTGGCTGATATACAATCAATACTCAATATGACATCATCTTCGTCTACATCAAATTTCTTAAAGAATTTCGAGCAATCGGTAAATACACCATCCAGTAATTATAGTTGCgataaagatgaagaagagGCTCAAGATGCTTTCACATCAGAATttcgaaaaatgaaattacgtGGCGAGTTTCCGTGTAAACTTTGTACGGCAGTATTTCCCAATTTGCGTGCACTCAAAGGACACAATCGTATACATTTAAGTGCCGTTGGACCAGCTGGTCCATTCCGTTGTAATATGTGTCCTTATTCGATATGTGACAAAGCAGCTCTTGTACGTCACATGCGTACCCATAATGGGGATCGCCCCTATGAATGTGCCGTATGTAATTATGCTTTTACCACAAAAGCGAATTGTGAACGTCATTTACGTAATCGTCATGCAAAGACGACAAGAGATGAAGTAAAACGCGCAATTATCTATCATCCATCGGAAGATTCCTCTTGTGATGATCCTGTCAagaaattacatttatttaatggTTCATCTGATTTcgatgatgatattgaaatGACAAGTGCTGCAGCTGCTATTGGTAGTGGTGGAAATAGTACTAGTGCTGGTGCTTTTCAATCACTTTACCATCAACCCAAGGATCGTTCGACTCCAGTTTCACATTTAAAGGAAATGTTATTGgcagatcatcatcatcatacacatCATGGTCATGCTCAAGCTGCAAACAACAAACCACTTAAGATTCAAGTTAAGAGTCTCGAACAATTGCTCGATAAATCGAATTCATCAATCTACAATGAGCcaccacaaacaacaacaaataatttaaatcaagCTGCAGTCCCCACTGATCACCCATCACCCATTGACTTAAGTATGGATGCACTGGATTTAAGCAAAAAACCAAATGGTGAAAAGTCCAGCGGATTATCACAGTTAACCAATGAACCAGAATTGAATTCGCTTGGTGGTGCTAGTGGCAttggtgctgctgctgagCCCAAATTTGATTTTGCCATGCTCGAGAAGAATCAACAATTTTTGCTAGCTCAACAACAGCTCTTGAACGAAGCTTTTCCAAAGGCACTCGTTGATCCAGCTCAATATTTCCAGCAATTGTATCGCAACCTTGTCTTTCAACCATTGAATCCCTTCTTCttgcaaaactcttttatGCCAAATCAGATCAAtgatttgcaaaaatttgCACCGCTCATGAGTCGCATGTTTGGTAATGCAGCCGCCAGTAATGGCAGTGCAGCCTCGGGAGGCGCAACCAGTTCATCTATCAATGTAAATGAGGCCATCAATAAACACAATGCCACCAATTCACCAACTACAATGTTGCCACAAATAAGTCCATTAATGTCAAGTGATAAATCGAGTGCACAATCTTCACCGAATTCGATTGCAGTTCAGCTATTACCCAAGTCGATGCGATCATCGCCTTCAGCAGCTCCATCAACAGCAAATAGTGGTGGCGCTTCATTGACTATACCACGCCATTcccatcatcagcatcatccacatcatcataatattcCGCCGACTGTACTATCAGGTGGACCAGTTAAAATGGTCATCAAGAATGGTGTACTCATGCCCAAGCAGAAACAACGTCGCTATCGCACTGAGCGTCCATTTGCCTGTGAACATTGCTCCGCTAGATTTACCTTACGCTCAAATATGGAGCGCCATGTCAAGCAACAACATCCCCAGTACTATGCCCAACGTCAACGTAGCGGTCATCATGTAATGCGTGGCCGTGGGGCCTCCAGTaatgctgctgccgctgccaTGAATAGTTTCAATCATTTGCAGGCTTTTGCTCAAGCCCAAAATAGTGCTCATCATGGACATCTCGCGTCAAACAAAAGTGGCATAGGCGCCGCCACCGCGTCACCCATCTCAGAGCAAGTGAAATATGCAATTTTAGCTCAACAACTTAAAGCACGTAAAGATACTGATTTGCTTCAACAAGCCTTGGCTCATGGTTCCAGTAGTATTACAGCGAATCATCTATTGCTTGGTAGTGGAGTTGGTGGTGGTGCTTCTGCCGCTACAACTGTTGGTGGCAACATGCCCAATAATATCGTTCAAGGACAGTTTAGCTTTGTCGCTCACATGAATCATAGCAATCAGAGTAGTAACAATGACACAAATGGCAATGGTGCCATGGAAGATGATGAACCCAAATTGATaattgatgaagatgatggcCATGACgacgaagatgatgatgacgatggtgatCATGATGACAATAACGATCATCATGATGGCAATGCTGATGATAACAACGTTGATGACGTTGAACAAATAGGTGATGATATTGAGGTCATAccggatgatgatgatgatgctgatattaagcatgatgatgctgttgctaataaaaatgaaactaatcATCATAAAGATGATGAAATTAAAACTGCTTATGCTTTAGTTGCTCCTACTTCTTTGCCTATTAAACCAATGGAAGTTAAGCCTTCAACTTATAAATCTAAAGAGAAGCATGAATCTGCCAAGAGAATGGCTGAAACCATTCTTGAGCAAGCTATGAAAGCTGGTCTATCGATGACACCAACATCATCGAAATCAACTCCAACGCCAGCAAAACAAGTGGTCAAATCGAACGAAGAACTAAAAACACCAATACCGACACCAACGTCAATATCTCACGCCAGTGGCGGTACAAAGGCTCAAGCCATGAAATCAATGATTGCTCAAGCCGGTTCAGTCGGTAAATTCCTTAAAGAGGTTGCCAGTTCACCATTCAAAGATGAGTCTCAAGATCTTGTGCCCGTCTCAAAGCTCGTTGACAATGCCACCAGCAATCAAATGTCCTCATTCAATACATACTTTCGTCCTAGCGATGTGGCTAATCATATGGAACAGAGCGACGAAGAGGGTCTAGTTGCCTCTGGCAGTGCCAGTGAAAGCAATAACTCAGGCACAGAGGATGTTACCGCACCGGTTGAACCGAAAAAGAAGTCAGCATATAGTTTGGCACCGAATCGTGTCTCCTGTCCTTATTGCCAGCGTATGTTTCCTTGGTCGAGCTCCTTACGTCGTCATATATTGACGCACACAGGTCAGAAGCCATTCAAATGTTCACATTGCCCACTCCTCTTTACCACAAAGAGTAATTGTGATCGTCATTTGCTACGTAAGCATGGCAATGTTGAGTCAGCCATGTCGGTCTATGTGCCTACTGAAGATGTCACTGAACCCATACCAGTGCCGAAATCCGTTGAAGAAAtcgaacaacagcaacgacaacGCGAAGAAGAAGAACGCCGCCGCAAAGCTGAAGAGGCACAATTGGAACGCGAACGCCGCGAACAGGAGAGACGCAAACAACGAGAACATGAACAACAGGAGCAACTACTGAAACAAATTGCTGCTGTACAATTCAATCAATTAAGTGCAGCAGCCGCTGTTGCTGCAGCAGCTgtcaatgctgctgctgttcccAATTCTGGTAACAAAGTTGGTCCAGCAGCTAATGAAACTACTGGTGCCAACTCATCATCGTCACCTGGTGCTGGTGCTACTGCTGGGTCTACTTCTGAGGCGGCCGCTTCAAGTGATTTGCCTTACAAGTGTCATCTATGTGAAAGTTCCTTTGGCGAACGCATACAATGCCTGGAACACATTAAGAATCAACATGCCCAGgattttgctttattgttaGCCAAAGGTGCTATTGAAACTGATGTTGAGCCCCAACCCCTACATGCTGCTCCTACTACTGCAGCAACCGATGAAGATGAACGCGAGCGTGAACGTGACACAAATGCAGGCAagtcctcatcatcatcatcaggtaAATATCCTGATTATAGCAATCGCAAAGTGATTTGTGCATTTTGTGTGCGTCGCTTCTGGTCCACCGAGGACTTACGTCGTCACATGCGTACACATTCGGGGGAACGCCCATTTCAATGTGAGATTTGCTTACGCAAATTCACATTAAAGCACAGCATGCTGCGTCATATGAAGAAGCACAATGGGCGTCAATATAATGGTGTCAATGGTTTAAATTGTGGCACTGGAGGAgttagtggtggtggtggtagcgGTGGTGCTTTAATTGGTGATCATGGTGCTGCTGGTAATTCTGGTTCAGATTTCTCTGATGATGAACAAATGGCAGCTACACCACCTCCACCTTCATTAATGCcaccttcatcatcatccacatcatcatcatcatcctcctcctccttctcAACAATGGTCAGTGGTAAGTCAACAGTTACAAATTCCAATGTCAATGCAGTGGCAGTCATGTCAAATGCTTTGGGTGCCATGCATGCACCAAAAATACAAGAACTTCTCAGCAAGGCCAGTGAGTGGCGTTCAAGTCGTTTGGGTGagcataaagaaaatatagcaTCTACTCTACCCgataatgaacaacaacaccatcataatcatcaatatggtaacaataacaacaataacaatagtaataacaacaacaataatgcaCAACAAAGTGGAGATCTCATTGGAAATTTGCTTGGGATCAGCGATCAAggtatattaaataaattgctttCATCGGCCGACGAGGCAGCCAAATTTTTGGgtgttgaaaaataa
Protein Sequence
MLATPQHAKTTTTAKTTPATTTTTTTTESELQKIKMERRDSSTSESSVEQLDMGRTPKKLSAHSAATSTPHSKTNNSNTNKIVTTTTTTNGGPDILTTTRKRKLRCTRDSEHDDDDNIDGDINHDHDHDNDHDDNVNDDGVEEEMEENLVKIKSEDEDHKNDDDDDDAAADADGDGDNNDDSTAVKKHHQRTHKRRRASSNPHRLDKRSGANPIVQLITDSESGNSLRKKFRFNRSNLDQQQQQQLSNNESGFVDASGNGSQYSLNANVSVASSSGDSSPHGVSSPESMSGADHHHQHHHLHHQPHNEHMKFVCPICEVVSATPHEFTNHIRSHNYSSGDTENFTCKICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQQNHHHRRNSNGTKNNGGGGGSAATQTSTTSAAAAATPNALTSTIASSSRGGGEGGGGGNEGVNKQQTLMVNGVGVGVGVGVGGLVSGIGISSTGGNGGKRRLNGSGSGSVGNIESYESDDGSCSMDSTSANSQSSSSNNKNNNNNNNNDNNLNNNNSNHHHHHHNNNNNNNNNNNNNLKANNNLKRKKHDSGDLQLNVGDDNNTNNTKVTTTTSEIENVNESAATATVTGDDDNDDATTLASPGDNDKLVLMTTGGIAKHRRVKTTINNNIIEAEAEEEASINDNHDNHDDDCGNVSDDDHQDHEVGDEVNEIDANIIKRDDYGGGGGGGDNDNDDSDEPDADIITSTPDVATVAVGAEPEEPTTIRKVNSAEYQLDPTLSCPVCKLVDFICLRDLGIHMDHSHPNIPTKCRRCKVVFRTHRQLHTHPCTKKLKNTLKALEKLKKLEQRSSSPINPVTSANQLSFSANFLNNDEDSTDFESVEGNSDDDDDDDEDEADNGGVHYQNDQQIETSQNNQKNVPQHNDDDKEGNADDVNVNNDNEADDHPIVSTDLQRREELLRQLYLKNNKTAVSMLSPLYNDEPSDNTSSLLKYEVADTKQSQDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSCDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDPVKKLHLFNGSSDFDDDIEMTSAAAAIGSGGNSTSAGAFQSLYHQPKDRSTPVSHLKEMLLADHHHHTHHGHAQAANNKPLKIQVKSLEQLLDKSNSSIYNEPPQTTTNNLNQAAVPTDHPSPIDLSMDALDLSKKPNGEKSSGLSQLTNEPELNSLGGASGIGAAAEPKFDFAMLEKNQQFLLAQQQLLNEAFPKALVDPAQYFQQLYRNLVFQPLNPFFLQNSFMPNQINDLQKFAPLMSRMFGNAAASNGSAASGGATSSSINVNEAINKHNATNSPTTMLPQISPLMSSDKSSAQSSPNSIAVQLLPKSMRSSPSAAPSTANSGGASLTIPRHSHHQHHPHHHNIPPTVLSGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRQRSGHHVMRGRGASSNAAAAAMNSFNHLQAFAQAQNSAHHGHLASNKSGIGAATASPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSITANHLLLGSGVGGGASAATTVGGNMPNNIVQGQFSFVAHMNHSNQSSNNDTNGNGAMEDDEPKLIIDEDDGHDDEDDDDDGDHDDNNDHHDGNADDNNVDDVEQIGDDIEVIPDDDDDADIKHDDAVANKNETNHHKDDEIKTAYALVAPTSLPIKPMEVKPSTYKSKEKHESAKRMAETILEQAMKAGLSMTPTSSKSTPTPAKQVVKSNEELKTPIPTPTSISHASGGTKAQAMKSMIAQAGSVGKFLKEVASSPFKDESQDLVPVSKLVDNATSNQMSSFNTYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTAPVEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVTEPIPVPKSVEEIEQQQRQREEEERRRKAEEAQLERERREQERRKQREHEQQEQLLKQIAAVQFNQLSAAAAVAAAAVNAAAVPNSGNKVGPAANETTGANSSSSPGAGATAGSTSEAAASSDLPYKCHLCESSFGERIQCLEHIKNQHAQDFALLLAKGAIETDVEPQPLHAAPTTAATDEDERERERDTNAGKSSSSSSGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGRQYNGVNGLNCGTGGVSGGGGSGGALIGDHGAAGNSGSDFSDDEQMAATPPPPSLMPPSSSSTSSSSSSSSFSTMVSGKSTVTNSNVNAVAVMSNALGAMHAPKIQELLSKASEWRSSRLGEHKENIASTLPDNEQQHHHNHQYGNNNNNNNSNNNNNNAQQSGDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00061383; iTF_00062215;
90% Identity
-
80% Identity
-