Acom029596.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amiota communis
Gene Symbol
Rreb1
Assembly
GCA_037043315.1
Location
JBAMAV010001746.1:533374-541834[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.00028 0.034 15.5 0.1 1 23 315 337 315 337 0.98
2 12 0.00012 0.015 16.6 0.2 1 23 347 369 347 369 0.98
3 12 3.3e-05 0.0039 18.4 7.5 1 23 375 397 375 397 0.98
4 12 2.5 2.9e+02 3.1 3.8 2 19 794 811 793 811 0.96
5 12 0.013 1.5 10.3 0.1 1 23 1051 1073 1051 1073 0.97
6 12 2.7e-05 0.0032 18.7 1.2 1 23 1083 1105 1083 1105 0.99
7 12 0.0012 0.14 13.5 2.0 1 23 1111 1134 1111 1134 0.97
8 12 0.0042 0.5 11.8 2.0 1 23 1539 1562 1539 1562 0.95
9 12 0.00012 0.014 16.6 0.3 2 23 2008 2029 2007 2029 0.97
10 12 0.2 24 6.5 6.3 1 23 2035 2058 2035 2058 0.96
11 12 0.012 1.4 10.4 0.5 3 23 2285 2305 2283 2305 0.96
12 12 0.0019 0.22 12.9 4.8 1 23 2311 2333 2311 2333 0.99

Sequence Information

Coding Sequence
ATGCTTGCAACGCAACAACAtgcaaagacaacaacaacaacaacagcaaaaacaacaccagcagcaacaacaacagaatcagaaatccaaaaaatcaaaatggaaAGACGTGATTCAACAACATCAGAGTCCTCAGTGGAACAACTCGATTTGGGACGCACACCAAAAAAGTTAAGTGCTCATAGTGCAACCACTTCAACGCCTCACAGcaagaagaacaacagcaatacaaataaaattgcaacaacaacaacaagtactAGCAATGGGGGCCTTGACATtctaacaacagcaacaacgcgCAAACGTAAATTGCGTTGCACAAAGGACTctgaagaagatgatgatgatgatgatgataatattattGATGGTGATCATGATCAcgatcatgatgataatgatgatgatgatgatggtgttgaaGAAGAAATGGTGGAAAATCTggtcaaaattaaaactgaaaatgaagatcataataatgttgatgatgatgatgatgatgctgctgctgatgctgatggtgataATAATGATCATTCAACAGCAGTTAAGAAACATCAACGCACACACAAACGCCGTCGCGCCAGTAGTAATCCGCATCGTTTAGATAAACGTAGTGGCGGCATCAATGCCATAGTTCAATTGATAACCGATTCGGAATCAGGGAATTCACTTCGTAAGAAATTTCGTTTTAATCGAAGCAATTtggatcaacaacaacaacaacagcaacaacaacaactaagcAATAATGAATCTGGTTTTGTTGATGCTAGTGGCAATGGTAGTCAATATTCATTGAATGCCAATGTTAGTGTTGCATCATCATCGGGTGGCTCATCACCGCATGGTGTCTCTAGTCCAGAATCATTGAGTGGTGctgaacatcatcatcaacatcatcatcttcaccaTCAGCCTCATAATGAACatatgaaatttgtatgcCCAATTTGTGAGGTTGTCTCAGCAACACCACATGAATTCACAAATCATATAAGATCCCATAATTATTCCTCAGGTGATACTGAGAATTTCACATGCAAAATATGCTCAAAGGTGCTTTCATCGGCCTCATCATTGGATCGTCATGTGCTCGTGCACACTGGTGAACGTCCATTTAACTGTAAATATTGTCATCTAACCTTTACCACAAATGGTAATATGCATCGTCATATGCGCACACACAAACAGCATCAACAGAATCATCAGCGTCGTAACTCGAATGGAACAAAGAATAATGGAGGTGGTGGATCAGCAGCAAcacaaacatcaacaacatcagcagcagcagcaacagcaacaccaaatGCTTTAACCTCAACTTCTGCGAGTAGCAgtagaggaggaggaggaggaggtggTGGAGGTAATGAAGGTGTTAATAAACAGCAAACAGCAATGGTTAATGGCTTAGTAGGTGGTATTGGTATTAGTAGTGCTGCTGGTAATGGTGGAAAGCGTCGTTTAAATGGTAGCAGTGGCGGCAGTGGGAGTGTTGGCAACATAGAAAGTTACGAAAGTGATGATGGCAGTTGCTCAATGGATTCAACAAGTGCCAACAGTCAAAGCTCatctaacaataataataacaacaacaacaacaacaacgacaacaaccttaataataataatagtaatcatcatcatcatcataataataacaacaacaacaacaacaatttaaaagccaacaacaatttgaaacGAAAAAAGCGTGATTCGCGCGATCTTCaattaaatgttgttgttgatgacaacaatactactagtactactaaCAATACCAAAGCGGCAACGACAACAGAAGttgttaatgataatgaatctgctgctactgctattggtggtgatgatgatgataatgatgatgatgctactACACTTGCTACTCCGGGTGATAATGATAAGCTCGTGCTTATGACAACAGGAGGAACTACAAAGCATCGACGCGTGAAGACcacaattaataataatataattgaaaCTGAAGCTGAAGAAGAAGCCAACATCAATAACAACCATGAtaaccatgatgatgatgattgtgatgttaatgatgatcatgatgatgatgatgataatgtagatgttgatgatgtcgataatcatgatggtgatgatgaaatcaatgaaattaatgCCAATATCATGGATCAGgatggtgatgatgctgatATTATAACAAGTACACCAGatgttgctactgttgctgttggtgcaGAACCCGAAGAATCCACAACAATTAGAAAAGTTAACTCAGCTGAATATCAACTTGATCCAACATTATCTTGTCCTGTTTGCAAATTAGTTGATTTCGTTTGCTTACGTGATTTGGGCATACACATGGATCATTCTCATCCAAATATACCAACGAAATGTCGTCGTTGCAAGGTTGTATTTCGGACACATCGTCAACTTCATACCCATCCATGTACTAAGAAGCTAAAGAATACATTGAAGGCTCTGGAAAAACTTAAGAAACTTGAGAAAAGAAGTTCCTCACCGATTAACCCGAGAACTTCGGCTAATCAACTTAACTTTTCATCTGattttcatgatgatgatgatgatgatgataatgaagcgGACTCTACTGATTTCGAAAGTGCTGATGGCAacagtgatgatgataacaatgatgctgctgctgatcaTCAAATAGAAGTATCTCATCGTAATCAACAGAATGTTTCCcaacataatgatgatgatgataatgatgatgatgatgatgatatagaaggtaatgctgatgatggtaatggcgataatgatgctgatgatcaTCAAATAGTTTCAAGCGATTTACAACGTCGTGAAGAACTATTACGTCAATTGtatttaaagaataataaaactgCTGTTCGCATGTTGTCACCAATCTATAATGATGAACCATCTGATAATACATCATCATTGCTCAAATACGAAGTTGCCGATACAAAGCAATCACATGATTCTAAAGATTTGGCTGATATACAATCAATACTCAATatgacatcatcatcgtccacatcgaattttttaaagaatttcgAGCAATCGGTAAATACACCATCCAGTAATTATAGCTGCGATAAGGACGAAGAAGAGGCTCAAGATGCTTTCACATCAGAGTTTCGTAAAATGAAATTACGTGGTGAGTTCCCGTGTAAACTCTGTACGGCAGTATTTCCCAATTTGCGTGCACTCAAGGGACATAATCGTATACATTTAAGTGCTGTTGGTCCAGCTGGTCCATTCCGTTGTAATATGTGTCCTTATTCGATATGTGACAAGGCAGCTTTGGTACGCCATATGCGTACCCATAATGGTGATCGTCCCTATGAATGTGCCGTATGTAATTATGCTTTCACCACGAAAGCTAATTGTGAACGTCATTTACGTAATCGTCATGCAAAAACGACAAGAGATGAAGTGAAACGCGCAATTATCTATCATCCATCAGAAGATTCCTCATGTGATGATCCTGTCAagaaattacatttatttaatggttcatctgattttgatgatgatgaaatgacAAATGCTACTGCAGTTGCTATTGGTACTGGTGCTTTTCAATCACTTTACCATCAACCCAAAGATCGTTCGACTCCAGTTTCACATTTAAAGGAAATGCTATTGgcagatcatcatcatagtcaccatggtcatagtcatagtcatgCTCAGGCTGTCAATAATAAACCACTTAAGATTCAAGTTAAGAGTCTCGAACAATTACTGGATAAATCGAATTCATCGATCTACAATGAGCCATCACAAACAACATcgaaaaatttaaaccaaactACAGCTCCCACTGATCATCCATCACCCATTGATTTAAGCATGGATGCACTTGATTTaagcaaaaaaccaaatagTGAAAAACCCGTGGGATTACCACAGGCAACCAATGAAACAGAATTGAATTCTcttggtggtggtgctggtgctggtaGCATAGGTGCTGCTGAGCCCAAATTTGATTTTGCCATGCTCGAGAAGAACCAACAATTATTACTTGCTCAACAGCAGCTCTTGAATGAAGCATTTCCAAAGGCACTCGTTGATCCAGCTCAATATTTCCAGCAATTGTATCGCAACCTTGTATTTCAACCATTGAATCCCTTCTTCTTGCAAAACTCTTTCATGCCCAATCAGCTCAATGATTTGCAGAAATTTGCACCGCTCATGAGTCGCATGTTTGGTAATGCAGCCGCCAATAATGGCAGTACAACCTCAGGAGCACCGACCAGCTCCTCCATTAATGTAAATGATGCCATCAATAAACACAATGCCACCAACTCGCCAACTACATTGTTGCCACAAATAAGTCCATTAATGGCAAGTGATAAATCGAGTACACAATCTTCACCGAATTCGATTGCCGCTCAACTATTACCCAAGTCAATGCGATCATCGCCTTCAGCAGCTCCATCAACAGCAAATAGTGGTGGCGCTTCATTGAATATACCACGCCATccacatcatcagcatcatccaCATCACCATAACATTCCGCCGACTGTACTATCAGGTGGCCCAGTTAAAATGGTCATCAAGAATGGTGTACTCATGCCCAAGCAGAAACAACGTCGTTATCGTACTGAGCGACCCTTTGCCTGTGAACATTGCTCCGCTAGATTTACCTTACGCTCAAATATGGAACGTCATGTCAAGCAACAACATCCCCAGTACTATGCCCAACGTCAACGTAGTGGTCATCATGTCATGCGTGGTCGTGGAGCATCCAgcaatgctgctgctgctgccatgAATAGTTTCAATCACTTGCAGGCTTTTGCTCAAGCTCAAAGTAGTGCTCATCATGGACATCTCACACCAAGCAAAAGTGGAATAGGTGCCGCTGCCTCCTCACCCATCTCAGAGCAAGTGAAATATGCAATTTTAGCTCAACAACTAAAAGCTCGTAAAGATACTGATTTGCTGCAACAAGCCTTGGCTCATGGTTCCAGTAGTATAGCAGCGAATCATTTATTGCTTGGAAgtagtagtggtggtggtgtagGTGCTGATGTTGCTCCCGGTGCAACTGTTGGTGGACCCATGTCTAATAATATGGGTCAAGGACAGTTTAGCTTTGTCGCTCACATGAATCACAGCAATCAGAGTAGtaacaatgaaacaaatgcCAATGGTGCCATGGAAGACGATGAACCCAAGTTGATaattgatgaagatgatgaacatgatgatgaagatgatgatgatgatgctgatgctgatcaTGATGACAATAACGATCGTGATAATAATGCTGCtgataacaatgatgatgatgttgaacaaattgatgatgatattgaggTTATaccagatgatgatgatgataatgctgaCGATAATTCTGATGATGCTATTgctaataaaaatgaaactattcatcatgaaaatgaaaaaattaaagctgCTGCTACTCCAGTTACTGCTACTTCCTTGCCTTTTAAACCAATGGAAGTTAAGCCTTTGTCAACTTATAAATCTAAAGAGAAACATGAATCTGCCAAGAGAATGGCTGAAACCATTCTAGAGCAAGCTATCAAAGCTGGTCTAACGACACCACCAACATCATCCAAATCAACCCCAACACCAACAAAGCAAGTGATCAAATTGaatgatgaaacaaaaacagcaataccgacaccaacatcaacatctcACACCAGTGGTGGCTCGAAGGCTCAAGCCATGAAATCAATGATTGCTCAAGCCGGTTCAGTCGGTAAATTTCTTAAAGAGGTTGCCAGTTCGCCCTTCAAAGATGAGTCTCAAGATCTTGTGCCTGTCTCAAAGCTCGTTGACAATGCCACCAGCAATCAAATGTCCTCGTTCAATACATACTTTCGTCCTAGCGATGTGGCCAATCACATGGAACAGAGCGATGAAGAGGGTCTAGTTGCATCTGGTAGTGCCAGCGAAAGCAATAACTCTGGCACAGAGGATGTCACCGCACCAGTTGAACCCAAAAAGAAGTCAGCCTATAGTTTGGCACCGAATCGTGTCTCATGTCCCTATTGCCAGCGTATGTTTCCTTGGTCTAGTTCCTTACGTCGTCATATATTGACGCACACTGGTCAGAAGCCATTCAAATGTTCACATTGTCCACTCCTGTTTACCACAAAGAGTAATTGTGATCGTCATTTGTTACGCAAACATGGCAATGTTGAGTCAGCCATGTCGGTCTATGTGCCCACTGAAGATGTCAGTGAACCCATACCTGTGCCGAAATCCGTTGAAGAAATCGAACAACAGCAACGTCAACGCGAAGAAGAGGAACGCCGCCGCAAAGCCGAAGAGGCACAATTGGAACGTGAACGTCGCGAACAAGAGAGACGCCAACAACGCGAACAGGAACAACAGGAGCATTTACTCAAACAAATTGCTGCAGCCGCACAACTCAATCAATTGAGTGCAGCAGCCGCTGTTGCTGCAGCTGCTGtcaatgctgctgctgctgttgctaatTCTGGTAACAAAATCGAAACTAATAATGCTAATTCCTCATCTTCTcctggtgctggtgctgcaGTTGGTTCTACATCTGAGGCTGCCGCTTCAAGTGATTTGCCTTACAAGTGTCATCTATGTGAAAGTTCATTTGGAGAACGTATACAATGCCTGGAACATATTAAGAATCAGCATGCCCAGGAGTTTGCATTATTGTTAGCAAAAGGTGCCATTGAAACTGATGTTGAGCCACAACCCTTACATGCTGCTCCTACTGCTATAGCCACCGATGAAGATGAGCGCGAGCGAGAACGTGACACAAATGCAGGCaaatcctcatcatcatcatcgggtAAATATCCTGATTATAGCAATCGCAAAGTGATTTGTGCATTTTGTGTGCGTCGTTTTTGGTCCACCGAGGACTTGCGTCGTCACATGCGTACACATTCCGGGGAGCGGCCATTTCAATGTGAGATTTGCTTACGCAAATTCACATTAAAGCACAGCATGTTGCGTCATATGAAGAAGCACAATGGACGTCAATATAATGGTAATTCTGGTTCAGATTTCTCTGATGATGAACAAATGACAGCAACACCACCCCCATCTTCACTAATGccaccgtcatcatcatccacatccacatcatcatcctcCTGCTCCTCCTCTACAGTGATCAGTGGTAAATCAACAATTTCGAATGCCAATCCCAATGTCAATACGGTGGTAGCCATGTCAAATGCATTGGGTGCCATGCATGCACCCAAAATCCAAGAACTACTCAGCAAGGCCAGTGAGTGGCGTTCAAGTCGTTTGGGTGagcataaagaaaatatagcATCCACTCTGCCCGATAAtgatcaacatcatcatcataatcatcatcaatatggtaacaataacaacaataacaacaacaacaacaacaatgcacAACAAAGTGGAGATCTCATAGGAAATTTGCTTGGGATCAGCGATCAaggtatattaaataaattgctttCATCAGCCGATGAGGCAGCCAAATTTTTGggtgttgaaaaataa
Protein Sequence
MLATQQHAKTTTTTTAKTTPAATTTESEIQKIKMERRDSTTSESSVEQLDLGRTPKKLSAHSATTSTPHSKKNNSNTNKIATTTTSTSNGGLDILTTATTRKRKLRCTKDSEEDDDDDDDNIIDGDHDHDHDDNDDDDDGVEEEMVENLVKIKTENEDHNNVDDDDDDAAADADGDNNDHSTAVKKHQRTHKRRRASSNPHRLDKRSGGINAIVQLITDSESGNSLRKKFRFNRSNLDQQQQQQQQQQLSNNESGFVDASGNGSQYSLNANVSVASSSGGSSPHGVSSPESLSGAEHHHQHHHLHHQPHNEHMKFVCPICEVVSATPHEFTNHIRSHNYSSGDTENFTCKICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQQNHQRRNSNGTKNNGGGGSAATQTSTTSAAAATATPNALTSTSASSSRGGGGGGGGGNEGVNKQQTAMVNGLVGGIGISSAAGNGGKRRLNGSSGGSGSVGNIESYESDDGSCSMDSTSANSQSSSNNNNNNNNNNNDNNLNNNNSNHHHHHNNNNNNNNNLKANNNLKRKKRDSRDLQLNVVVDDNNTTSTTNNTKAATTTEVVNDNESAATAIGGDDDDNDDDATTLATPGDNDKLVLMTTGGTTKHRRVKTTINNNIIETEAEEEANINNNHDNHDDDDCDVNDDHDDDDDNVDVDDVDNHDGDDEINEINANIMDQDGDDADIITSTPDVATVAVGAEPEESTTIRKVNSAEYQLDPTLSCPVCKLVDFVCLRDLGIHMDHSHPNIPTKCRRCKVVFRTHRQLHTHPCTKKLKNTLKALEKLKKLEKRSSSPINPRTSANQLNFSSDFHDDDDDDDNEADSTDFESADGNSDDDNNDAAADHQIEVSHRNQQNVSQHNDDDDNDDDDDDIEGNADDGNGDNDADDHQIVSSDLQRREELLRQLYLKNNKTAVRMLSPIYNDEPSDNTSSLLKYEVADTKQSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSCDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDPVKKLHLFNGSSDFDDDEMTNATAVAIGTGAFQSLYHQPKDRSTPVSHLKEMLLADHHHSHHGHSHSHAQAVNNKPLKIQVKSLEQLLDKSNSSIYNEPSQTTSKNLNQTTAPTDHPSPIDLSMDALDLSKKPNSEKPVGLPQATNETELNSLGGGAGAGSIGAAEPKFDFAMLEKNQQLLLAQQQLLNEAFPKALVDPAQYFQQLYRNLVFQPLNPFFLQNSFMPNQLNDLQKFAPLMSRMFGNAAANNGSTTSGAPTSSSINVNDAINKHNATNSPTTLLPQISPLMASDKSSTQSSPNSIAAQLLPKSMRSSPSAAPSTANSGGASLNIPRHPHHQHHPHHHNIPPTVLSGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRQRSGHHVMRGRGASSNAAAAAMNSFNHLQAFAQAQSSAHHGHLTPSKSGIGAAASSPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSIAANHLLLGSSSGGGVGADVAPGATVGGPMSNNMGQGQFSFVAHMNHSNQSSNNETNANGAMEDDEPKLIIDEDDEHDDEDDDDDADADHDDNNDRDNNAADNNDDDVEQIDDDIEVIPDDDDDNADDNSDDAIANKNETIHHENEKIKAAATPVTATSLPFKPMEVKPLSTYKSKEKHESAKRMAETILEQAIKAGLTTPPTSSKSTPTPTKQVIKLNDETKTAIPTPTSTSHTSGGSKAQAMKSMIAQAGSVGKFLKEVASSPFKDESQDLVPVSKLVDNATSNQMSSFNTYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTAPVEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIEQQQRQREEEERRRKAEEAQLERERREQERRQQREQEQQEHLLKQIAAAAQLNQLSAAAAVAAAAVNAAAAVANSGNKIETNNANSSSSPGAGAAVGSTSEAAASSDLPYKCHLCESSFGERIQCLEHIKNQHAQEFALLLAKGAIETDVEPQPLHAAPTAIATDEDERERERDTNAGKSSSSSSGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGRQYNGNSGSDFSDDEQMTATPPPSSLMPPSSSSTSTSSSSCSSSTVISGKSTISNANPNVNTVVAMSNALGAMHAPKIQELLSKASEWRSSRLGEHKENIASTLPDNDQHHHHNHHQYGNNNNNNNNNNNNAQQSGDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00063056;
90% Identity
-
80% Identity
-