Amin017512.1
Basic Information
- Insect
- Amiota minor
- Gene Symbol
- -
- Assembly
- GCA_037043295.1
- Location
- JBAMAW010002167.1:2893082-2899738[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.014 1.5 10.1 3.2 1 23 1549 1572 1549 1572 0.91 2 12 0.00022 0.022 15.8 2.7 2 23 1808 1829 1808 1829 0.97 3 12 8.4e-05 0.0085 17.1 0.2 3 23 1837 1857 1835 1857 0.98 4 12 1.3e-06 0.00013 22.8 2.7 2 23 1864 1885 1863 1885 0.97 5 12 9.4 9.5e+02 1.2 0.3 5 23 1898 1916 1896 1916 0.96 6 12 2.1 2.1e+02 3.3 5.5 3 23 1923 1944 1921 1944 0.93 7 12 0.061 6.2 8.1 0.1 2 23 1955 1975 1954 1975 0.96 8 12 0.00012 0.012 16.7 0.4 1 19 1981 1999 1981 2003 0.95 9 12 1.8e-05 0.0018 19.2 2.1 1 23 2011 2033 2011 2033 0.99 10 12 0.00013 0.013 16.6 7.6 1 23 2039 2061 2039 2062 0.96 11 12 0.00024 0.025 15.7 5.4 1 23 2067 2089 2067 2089 0.98 12 12 0.0021 0.21 12.8 6.0 1 23 2095 2117 2095 2118 0.96
Sequence Information
- Coding Sequence
- atggTTGCTAATGTACAGTGCCCCGTGTGCACGCTGTATTTGCATGCGGGTATGAATCTCTCTGATCATTTGGAGACACATCCCAAAGAACAAGTTATAAAGGCTCTTGTACAAATGACGATCTCGGGTGGAGCTGGTGGTGCTGCAGCATTGGCCAGTGTATTAACaaatagcagcagcagtgaTAATAAGATGATTGAAGAAGTTGGAGTAGAAGGAAGAGTAGCTTCTACTGATGTTAAGCCAATTATTGTAGAAGATTGTATCTCAAAGAGTTTAGCTGAAACAAaaacgacagcaacaacaacgccaACTGtgacatcaacagcaacaacatcaaaaaattaCCACGATGAGTTCAGTACTTTTACTAGCTCAAgcatgaaaattatgaaagcGACATCATCTGCAAATGCAGCATCAGAAGCAGAAACGATAGTTGCAGCATCCACAATTAGTTCCTTTTCTAATGCGACGACAGCAGATTCATTACTCAATCCACCGTTTAAGCATAAACGTATTGAATCGGCCCCGTCAGAGGCAGCACTGCCATTGAAGTCTATTTCTGTTGAGTCTACTGATCAGTCCAATCAACAGCACATTCGCACAAGAACAAATGCCGCTTACCAAACATTTTTCAGCGGTTCCAATGCGACCAATCAAGTCTATGAGCAACCGCAGTTTTcattgcaacagcagcagcatgttACCGAAACAGGAGTTAGTCAATTACACACGCAGACGACTGTCAATGTTCAACGTAGTCTAGTGGATACGTCAGCGTCGCTATTGCCCCCACCATCAATACAGGTTAGAAATGGTTACAATGGAACGCTGCTTCAAGCGACGCCGtatcaacatcagcaacaaaatacACGCCAGCAAattcatcaacaacagcagcagcaacagcaaacaaacCTGAAACTTGTTTATTCGCCTGCTCTGCCTCCACCGCCACCTTTACAGCTCTTTACACAACAATCGCCACAACACCAGAAACCACCGCCAGCTTATGGGACTGCAATCAGTCAAATTCGATCTCAACATAACCAAAATagacaacaacaccaacagcagcatcaacaacagcagatcACTCTACATCAAATTTCACCACCTATGCCGTCATCTGTTGCATTAACGAGTACATCATCTACTAcatcaaccaacaaacaacatttgccgCAAGTGAAGAACAAATATGATGGCGATGCTATGCCATTTATTTCTCTATTACCaccagaacaacaacagcagctgAACACTCAGTTCCCACATGCAGGTCATCATTCAGCATTGTCGGCTCATGTTTTACCAAATGTTGCAATGACAATGTCGCCGTCATTGTTATCACAAAAACTCATTCCTTTAGCCAACACACCGTCCGCATTAACCCGCCAAACAAATTCTCCCATGAGCAACAATGCAATTGGAATGGCTGCAGCACCATCACCTTCACCATCTGTACTACGCTATGCTGAATCACCGGTAGCACACTACCTAGAACGCGATAATGGCGATTTTATAGTACAGGAAACTCCGAAGCATATTGTCGAGTGTGTTGAGAAAGATAATGGAGAATTCTCTGTGATTGAACGTATATATCATTCGCCGCCAAGCGTATTGCACATACACGATGACGAAGACGACGATGgggatgatgaagaagaagaattccAAGATAATGATGCCGCCAGTAGTAGTAAATCAACGCCAATAAAAAAGcgacaaacaaaaactttaaagaAACATCAAAATTCTGGAGTGGGAATAGGACATAACAAGAAATCTTTGCATAAAAAATCCCATTCACATCAATTAGATGACGATGAGTTTATGAGTCTTAGTAGTGGCAGTGAAAGTAACACAGAGGATGAAAGTAATACGTCGATGTGCGCATCGCTCAAAGCGCCGGTAAATCAGACAAGTGATGGTCTTTCGAAAATTACAAATCTTCAGCAGCAGAATCAGCAAAATCAACAGGCAACATTACTATTTGGCACTGCGCCATCGACAAGTGCggcagctgcagcagcagcttcaAATACTAGCTGTTCCAATGAAAGTTCAACTAGTTCTAGCAATAATGGACGTAAATCTAAAAAGAACACAATTACGGTATTGAGTGACGTTCCTCTGAATATGAGCGAATATTTGGATTTAGTAGGGAATATTCTTGCATCTAATAAATTTACCAATCAACGTCCATTTACGGCAATGGCACCAGTTCCCGTTGTTAAGGTTGAGAAAGAAGAACCCGTTGATGACTACGACGCACGTCAACATAATTATGTAAAGCATGAAGAAGGAGCATCACAAAATACATCAACAATAGCAGAACTAGCAACACGATCTATGCAAGACATCATACCACCTGATATACCAAATGCCAATGAGACAGAGACTGATGATTTTGTGgtaaatagtaataataagcaaaaatttgATGACCAAAAGCCGCCGACTATTGATGTAGAGTtgccgcaacaacaacaacaacagcagcaccaacaacagcaaatgccATCATCAATACAAGAAGCATCATCTTGTAATTCTGGCTCTGGCTCTAGCAGCAGTATTCATGTCACAACGAGTGTAATACGAATGGCAACAACGACAGCAACTAGTCAGCAACAACAGGCACATCCAGGAGCTGAAACTGAAACACAAATGTTATGTGATCCTTTGGAAATCAAACATACTGTGCCAGAAGATCTTACGCAGCCTCTAATGAAAATTGAAGTTGAGCCAACAAGCCTTATACCGCAATCATTTCCACCACCGCCATTGAAACAACGTGGTCCAAAAAAACTGATTATCAAGCCAAAATCGACACCTAAGAAAACTCAAAAGACTGATGACGACAACGTTGCTTCGACATCCAATGCTGCTGCTTCGACGATACCAAGAACAGATGATATAATCTATGTAAAGAATGAGCCAATTACTAATGCTTACGATGGTCCACCAAGTTCGAACAGCATCCTAGAGAATCATTTAAAATCGTCTTCTTCAAGTACATTAAAAATAGAAGcgggtaaaaataaaaatgatatgtCTGAGCTTCAAGTTATAAATACCAATGCCGAGGATGCTCGTGTTTTGCTTGAGTTCGCCAACTCAAAGCAACATGGCATTCCACATCATGCTTCAACTTCATCGGAAGCAATGCTAACTGTTAATACCAGTGGCGGCACAATACAAATACCATCATCATTGGCCACATCAAACAATTCAAATCCGAATTTTCCTTCTGCTGGTTCCGTGTTTTCCACAAACAACGCAAATGCAGCAATTTCTAATCCAAATGGAGGAAATTCAAGAAAACATGTTAAGAGTGAAGAATACATTTTACCTGATAATGATTTGGATGAAATTGTGAtatcctcatcatcatattcTTCACAATCAGCAAGTGACGTTGTTGCCAACCAAaatcaccaacaacagcaatccCAACTGCCAGTTGATGTTATGTCTGCCCATAGTGGTCACTCATCGcataatttcaatgatttcaatttcCTATACAATCCTGCAAGTGTAACACCTTATGTAGTGGGAGCCAACACAAAAGGTACGTCCAACTTTACACCATTCGCatatcagcaacaacatgcACATGATGCGACTACGGCCGCCACTATTGCCTCCTCCACTTCTGCTTCGTCAGCAATTCTTGAAGATTCGCTTAGTGGTTCATCGCGTTCTCGATTAGTACGCGAACAGCAATCAACAATATCGAATGCAGCTACAGCAGGTTCATCATGGTATCAACTACAGCAGTCGGCAGACTTTAATCCAGCACTCGCAGTAGACTGCAGTGCTGCCATTGATGGGGTAGCGGATGTTGATGGCAGCAAATATCTTGATTTGGATACTTGCAAACGGGAAAATATTAGCGGTAGCAATTCGCATGCAACATCAAATTTGTTGCCACCATCATCGGCATCATCTTCGGCATCTTTTATTGCTGCTGGAACCGAATGTAGTTTGGCTGGCGGTTGCACTGTAGATGCCCTCAATATACGCACCGACGAAAAGATGCCAGCAAAGGGAGAAATATCAGAGCAGGAAAGTAATTGTGACATTGAGAATTCATGGAGTCAATCGATGTATTGCGATATGTCATCACGTTTATTTAGGACGTCATTTCCTGGAGCTTATGGTCAAGATAATGGTTGGCATCATGACCAATATTTTCCGGCGCAGGATTTAAGCATAGCAAACGGTGCAAATGATCAGAAACCAGCAAAGAGCTTTGACTTTCGTCTTCCGATCGACGGAACTACCTCAACCATAGTGACGCATGCAACTAATTCTCAGAATATGCAGATATTTCCACAAAACAACGATAGCATTCCGTCAACGTCGAAGGCTTCAAAAAATAAACGGAAACGCGTTACACAAATGCCCACATCGACAATTACGTCACAACAAATGTTGCTccaacagcatcagcagcagcttCAGCAACAGCTGCAGCAGCATCACCCTAACCACTTGGAGTTGCATGATTCTCAGCCCACCACATCGGCCACATTGTTGGCTGGTCCACCAAATGAGTTATCAGCCGTTTTAGCCGCTGGCGGCCCAATCAACAGTCTGTTAACTCCTGTGCGAAGACAGCGCAAAGTTTATAAATGTGACCATTGTCACACTGTCTTCCGCAAGCTTAAAGATCGTACAGCCCATTTGGTTGAAGAGCATAATTATATACGTAGAAATCGACGACTTGTTTGCGTACAGAGTGTGGTTACATCAACGATAACAAGTATTGATATGAGTTCTGCTGCCGCTGCCGTAGTTGCTTCTTCCAGTGGAAATATCTTACCAACACttccaccaccaccgccaacAATGTTGCTGGCACCGCCACCAGAAGAAAACGCAGATGAAGCCGAAGACTTAAAGCATCATATCGTTGAAATCAAAATGGAGCATTGCAGtgaacaactacaacaacagcaacaacagcaggaacaacaaatcaataatgttATAATCGACgaagagcagcagcagcaacagcaatcaTTAGCAACATTGACAATCAGTGAAAATAAAGTAGAAACCAAGACAGAATATGCCGATGTAAAAGACTCATCATTaacagcggcagcagcaaGCACCTCTGGCGGTGGTGCAATTGTTCCACATGAACATGTCGTTGCCGAATTGGATACGAAACCAAATCTAGAGTCCCCATTCTTTGGCAAACATATTCCAGCATCAAAATTATCCGCGCTCTATCGCATGTTGACAGGCTACAATATATCGAAGCTGAAGCAAGGACGCCCCCTTAGTGAATTGGAAGAAAAAGTTATGGAGAACTCAATACTTTTATGCTATGTTTGTCGCACTAACTTCCCATCGGTTAAATTATATGATGCTCATTTGACAGAGCATCCCGCTGAGTGCTTTACATGTGGCAAAAAGTTCTATcgttggaaaaacttttctttgcatttgaaaCGTCATCTGGGTTGGAAGGAGTTTGGCTGTTATGTATGCGATAAGAAATTTGTGGTACGCAGTGCTTTGGTGGAGCACATGCGCATGCATACTGGGCAGACACCACTGAAATGCGGAGTTTGTGGCAAACGATTTAAACGCTACTCAAATCTGACGCAACATCGCAAACGTCATACGAGGCAAATCGTACGCAAGAAGGAATACGTTTGTCATTGTGGCGAAGTGCTACCCTCGAAGGCCCGTTATCTGTGGCACAAGGAAACACATGACTCGAAGCCGAAATGTTGTCCGTATTGTTGTGATCGCTTTATACATGCTAATTCGTTGCGCCGTCATATACGCCTTGCACACTCGGATAAATTCGACTATACTGAGCCCATGGAATGCCCCATGTGCAAGCAAGTGTTCGCTAAGACCTCTATAAAGGCACATATGGCTACCCATTCAATGAGTACACAATACGATTGTGTTATTTGTAACAAGTCTTTTTCAACCAAATGGAATCTTAAAATGCACTCCTGGGTTCATGCTAATCGCACGGCGAAACCATTCAAATGTGAACATTGTCCAAAAGCATTCGTACGCGAGTTAGATTTCAAGAATCACATGAATTCTCATAAACAGATCAAACCCTATACCTGCGAGTATTGCGGTTGTAAGTTCATACGTAAGTACAACTACATGCGTCATCGACGTGAACATCATGGCAACAAAAAGTTTACTTGTGATCTGTGCGATAAATCATTTCATCGACACTACTATCTCATAGAACATCGACGCATACATACCGGCGAGCGTCCATTCCAGTGCACAATTTGCGGCAAGAGTTCCACGACAAAGACAAATCACAACAAACATCTCAAAATCCATCACTCACGTGATCCATTTACTGTGGAAGTGTAA
- Protein Sequence
- MVANVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTISGGAGGAAALASVLTNSSSSDNKMIEEVGVEGRVASTDVKPIIVEDCISKSLAETKTTATTTPTVTSTATTSKNYHDEFSTFTSSSMKIMKATSSANAASEAETIVAASTISSFSNATTADSLLNPPFKHKRIESAPSEAALPLKSISVESTDQSNQQHIRTRTNAAYQTFFSGSNATNQVYEQPQFSLQQQQHVTETGVSQLHTQTTVNVQRSLVDTSASLLPPPSIQVRNGYNGTLLQATPYQHQQQNTRQQIHQQQQQQQQTNLKLVYSPALPPPPPLQLFTQQSPQHQKPPPAYGTAISQIRSQHNQNRQQHQQQHQQQQITLHQISPPMPSSVALTSTSSTTSTNKQHLPQVKNKYDGDAMPFISLLPPEQQQQLNTQFPHAGHHSALSAHVLPNVAMTMSPSLLSQKLIPLANTPSALTRQTNSPMSNNAIGMAAAPSPSPSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKDNGEFSVIERIYHSPPSVLHIHDDEDDDGDDEEEEFQDNDAASSSKSTPIKKRQTKTLKKHQNSGVGIGHNKKSLHKKSHSHQLDDDEFMSLSSGSESNTEDESNTSMCASLKAPVNQTSDGLSKITNLQQQNQQNQQATLLFGTAPSTSAAAAAAASNTSCSNESSTSSSNNGRKSKKNTITVLSDVPLNMSEYLDLVGNILASNKFTNQRPFTAMAPVPVVKVEKEEPVDDYDARQHNYVKHEEGASQNTSTIAELATRSMQDIIPPDIPNANETETDDFVVNSNNKQKFDDQKPPTIDVELPQQQQQQQHQQQQMPSSIQEASSCNSGSGSSSSIHVTTSVIRMATTTATSQQQQAHPGAETETQMLCDPLEIKHTVPEDLTQPLMKIEVEPTSLIPQSFPPPPLKQRGPKKLIIKPKSTPKKTQKTDDDNVASTSNAAASTIPRTDDIIYVKNEPITNAYDGPPSSNSILENHLKSSSSSTLKIEAGKNKNDMSELQVINTNAEDARVLLEFANSKQHGIPHHASTSSEAMLTVNTSGGTIQIPSSLATSNNSNPNFPSAGSVFSTNNANAAISNPNGGNSRKHVKSEEYILPDNDLDEIVISSSSYSSQSASDVVANQNHQQQQSQLPVDVMSAHSGHSSHNFNDFNFLYNPASVTPYVVGANTKGTSNFTPFAYQQQHAHDATTAATIASSTSASSAILEDSLSGSSRSRLVREQQSTISNAATAGSSWYQLQQSADFNPALAVDCSAAIDGVADVDGSKYLDLDTCKRENISGSNSHATSNLLPPSSASSSASFIAAGTECSLAGGCTVDALNIRTDEKMPAKGEISEQESNCDIENSWSQSMYCDMSSRLFRTSFPGAYGQDNGWHHDQYFPAQDLSIANGANDQKPAKSFDFRLPIDGTTSTIVTHATNSQNMQIFPQNNDSIPSTSKASKNKRKRVTQMPTSTITSQQMLLQQHQQQLQQQLQQHHPNHLELHDSQPTTSATLLAGPPNELSAVLAAGGPINSLLTPVRRQRKVYKCDHCHTVFRKLKDRTAHLVEEHNYIRRNRRLVCVQSVVTSTITSIDMSSAAAAVVASSSGNILPTLPPPPPTMLLAPPPEENADEAEDLKHHIVEIKMEHCSEQLQQQQQQQEQQINNVIIDEEQQQQQQSLATLTISENKVETKTEYADVKDSSLTAAAASTSGGGAIVPHEHVVAELDTKPNLESPFFGKHIPASKLSALYRMLTGYNISKLKQGRPLSELEEKVMENSILLCYVCRTNFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCGVCGKRFKRYSNLTQHRKRHTRQIVRKKEYVCHCGEVLPSKARYLWHKETHDSKPKCCPYCCDRFIHANSLRRHIRLAHSDKFDYTEPMECPMCKQVFAKTSIKAHMATHSMSTQYDCVICNKSFSTKWNLKMHSWVHANRTAKPFKCEHCPKAFVRELDFKNHMNSHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDLCDKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00061405; iTF_00062263;
- 90% Identity
- -
- 80% Identity
- -