Amar016131.1
Basic Information
- Insect
- Amiota mariae
- Gene Symbol
- -
- Assembly
- GCA_035041805.1
- Location
- JAWNKV010000361.1:2147852-2154728[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.021 2.8 9.5 2.9 1 23 1596 1619 1596 1619 0.91 2 12 0.00022 0.029 15.8 2.7 2 23 1879 1900 1879 1900 0.97 3 12 0.0003 0.039 15.4 0.2 3 23 1908 1928 1906 1928 0.98 4 12 1.3e-06 0.00017 22.8 2.7 2 23 1935 1956 1934 1956 0.97 5 12 9.6 1.2e+03 1.2 0.3 5 23 1969 1987 1967 1987 0.96 6 12 2.1 2.8e+02 3.2 5.5 3 23 1994 2015 1992 2015 0.93 7 12 0.063 8.1 8.1 0.1 2 23 2026 2046 2025 2046 0.96 8 12 0.00012 0.015 16.6 0.4 1 19 2052 2070 2052 2074 0.95 9 12 1.9e-05 0.0024 19.2 2.1 1 23 2082 2104 2082 2104 0.99 10 12 0.00013 0.017 16.5 7.6 1 23 2110 2132 2110 2133 0.96 11 12 0.00025 0.032 15.6 5.4 1 23 2138 2160 2138 2160 0.98 12 12 0.0021 0.27 12.7 6.0 1 23 2166 2188 2166 2189 0.96
Sequence Information
- Coding Sequence
- atggTTGCTAATGTACAGTGCCCCGTGTGTACGCTGTATTTGCATGCGGGTATGAATCTCTCTGATCATCTGGAGACACATCCCAAAGAACAAGTTATAAAGGCTCTTGTACAAATGACGATCTCGGGTGGAGCTGGTGGAGCTGCTGCATTGGCCAGTGCATTAACAAATAACAGTAGCAGTGATATTAAGAAGAATGAAGGAGATGGAGAAGATGAAGAGGAAGAGGGAGAGGGAGAAGGAGGTGAAGGAGAAACAGCAGCTTCTACAGATGTCAAGCCAATTATTGTAGAAGATTACATCTCAAAGAGTATAGCAGAGACAAAAactacagcaacaataacaccaACTGTGACAGCAACAGAAGGAactgcagcaacagcaacaacatcaaaatcatACCACGATGAGCTCAGTAGTTTAACTAGCTCAAGCATGAAAACAATGAAAGCGACATCATCTGCAAATACTGCGACAGGAGGATCAGCTGCTGAAACGATAGGTGCAGCATCCACAATTAGTTCCTTTTCTAATGCGACGACAGCAGATTCATTACACAATCCACCGTTTAAGCATAAACGTATTGAATCGGCTCCGTCAGCGACGGCACTGCCATTGAAGTCTATTGCTGTTGAACCTACTGATCAGTCCAATCAACAACACATTCGCTCAAGAACAAATGCCGCTTACCAAGCATTTTACAACGGTTCCAATGCGACCAATCAACTCTATGAGCAGCCACAGTTTTCTATGCAGCAACAGCATGTTACCGCAACAGGAATTAGTCAATTACAAACGCAGGCCACTGTCAATGTACAACGGAATCTAGTAGATACATCAGCGTCGCTATTACCCCCACCATCAATGTCCAATATTCAGCTTAGAAACAACTACAAAGGGACGCTGCCTCAAGCGACGCCgtatcagcatcatcaacataataCACGCCACCaaattcatcatcaccaacaacaacagcagcaacagcaaacaaacCTTAACCTTGTTTATTCGCCTGCTCTGCCTCCACCGCCACCTTTACAGCTCTTTACACAACAATCGCCACAACACCAGAAACCACCGCCAGCTTATGGGACTGCAATCAGTCAAATTCGATCTCAACATAACCAAAATagacaacaaaaccaacagcaacagcaacatcagcagcatttgcaacagcaacagcaacagattTCTTTACATCAAATTTCACCATCTATGCAGTCATCTGTTGGATctgccacaacaacaacaagcaaacaacATATGCCCcaaatgaagaataaatatGATGGCGATGCTGTGCCATTTATTTCACTAttaccaccatcatcatcacaacaacagcatctgAACACTCAGTTCCCACAAGCAGGTCATCATTCAGCATCATTGCCCACTCATGTTTTACCTAATGTTGGAATGACAATTGCGCCGTCATTGTTATCACAAAAAGGCATTCCTCTAGCCAGTACACCGTCCGCATTAACCCGCCAAACAACTTCTCCCATTAGCAACAATGTAATTGGAATGGCGGCAGCGCCATCACCTTCACCATCTGTCTTACGTTATGCTGAATCACCGGTGGCACACTATCTAGAACGCGACAATGGCGATTTTATAGTACAAGAAACTCCGAAGCATATTGTGGAGTGTGTTGAGAAAGATAATGGTGAATTCTCTGTGATTGAACGTATATATCATTCGCCGCCAAGCGTATTGCACATACACGATGATGAAGACGACGATGgggatgatgaagaagaggaaTTCCAAGATATTGTGGCCGCCAATAGTAGTAAATCAATgccaacaaaatattcaacaaaaaagcGACAAACTAAATCTCTAAAGAAGAATTCTGGAGTAGGACATAACAAGAAATCTTCGCATAAAAAATCGCATTCAAATGAAGATGAGTTCATGAGTCTTAGTAGTGGCACTGAAAGTAACACAGAGGATGAGGAGATGGGCGCATTGTCGTCAATCTCAACCAAAGCTTCACTATATCAGcctaaaaatacaaatcatcagcagcagaatcaacaaaatcaacaggCAACGTTACCATTGTCCACAGCTCCATCGACAAgcgcagcagcggcagcagcagcttcaaatgaaagttcaaCTAGTTCTAACAATAATGGACAACAGCCACCCCGTAAATCTAAAAAGAACACAATTACTGTATTGAGTGACGTTCCCCTCAATATGAACGAATATTTGGATTTAGTTGGCAATATTCTGGCATCTAATAAGTTTACCAATCAACGTCCTTTTGCGGCAATGGCACCAGTTCCCATTGTTAAGGTTGAGAAAGAAGAACCCGTTGATGAGTTCGATGCACGTCAGCATAATTTTGTAAAGGATGAGGAAGAAGCTTTAGAAAATATATCTACAAAAGAAgaaccagcaacaacaaaatctatgCTGCTGCAAAATACCATACCACCTGTTATACCAAAAGCCAATGAGACTGAGACTGATGATTTTGTGGAAAATAGTGATAATAAGCAAAACTTTGATGACCAAAAGCCGCCGACTATTGATGTAGAAAcgccacaacaacaatcaatacAAGAAGCATCACCTTGTAATTCTGGCTCTGGCTCCtctagcagcaacagcagcagcagcattcaTGTCACAACAAGTGTAATACGAATGGCAACAACGACAGCAACTagtcagcaacaacaacaacaggcacaTCAAGAAGCTGATACTGAAGCACAATCACAATGTGATCCTTTGGAAATCAAACATTCTGTACCAGAAGATCTTACGCAGCCTCTAATGAAAATTGAAGTTGAGCCAACGCGCCTTACACCGCAAACATTTCCACCACCGCCATTGAAACAACGTGGTCCAAAAAAACTGATTATCAAGCCAAAATCGAAACCTAAGACAACTCAAAAGACTGATGACGACAACGTTGCTTCGACATCCCATACTGCTGCATCGATATCCCATTCTGCTGCATCAAAATccaatgctgctgctgcttcaaCGATACCAACTACTGCAGATGATATAGTCTATGTAAAGAATGAGCCAATTACTAATGCTTATGATGGTCCATCAGCATCGAACAGCATCCTGGAGaatcatttaaaatcatcTCCTTCTTCAAGTACATTAAAAGTAGAATCgggtcaaaataataataataacaataataagaatcataataatgatatgTCGTCTGAGCTTGAAGTTATAAATACCAATGCCGAGGATGCTCGTGTTTTGCTAGAGTTCGCTAACTCAAAGCAACATATTGTTCCACATCATGTTTCAACTTTATCGCCAGCAATGCTAACTGTAAATACCAGTAGCGGCTCAATACAAATCCCAACAAACAACTCACTTACGAATTTCCCTTCAGCTGGTTCAGTGTTTTCCACTAACAACACAATTACATCAATTTCTCATCCAAATGCAGGGAATGCAACAAAACGTGTTAAGTGTGAAGAATATATTTTACCTGATAATGATTTGGATGAAATTGTGAtatcctcatcatcatattcTTCACATTCAGCAAGTGACGTTGTTGCTGCCgcacaacaacaccaacaacagcaatccCAACCAATGCCAGTTGAGGTTATTGCTGCCCACTCAGCAcataatttcaatgatttcaatttcctATACAATCCTGCTAGTGTAACTCCTTATGTAATGGGAGGCAACACAAAAGTGACGTCCAACTTTACACCATTCGCatatcagcaacaacatcatgcACATGATGCAACTACGGCCGCCACCATGGCATCCTCAACGTCTGCTTCGTCAGCAATTCTTGATGATTCCCTTAGTGGTTCGCCGCGTTCTCGTCTAGTGCGCGAACAACAATCTACAATATCGAATGCGGCGACAGCAGGTTCATCATGGTATCAGTTACAGCAGTCGACCGACTTTAATCCAGCACTCGCAGTAGACTGCACCGCTGCCATTGATGGGGTAGCGGAAGTTGATGGCAGCAAATATCTTGATTTGGATACTTGCAAACGGGAAAATATTAGTGGTAGCAATTCACATGCAACATCAAATTTGTTgccaccatcatcagcatcatcgtcGGCATCTTTTATTGCTGCTGGAACCGAAAGTAGTTTGGCTGGCGGTTGCACTGCAGATGCCCTCAATATACGCACCGACGAAAAGATGCCAGCAAAGGGAGAAATTTCAGAGCAGGAAAGCAATTGCGACATTGAGAATTCATGGAGTCAATCGATGTATTGCGATATGTCATCACGATTATTTAGGACAACATTTCCTGGGGCTTATGGTCAAGATAATGGTTGGCATCATGATCAATATTATCCGGCTCAGGATTTAACCATGGCAAACGGTGCAAATGATCAGAAACCAGCAAAGAGCTTTGACTTTCGTCTTCCGATGGATGGAACTACCTCAACCACAGTGACGCATGCAACTAGTTCTCAGAATATGCAGATATTTCCACAAAACAACGATAGCATTCCATCAACATCGAAGGCTTCGAAAAATAAACGGAAACGTGTTACACAAACGCCCACATCGACAATTACGTCACAACAAATGATGCTGCAACAGCATcagctgcaacaacaacaacaaccactacagcagcatcagcatcaaccaAACCCCTTGGAGTTGCATGATTCTTTGCCCACCACATCGGCCGCTTTGTTGGCTGGTCCACCAAATGAGTTAGCAGCTGTTTTAGCCGCTGGCGGCCCAATCAACAGCATGTTAACTTCTCCGCGAAGACAGCGTAAAGTTTATAAATGTGACCATTGTCACATTGTGTTCCGCAAGCTTAAAGATCGTACAGCCCATTTGGTTGAACAGCATAATTATATACGTAGAAATCGACGACTTGTCTGCGTACAGAGTGTGGTAACATCAACGATAACAAGTATTGAAATGagtgctgctgccgctgccaTAGTTGCTTCATCCAGTGGACATATGTTACCAACTttacctccaccaccaccacaaacAATGCTGTTGCCtccgccgccaccaccaccaccagcaccagcaccccTCTTACAAGGAAATGCAGATGATGCGGAGGATATAAAGCATCAGattgttaaaatcaaaatggaGCATTGcagtgaacaacaacaacaacagcagcaacaacaacaacaacagcaaatcaATAATGTTATTAACGATGAAGAactacagcagcagcaacaacaacaacaacaacagcagcagcagcaatcaTTAACAGCATTGACAATCATCAGTGAAAATAAAGTAGAAGCCAAAACGGAATATGCCGATGTAAAAGATTCATCATTAAcagaagaagcagcagcagcaagcacCTCTGGCAGTGGTGCAATTGTTCCACATGAACATGTCGTTGCCGAATTGGATACGAAACCAAATGTTGAGACTCCATTCTATGGCAAACATATTCCAGTATCAAAATTATCCTCACTCTATCGCATGTTGACAGGCTACAATATATCAAAGCTTAAGCAAGGACGCCCACTCAGTGAATTGGAACAAAAAGTTATGGAGAACTCAATACTTTTATGCTATGTTTGTCGAACAGACTTCCCATCGGTCAAATTATATGATGCTCATTTGACAGAGCATCCGGCTGAGTGTTTTACATGTGGCAAGAAGTTCTATCGTTGGAAAAACTTCTCATTGCATTTGAAACGTCATCTGGGTTGGAAGGAGTTCGGCTGTTATGTATGCGAAAAGAAATTCGTGGTACGCAGTGCTTTGGTTGAGCACATGCGCATGCATACTGGACAGACACCACTGAAATGCGGAGTTTGTGGCAAACGATTTAAACGCTACTCAAATCTGACACAACATCGCAAACGTCATACCAGGCAAATCGTACGTAAGAAGGAATACGTTTGCCATTGCGGTGAAGTGCTACCCTCGAAGGCTCGTTATCTATGGCACAAGGAAACACATGACTCGAAACCGAAATGTTGTCCCTATTGTTGTGATCGCTTCATACACGCCAATTCGTTGCGCCGTCATATACGCCTCGCACACTCGGATAAATTCGATTATACTGAGCCCATGGAATGCCCCATGTGCAAGCAGGTGTTTGCTAAGACCTCTATAAAGGCACATATGGCCACCCATTCAATGGGTACACAATATGATTGTGTTATTTGTAACAAGTCTTTCTCAACCAAATGGAATCTTAAGATGCACTCCTGGGTTCATGCTAATCGCACATCGAAACCATTCAAATGTGAACATTGTCCAAAAGCATTTGTACGCGAATTGGATTTCAAGAATCATATGAACTCACATAAACAGATCAAACCCTATACCTGTGAGTATTGCGGTTGTAAGTTCATACGCAAGTACAATTATATGCGCCATCGACGTGAACATCATGGCAACAAGAAGTTTACTTGCGATCTGTGCGATAAATCATTTCATCGGCACTACTATCTGATTGAACATCGACGCATCCATACCGGCGAGCGTCCATTCCAGTGCACAATATGCGGCAAAAGTTCCACGACAAAGACGAATCACAACAAACATCTCAAAATCCACCACTCACGTGATCCTTTCACTGTGGaggtataa
- Protein Sequence
- MVANVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTISGGAGGAAALASALTNNSSSDIKKNEGDGEDEEEEGEGEGGEGETAASTDVKPIIVEDYISKSIAETKTTATITPTVTATEGTAATATTSKSYHDELSSLTSSSMKTMKATSSANTATGGSAAETIGAASTISSFSNATTADSLHNPPFKHKRIESAPSATALPLKSIAVEPTDQSNQQHIRSRTNAAYQAFYNGSNATNQLYEQPQFSMQQQHVTATGISQLQTQATVNVQRNLVDTSASLLPPPSMSNIQLRNNYKGTLPQATPYQHHQHNTRHQIHHHQQQQQQQQTNLNLVYSPALPPPPPLQLFTQQSPQHQKPPPAYGTAISQIRSQHNQNRQQNQQQQQHQQHLQQQQQQISLHQISPSMQSSVGSATTTTSKQHMPQMKNKYDGDAVPFISLLPPSSSQQQHLNTQFPQAGHHSASLPTHVLPNVGMTIAPSLLSQKGIPLASTPSALTRQTTSPISNNVIGMAAAPSPSPSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKDNGEFSVIERIYHSPPSVLHIHDDEDDDGDDEEEEFQDIVAANSSKSMPTKYSTKKRQTKSLKKNSGVGHNKKSSHKKSHSNEDEFMSLSSGTESNTEDEEMGALSSISTKASLYQPKNTNHQQQNQQNQQATLPLSTAPSTSAAAAAAASNESSTSSNNNGQQPPRKSKKNTITVLSDVPLNMNEYLDLVGNILASNKFTNQRPFAAMAPVPIVKVEKEEPVDEFDARQHNFVKDEEEALENISTKEEPATTKSMLLQNTIPPVIPKANETETDDFVENSDNKQNFDDQKPPTIDVETPQQQSIQEASPCNSGSGSSSSNSSSSIHVTTSVIRMATTTATSQQQQQQAHQEADTEAQSQCDPLEIKHSVPEDLTQPLMKIEVEPTRLTPQTFPPPPLKQRGPKKLIIKPKSKPKTTQKTDDDNVASTSHTAASISHSAASKSNAAAASTIPTTADDIVYVKNEPITNAYDGPSASNSILENHLKSSPSSSTLKVESGQNNNNNNNKNHNNDMSSELEVINTNAEDARVLLEFANSKQHIVPHHVSTLSPAMLTVNTSSGSIQIPTNNSLTNFPSAGSVFSTNNTITSISHPNAGNATKRVKCEEYILPDNDLDEIVISSSSYSSHSASDVVAAAQQHQQQQSQPMPVEVIAAHSAHNFNDFNFLYNPASVTPYVMGGNTKVTSNFTPFAYQQQHHAHDATTAATMASSTSASSAILDDSLSGSPRSRLVREQQSTISNAATAGSSWYQLQQSTDFNPALAVDCTAAIDGVAEVDGSKYLDLDTCKRENISGSNSHATSNLLPPSSASSSASFIAAGTESSLAGGCTADALNIRTDEKMPAKGEISEQESNCDIENSWSQSMYCDMSSRLFRTTFPGAYGQDNGWHHDQYYPAQDLTMANGANDQKPAKSFDFRLPMDGTTSTTVTHATSSQNMQIFPQNNDSIPSTSKASKNKRKRVTQTPTSTITSQQMMLQQHQLQQQQQPLQQHQHQPNPLELHDSLPTTSAALLAGPPNELAAVLAAGGPINSMLTSPRRQRKVYKCDHCHIVFRKLKDRTAHLVEQHNYIRRNRRLVCVQSVVTSTITSIEMSAAAAAIVASSSGHMLPTLPPPPPQTMLLPPPPPPPPAPAPLLQGNADDAEDIKHQIVKIKMEHCSEQQQQQQQQQQQQQINNVINDEELQQQQQQQQQQQQQQSLTALTIISENKVEAKTEYADVKDSSLTEEAAAASTSGSGAIVPHEHVVAELDTKPNVETPFYGKHIPVSKLSSLYRMLTGYNISKLKQGRPLSELEQKVMENSILLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCEKKFVVRSALVEHMRMHTGQTPLKCGVCGKRFKRYSNLTQHRKRHTRQIVRKKEYVCHCGEVLPSKARYLWHKETHDSKPKCCPYCCDRFIHANSLRRHIRLAHSDKFDYTEPMECPMCKQVFAKTSIKAHMATHSMGTQYDCVICNKSFSTKWNLKMHSWVHANRTSKPFKCEHCPKAFVRELDFKNHMNSHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDLCDKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00063049;
- 90% Identity
- -
- 80% Identity
- -