Amin002813.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amiota minor
Gene Symbol
ftz-f1
Assembly
GCA_037043295.1
Location
JBAMAW010000273.1:1037446-1062297[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3 2.8e+04 -14.4 24.5 27 154 8 160 4 183 0.40
2 3 1.9e-19 1.8e-15 57.9 0.8 1 76 347 423 347 456 0.65
3 3 9.4e-72 8.8e-68 230.2 0.8 158 408 527 770 505 772 0.92

Sequence Information

Coding Sequence
atgttattagaAATGGAGCAACAACAGGGGACAGTCTCGTTTATATCTTCATTGAATATGTCCccattttcattacaaatggaacaacagcaacaacaaccagcaAGTCCAGCATTAGCAACTAATCAAAATCCAAGTGGAAATTctaatacaaacaataataataataataataacaacaacaacaacaatagtaataatgataatgattcaAATGCTTTGAGTAATTCTGATAATGATTATGGATCTTATACACTACAATTAGCAACAGGCAATAGTAGTAACAGtgctgctggtggtggtggcggcggaAGCGGTGGAAGTGGTTCGAATAATAATcaccatcaacagcatcatcaacatactcatcatcatcaacagcagcagcaacaacaacaacattatcagcaacaacagcaacaacaaaatattgccaataattcaaatttctCGTACTCGTACATTTATAATTTCGACTCACAGTACATATTTCCAACAGGCTATCAGGATACCACCTCATCACATTCACAGCAAAGTGGTGGCACTGGTGGCGGAGGAggcggcggcggtggtggtagtggtagcGGCATGAATAATACCTCCTCCTCTTCATTGCTTAATGGCGGCAATGCTGGGGGTGGTGGTGGCAATTCTGGCGGTTATATGTCATTATTACCACCTGGTAGTGGTGGTAATGGCACCAGTGTTCATCTTGGCGGCAATGGTGGCGGCCCTGGTGGCATTGGCCCTGGCGGCAATAGTGGCGGCACCAGTGCCTCAGCGGGTCATTCCGGTGAAGCAATCGATTTCAAACATCTCTTCGAAGAGCTGTGCCCCGTTTGTGGTGACAAAGTCAGTGGCTATCATTACGGTCTGCTGACATGTGAATCCTGCAAGGGTTTCTTCAAGCGTacagtacaaaataaaaaggtttACACATGTGTCGCTGAGCGTTCGTGTCACATCGATAAAACGCAACGTAAGCGTTGTCCCTACTGTAGATTTCAGAAATGTCTGGAAGTTGGCATGAAATTGGAAGctGTAAGAGCGGATCGAATGCGTGGTGGGCGGAATAAATTTGGACCTATGTACAAACGTGATCGGGCGCGAAAACTGCAAGTGATGCGACAACGACAATTGGCTCTGCAAGCGTTACGTACCTCAATGGGTACGACGGACATGAAACCGACACCATTATCACCGGGCTATCAACAAGCATATCcaaatatgaatattaaacaagaaattcaAATACCTCAGGTATCCTCACTCACACAATCGCCAGATTCATCGCCTAGCCCCATAGCTATAGCGTTGGGTCAAGTAAATGCCAATTCTGGTGTTTTGACGACGCCTATGAATGGCAATAATGGTTCGGCTGGTGGAACTGGTAGTGGCGGAGGTAATGGTGGCGGTGGAGGAGGCGGCGGCGGTGGTAATGGCAATGgaggcaacagcaacaatagtGACATCATAAATCGAGGCAGTGGCGGTAATAGTTGCCACGAAGCCGGCACTGGATCTCTACAAAACACAGGCGAATCGAAATTgtgTTTCGATTCTGGAACGCATCCATCAAGCACCGCCGATTCACTTATTGAGCCACTGAGGGTATCACCTATGATCCGGGACTTTGTGCAGTCTATCGATGATAGAGAATGGCAAACCCAATTGTTTGCGTTACTTCAAAAGCAAACTTACAATCAGGTTGAGGTGGATCTCTTTGAATTAATGTGTAAAGTACTTGATCAGAATTTGTTCTCACAAGTGGATTGGGCAAGGAACACGGTCTTTTTCAAGGATTTAAAGgttgatgatcaaatgaaattattacaaCATTCATGGTCTGATATGCTTGTCTTGGATCATTTGCATCATCGATTACATAATGGTTTGCCCGATGAAACGCAACTGAATAATGGACAAGTGTTTGATCTTTTAAGTCTTGGACTATTGGGTGTCCCGCAATTGGGTGATTACTTTAAtgaattgcaaaataaattacaagatCTGAAATTTGATATGGGCGACTATGTGTGTATGAAATTCCTAATATTATTAAATCCAGATGTGCGTggcattataaataaaaagacgGTTTTGGAAGGTCATGAAAATGTGCAGGCAGCACTTTTGGATTATACACTCACTTGTTATCCATCAGTGACGGATAAATTTCGACGTCTTTTGAATATTCTGCCTGATATTCATGCGATGGCATCCCGTGGTGAGGAGCATCTTTATTCCAAACATTGCGCCGGAAGTGCGCCCACTCAAACGTTACTCATGGAAATGTTGCATGCCAAAAGAAAAGTGTAA
Protein Sequence
MLLEMEQQQGTVSFISSLNMSPFSLQMEQQQQQPASPALATNQNPSGNSNTNNNNNNNNNNNNNSNNDNDSNALSNSDNDYGSYTLQLATGNSSNSAAGGGGGGSGGSGSNNNHHQQHHQHTHHHQQQQQQQQHYQQQQQQQNIANNSNFSYSYIYNFDSQYIFPTGYQDTTSSHSQQSGGTGGGGGGGGGGSGSGMNNTSSSSLLNGGNAGGGGGNSGGYMSLLPPGSGGNGTSVHLGGNGGGPGGIGPGGNSGGTSASAGHSGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRTSMGTTDMKPTPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNANSGVLTTPMNGNNGSAGGTGSGGGNGGGGGGGGGGNGNGGNSNNSDIINRGSGGNSCHEAGTGSLQNTGESKLCFDSGTHPSSTADSLIEPLRVSPMIRDFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRLHNGLPDETQLNNGQVFDLLSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPDVRGIINKKTVLEGHENVQAALLDYTLTCYPSVTDKFRRLLNILPDIHAMASRGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01363997;
90% Identity
iTF_00062853;
80% Identity
iTF_00062853;