Amin020542.1
Basic Information
- Insect
- Amiota minor
- Gene Symbol
- lrrfip2
- Assembly
- GCA_037043295.1
- Location
- JBAMAW010002189.1:66239-80126[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.7e-59 1.9e-54 185.6 15.5 1 142 1682 1834 1682 1837 0.85 2 3 5.1e-43 1.4e-38 133.5 5.3 166 299 1837 1959 1834 1960 0.91 3 3 0.33 9.3e+03 -3.8 4.2 216 245 1985 2013 1964 2033 0.50
Sequence Information
- Coding Sequence
- ATGCCCCCAAAACGTGGAAAGGgtaaagcaacagcaacgcCGGCAGCAGCTgctaaagagaaaaaacaaaaaaagtcaACAAGTGTGAAAGCTAAGGAAGcagtggcggtggtggtggaagataatataaatataaacaaagttgtgaaaacaaaagttaCAAATGAATCTTCTACAACTCCTCCACTTCCACTAGAAACAGTCTCGGTCCCACTGCCATCAACACCAGCCCCGCAAACAACATCAATTTCAAACAGCAGCGATGAAGTCATCGAAGAATTTGATTTCAGTGATAGCGACCTACGTGCCttaagtgatgatgatgatgataataatgaagttAACTCAAATAAAGTTGATGACAAAAgcgaaaatatagaaaaagaaaatgatgcaCTCGCAAAGAATATTGAAAtcgcaaataacaaaaacaactgtgacaattacaacaacaattcatcAATTGATAACAATGATAAAGAGTCAATAAAAGataaagcaacaacaccaaaacaagataataaaaataataataaagttgaCGACTCAAGTAATGTTGccgttggtgatgatgatgatgatcaactTAAGCAACTACTAACACCATTTCGTCCAATTACACCAGGACGCATAGTGGATACCGGTGATGGTGATTTTATAGAGCAAAAGATAAATATGTCAACTGCTCaaaatgatgttgttgatccaaaagacaaaaaaactGTGGCTGCAGGCAATTTGATTGTGTCGCctgctgatgatgatcaacTTAAGCAATTGCTAACACCATTTCGTCCAATTGCACCAGGACGCATAGTGGATACCGGTGATGGTGATTTTATAGAGCAAAAGATAAATATGTCAACTGCTCAAAATGATGATCTTgatacaaaagaagaaaaaaatatgccTTCAGCAAATTTGATTGTGTCGCctgctgatgatgatcaacTTAAGCAATTGCTAACACCATTTCGTCCAATCACACCAGGACGCATAGTGGATACTGGTGATGGTGATTTTATAGAGCAAAAGATGAATATGTCAACTGctcaaaatgatgatgttgatccaaaagacaaaaaaactGTGCCTTCAGGCAATTTTATTGTGTCGCCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTCGTCCAATTACACCAGGACGCATAGTGGATACCGGTGATGGTGATTTTATAGAGCAAAAGATAAATATGTCAACTGCTCAAAATGAGGATGTTGATCCAAGAGACAAAAAAACTGTGCCTTCAGGCAATTTTATTGTGTCGCCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTCGTCCAATTACACCAGGACGCATAGTGGATAccggtgatggtgatgttatAGAGCAAAAGATAAATATGTCAACTGctcaaaatgatgatgttgatccaaaagacaaaaaaactGTGCCTTCAGGCAATTTGATTGTGTCGCctgctgatgatgatcaacTTAAGCAACTACTAACACCATTTCGTCCAATCACACCAGGACGCATAGTGGATACCGGTGATGGTGATTTTATAGAGCAAAAGATAAATATGTCAACTGctcaaaatgatgatgttgatccaaaagacaaaaaaactGTGCCTTCAGGCAATTTGATTGTGTCGTCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTAGTCCAATCACACCAGGACGCATAGTGGATACTGGTGATGGTGATTTTATAGAGCAAAAGATGAATATGTCAACTGctcaaaatgatgatgttgatccaaaagacaaaaaaactGTGCCTTCAGGCAATTTGATTGTGTCGTCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTAGTCCAATCACACCAGGACGCATAGTGGATAccggtgatggtgatgttatAGAGCAAAAGATGAATATGTCAACTGCTCAAAATGATGATCTTaatagaaaagagaaaaaaaatatgcctTCAGCTAATTTGATTGTGTCGCCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTAGTCCAATCACACCAGGACGCATAGTGGATACTGGTGATGGTGATTTTATAGAGCAAAAGATGAATATGTCAACTGctcaaaatgatgatgttgatccaaaagacaaaaaaactGTGCCTTCAGGCAATTTGATTGTGTCGTCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTCGTCCAATCACACCAGGACGCATAGTGGATAccggtgatggtgatgttatAGAGCAAAAGATGAATATGTCAACTGCACAAAATGATGATCTTgatagaaaagagaaaaaaaatatgcctTCAGCTAATTTGATTGTGTCGCCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTCGTCCAATCACACCAGGACGCATAGTGGATACCGGTGATGGTGATTTTATAGAGCAAAAGATAAATATGTCAACTGctcaaaatgatgatgttgatccaaaagacaaaaaaactGTGCCTTCAGGCAATTTTATTGTGTCGCCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTCGTCCAATCACACCAGGACGCATAGTGGATAccggtgatggtgatgttatAGAGCAAAAGATGAATATGTCAACTGCTCAAAATGATGATCTTgatagaaaagagaaaaaaaatatgcctTCAGCTAATTTGATTGTGTCGCCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTAGTCCAATCACACCAGGACGCATAGTGGATAccggtgatggtgatgttatAGAGCAAAAGATGAATATGTCAACTGCTCAAAATGATGATCTTGAtagcaaagagaaaaaaaatatgcctTCAGCCAATTTGATTGTGTCGCCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTAGTCCAATCACACCAGGACGCATAGTGGATACTGGTGATGGTGATTTTATAGAGCAAAAGATGAATATGTCAACTGctcaaaatgatgatgttgatccaaaagacaaaaaaactGTGCCTTCAGGCAATTTGATTGTGTCGCctgctgatgatgatcaacTTAAGCAACTACTAACACCATTTAGTCCAATCACACCAGGACGCATAGTGGATAccggtgatggtgatgttatAGAGCAAAAGATGAATATGTCAACTGCTCAAAATGATGATCTTaatagaaaagagaaaaaaaatatgcctTCAGCTAATTTGATTGTGTCGCCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTAGTCCAATCACACCAGGACGCATAGTGGATACTGGTGATGGTGATTTTATAGAGCAAAAGATAAATATGTCAACTGctcaaaatgatgatgttgatccaaaagacaaaaaaaccgTGCCTGCAGCCAATTTGATTGTGTCGCctgctgatgatgatcaacTTAAGCAACTACTAACACCATTTCGTCCAATCACACCAGGACGCATAGTGGATAccggtgatggtgatgttatAGAGCAAAAGATGAATATGTCAACTGCTCAAAATGATGATCTTgatagaaaagagaaaaaaaatatgcctTCAGCTAATTTGATTGTGTCGCCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTAGTCCAATCACACCAGGACGCATAGTGGATACCGGTGATGGTGATTTTATAGAGCAAAAGATGAATATGTCAACTGctcaaaatgatgatgttgatccaaaagacaaaaaaactGTGCCTTCAGGCAATTTGATTGTGTCGTCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTAGTCCAATCACACCAGGACGCATAGTGGATACTGGTGATGGTGATTTTATAGAGCAAAAGATGAATATGTCAACTGctcaaaatgatgatgttgatccaaaagacaaaaaaactGTGCCTTCAGGCAATTTGATTGTGTCGCctgctgatgatgatcaacTTAAGCAACTACTAACACCATTTAGTCCAATCACACCAGGACGCATAGTGGATAccggtgatggtgatgttatAGAGCAAAAGATGAATATGTCAACTGCTCAAAATGATGATCTTgatagaaaagagaaaaaaaatatgcctTCAGCTAATTTGATTGTGTCGCCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTAGTCCAATCACACCAGGACGCATAGTGGATACTGGTGATGGTGATTTTATAGAGCAAAAGATGAATATGTCAACTGctcaaaatgatgatgttgatccaaaagacaaaaaaactGTGCCTTCAGGCAATTTGATTGTGTCGTCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTCGTCCAATCACACCAGGACGCATAGTGGATAccggtgatggtgatgttatAGAGCAAAAGATGAATATGTCAACTGCTCAAAATGATGATCTTgatagaaaagagaaaaaaaatatgctttcAGCTAATTTGATTGTGTCGCCTGCCGATGATGATCAACTTAAGCAACTACTAACACCATTTAGTCCAATCACACCAGGACGCATAGTGGATAccggtgatggtgatgttatAGAGCAAAAGATGAATATGTCAACTGCTCAAAATGATGATCTTgatagaaaagagaaaaaaaatatgcctTCAGCCAATTTGATTGTGTCGCctgctgatgatgatcaacTCAAGCAATTGCTAACACCATTTAGTCCAATCACACCCGGTCGCATTGTGGATACCGGTGATAATAATGAGGATCATCTTGTTCATAATAAACAACTGGagaatataaataagaatGACAGTAATGGTGCCGGTACTTCAACTGATTTAAAACGAAACcaaaatgataatattgaagatggtgctgatgatgatagtgaGAGTGAGGATGACAATTTTACGCGATATCTTGGTTTAGTAAATCACGTTgCCGAAGCCAGACTAGCGGCACGCCGACAAGCACGAGCTGAAGCGCGGGAAATACGCATGCGTGAATTGGAGCGTCAACAAAAGGAACAAGAACAAAACGCAGATCGTGTATTTGATATGCATGCATCTGTTGGTACTACCAATGATCCTTTGACTCGTACGGCACGTCTGGGAGCTGGTGTACCAGCTGTTAGTGGCCTGTTGAATGCAACCCGCGTTGTTAATGCCAGTTCAATGTCATCACGAAGGAGTAGTGAAGATTCACTTGAAGAGGAGGGCAGAAGTCTAAGGGATATAAAACATGAATTAAAGgaTGTTGAAGATCGATTTCGCAAAGCGATGATTGCAAATGCCCAATTGGATAATGACCGCGCCGCACAAACATATGAAGTGAAACTGCTCAAagacaaaattgaaacaatgcAAGAATCATATGCGCAATTGGAACGTGAATTCAAAGGGAATCACGGTCAGCTTAATGAACGTGACACACTCATTGCAGAACAGGGTTTAGTGATCGTTGCCATCGAGAATAGCGATCACTCAGATGCCAAGCGTGCTCTAGTCAGCGTAGAAAACGCGAATGTTTTGGCCTCAGTGCAGGGTTCATTAGATGTACGactcaaaaaatttaatgaggAAAAACAGCAACTCGTCGGCGAGGTACAAAAATTGCAAGAGCAATTGGATGCCTACAAAAGCGAGGGCAAAGGTCGCGGCAATTTATTAAATGGTCCATTAGGgtctgatgatgattatgaggCTCAAAgagaagcaaacaaaatcatatcagactataaatataaattgcaaaaagcTGAACAAGAAATCGCTAGTCTTCAGGCGAGTTTAGCACGTTCAGAAACGCAAGTCATACGATATAAAAGTACAGCGGAAGCAGCAGAGAAAGCTGAAGCTGAACTTAAAGTTGAACGAAGGAAACTTCAACGTGAGAATCGAGAAGCAATGGAACGTCTGGAGGAGCTGGAAACATCaaataatcatttattaaaacGTTTGGATAAATTGAAGAATGCAAAAAGTGCATTACTTAAAGATCTTTGA
- Protein Sequence
- MPPKRGKGKATATPAAAAKEKKQKKSTSVKAKEAVAVVVEDNININKVVKTKVTNESSTTPPLPLETVSVPLPSTPAPQTTSISNSSDEVIEEFDFSDSDLRALSDDDDDNNEVNSNKVDDKSENIEKENDALAKNIEIANNKNNCDNYNNNSSIDNNDKESIKDKATTPKQDNKNNNKVDDSSNVAVGDDDDDQLKQLLTPFRPITPGRIVDTGDGDFIEQKINMSTAQNDVVDPKDKKTVAAGNLIVSPADDDQLKQLLTPFRPIAPGRIVDTGDGDFIEQKINMSTAQNDDLDTKEEKNMPSANLIVSPADDDQLKQLLTPFRPITPGRIVDTGDGDFIEQKMNMSTAQNDDVDPKDKKTVPSGNFIVSPADDDQLKQLLTPFRPITPGRIVDTGDGDFIEQKINMSTAQNEDVDPRDKKTVPSGNFIVSPADDDQLKQLLTPFRPITPGRIVDTGDGDVIEQKINMSTAQNDDVDPKDKKTVPSGNLIVSPADDDQLKQLLTPFRPITPGRIVDTGDGDFIEQKINMSTAQNDDVDPKDKKTVPSGNLIVSSADDDQLKQLLTPFSPITPGRIVDTGDGDFIEQKMNMSTAQNDDVDPKDKKTVPSGNLIVSSADDDQLKQLLTPFSPITPGRIVDTGDGDVIEQKMNMSTAQNDDLNRKEKKNMPSANLIVSPADDDQLKQLLTPFSPITPGRIVDTGDGDFIEQKMNMSTAQNDDVDPKDKKTVPSGNLIVSSADDDQLKQLLTPFRPITPGRIVDTGDGDVIEQKMNMSTAQNDDLDRKEKKNMPSANLIVSPADDDQLKQLLTPFRPITPGRIVDTGDGDFIEQKINMSTAQNDDVDPKDKKTVPSGNFIVSPADDDQLKQLLTPFRPITPGRIVDTGDGDVIEQKMNMSTAQNDDLDRKEKKNMPSANLIVSPADDDQLKQLLTPFSPITPGRIVDTGDGDVIEQKMNMSTAQNDDLDSKEKKNMPSANLIVSPADDDQLKQLLTPFSPITPGRIVDTGDGDFIEQKMNMSTAQNDDVDPKDKKTVPSGNLIVSPADDDQLKQLLTPFSPITPGRIVDTGDGDVIEQKMNMSTAQNDDLNRKEKKNMPSANLIVSPADDDQLKQLLTPFSPITPGRIVDTGDGDFIEQKINMSTAQNDDVDPKDKKTVPAANLIVSPADDDQLKQLLTPFRPITPGRIVDTGDGDVIEQKMNMSTAQNDDLDRKEKKNMPSANLIVSPADDDQLKQLLTPFSPITPGRIVDTGDGDFIEQKMNMSTAQNDDVDPKDKKTVPSGNLIVSSADDDQLKQLLTPFSPITPGRIVDTGDGDFIEQKMNMSTAQNDDVDPKDKKTVPSGNLIVSPADDDQLKQLLTPFSPITPGRIVDTGDGDVIEQKMNMSTAQNDDLDRKEKKNMPSANLIVSPADDDQLKQLLTPFSPITPGRIVDTGDGDFIEQKMNMSTAQNDDVDPKDKKTVPSGNLIVSSADDDQLKQLLTPFRPITPGRIVDTGDGDVIEQKMNMSTAQNDDLDRKEKKNMLSANLIVSPADDDQLKQLLTPFSPITPGRIVDTGDGDVIEQKMNMSTAQNDDLDRKEKKNMPSANLIVSPADDDQLKQLLTPFSPITPGRIVDTGDNNEDHLVHNKQLENINKNDSNGAGTSTDLKRNQNDNIEDGADDDSESEDDNFTRYLGLVNHVAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHASVGTTNDPLTRTARLGAGVPAVSGLLNATRVVNASSMSSRRSSEDSLEEEGRSLRDIKHELKDVEDRFRKAMIANAQLDNDRAAQTYEVKLLKDKIETMQESYAQLEREFKGNHGQLNERDTLIAEQGLVIVAIENSDHSDAKRALVSVENANVLASVQGSLDVRLKKFNEEKQQLVGEVQKLQEQLDAYKSEGKGRGNLLNGPLGSDDDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKVERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -