Amin007727.1
Basic Information
- Insect
- Amiota minor
- Gene Symbol
- bab1
- Assembly
- GCA_037043295.1
- Location
- JBAMAW010001038.1:1101092-1103433[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-09 3e-06 27.5 0.0 2 42 424 464 423 467 0.87 2 2 1.7 4.9e+03 -2.0 0.3 4 20 585 600 585 603 0.88
Sequence Information
- Coding Sequence
- ATGGGTGGACCACCGCCAGTGCCTACCGTGCCTGCTACCGAAGGTCAAACATATTGCCTACGGTGGAATAATCATCAAACGAATCTAGTACAGATATTGCACGCGCTCCATGAAGTGGGAAGTTATGTGGACTGTACCTTGGTAGTGGACGATGATCATTTTAAGGCACATCGTGTGGTTTTGGCCGCCAATTCACCATATTTCCAGACAATATTGCAAGATGTCCCACTGGATCATTGTAGTATCATATTGCCAGGCGTCAAAGGATTTGAGATTGCCGCCCTTCTGCAATACATGTATACTGGGGAGACTACGGTAACAAAGAGTCAAGAGCCAGAGATTTTGCGTACCGCAAAAGAGTTGCAAGTGAAAGGACTCTATGACAATCTTATGAAATTCAATCAAAGGGACGAACATCCTGAACGTGTGTCATTGAGTCATCATTATGCCAGTTCGACAGCACCGCACACGCCTTATTTGCCGACTTCATCGTCGTTATCAACAGCCATGGGTGCTAAGAATGGTGGCCTACACAATGGTGGTATGGATCCTTATGGCGTTGCTGCCGCAGGCGTTCACCACAATTCCTCATCGGTGATCTCAACCTCGACAAACATTTCACCATCTGCTGCGATCTCGAGTAGTTCTTCGCCACCATACAGTGGTGCTGGTGCTAGTGCCAGTGCTTATCAACAACCGCTTTATGCCTCTAGCATGTATCGTAAATCACCAGGTCCTGCTACTGTTTCTGCtgttgccgctgctgctgccgctgctgttgCTGAACAGTCCACTCATCCAGTCACCGGTGGAAGTGGGAATGCTGGTGTCGTCGCTGCTGCCAGTGAACGTGGACAGTGGCCATTGACGACATCTGCTGCTACTGCCGCTGCTGCCGCCATGCTTAATTCAGTCTATGAATCAGCTGCGGATATGAATCCTCTTAAACGTAAGAAGCTCTCTGCCATTTCGAGTATGTTTATGAATCGTGATACTCCCATATTGCGAAATGTGTTGGCAAATCCAGCTGATTCCTCGCAACCAAGTCCGTTGATGCTGCCTGGAGTCTACAAAGCTGACAAACAGACTGAAAAACAATCAACACAGAGTACTGGAAGCAATAACAACCATAGTTTCAATGGCTCCGATTATGGTAGCGATAAGTATCAGGATGAACCACTTTCGCCACATACCGATCGCTCCTTTGACGATGATGCTGGAAACAATGCTGGTAAGAAACCTGAATGGAAGCGCTATAAGCAGTATACACGTAATGATATGATGTGTGCCATCCAATGCGTCCGTGAGGGCATGTCTGCTCTTCAAGCTTCTCGCAAATTTGGTCTGCCATCGCGTACACTCTACGACAAGGTGCGTAAACTCAATATAAATACAGGTCGTGGCACTGGACGCACACCCAAACGTAGTCCCCCAAGTGTTGAAGCATCTGCTGCGTTCCCATATTCGTCACATCACGGTTATGGTCAGGTGGAGTCTTACTCTACCGGTGGCGGTGCTGCTGCCAGTGGTGGCGTTGGTATGCAGGATGAGCGGGAACCCAAAGAGCAGACaagtcatcatcaccaccagcaacagcaacagcaacaacaccaccaTCGTGCCGAGGCTACACATCACATGCCACCAACTATACCACATTCAGCAGCCGCACTCTTGGATCACGCATTCCTACAGCAAGCACTTGAAAATCGAAACAGTGATATTGCTGGTCGAGAGGCTTTGCATGCCATGGCCTTGGCAGCTGCTGCCCACGCAGCAGCCAATCGCATGAGCACAAGTCCCGGTTCCAATGATCACGGCGCACGTTCACCAAGCCCAGCACCACCAGTGCGTTACTCTAGCACCAGTGCGGACTTACTTGAGAAGTCGCAACCACCACAGTCACGTCACGTACAATCAGAGGAAGTAGTGCACATGATCAAACGCGAGGCAATCGATCGTGAAGAACGAGACgctgatgatgaagacgatCAAGTGGAAGATCTATCTGTGGCACGCAAGAAACGCAGTTCAAGCAGACGTCCCGATTCGCCATATACAGTCCATCAACGTATGAAGTCACCCACTCCAATGGACACAAACGAAACCACTACTAGTGTGATTATACCAACCATACCATCAACTCAGTTGAGCAAACAACTGggtgcatcatcatcatccattaATGGCGGTGATGGCGATAATGATGGGTATGATACTGTTGCCACCAAGCGCGAACATGATGTTCATAATGAAGATGGTCGTAGCTCCGACTGA
- Protein Sequence
- MGGPPPVPTVPATEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDDHFKAHRVVLAANSPYFQTILQDVPLDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNQRDEHPERVSLSHHYASSTAPHTPYLPTSSSLSTAMGAKNGGLHNGGMDPYGVAAAGVHHNSSSVISTSTNISPSAAISSSSSPPYSGAGASASAYQQPLYASSMYRKSPGPATVSAVAAAAAAAVAEQSTHPVTGGSGNAGVVAAASERGQWPLTTSAATAAAAAMLNSVYESAADMNPLKRKKLSAISSMFMNRDTPILRNVLANPADSSQPSPLMLPGVYKADKQTEKQSTQSTGSNNNHSFNGSDYGSDKYQDEPLSPHTDRSFDDDAGNNAGKKPEWKRYKQYTRNDMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNINTGRGTGRTPKRSPPSVEASAAFPYSSHHGYGQVESYSTGGGAAASGGVGMQDEREPKEQTSHHHHQQQQQQQHHHRAEATHHMPPTIPHSAAALLDHAFLQQALENRNSDIAGREALHAMALAAAAHAAANRMSTSPGSNDHGARSPSPAPPVRYSSTSADLLEKSQPPQSRHVQSEEVVHMIKREAIDREERDADDEDDQVEDLSVARKKRSSSRRPDSPYTVHQRMKSPTPMDTNETTTSVIIPTIPSTQLSKQLGASSSSINGGDGDNDGYDTVATKREHDVHNEDGRSSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00061040;
- 90% Identity
- iTF_00061040;
- 80% Identity
- iTF_00062885;