Amin007663.1
Basic Information
- Insect
- Amiota minor
- Gene Symbol
- lov
- Assembly
- GCA_037043295.1
- Location
- JBAMAW010001038.1:409309-426771[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-18 2.4e-14 53.4 0.0 2 44 933 975 932 976 0.94
Sequence Information
- Coding Sequence
- ATGTTGAAGGACATCGAGGAGCTCATCCAAAGTCGCCAACTGACTACGTTTGCTTTGCATATGACTGAATATAGTCGTGAGCCAGCGCCAGTGCCACTTTTGGCAAAAACACCGGCATCATCTCATAGCCACAGTAACgaagcaatgatgatgatgtcgacaCCAATAACACCAATGAAAACAGCAACCACAAACAATAGGCTAAGTGCAAATGCCCCAACATCGCCTTTGCCTCAAATGCCGCCCACAACGCCACCATTAAATATGACAGGACATAGAAGAGGTGTCACAATAAcgccgccaccgccaccatcAATGCTCTTGGCCACACATCAATGTAGCAGTCCAACTACTACTCCTATTCCAGCAACAAGCAGCACTAATAACAATAATCTATTAACACCGCCCAACACAACATCGATGGCTTCCACGACAAATGCCGTTCTACACACGACTGGTAGCAGCGGTGGCAGCACACTGCAAGATCACTACAGTCTGCGTTGGAACAACCATCAGAATCATATTCTTCGAGCTTTTGATGCTTTGTTGCAGACGAAAACTCTTGTGGATGTGACACTTGTTTGCGCCGAAACAAGCATACGAGCCCACAAAATGGTCCTTTCAGCATGTTCGCCCTTCTTTCAGCGCGTCTTCGCGGAGACACCGTGTAAGCACCCAGTGATAGTCCTTAAGGATTTCCGGGGCTGGGTGGTACAAGCGattgttgattttatgtaTCGTGGAGAAATAAGTGTGCCGCAAGAACGTCTTCAGACTTTGATACAAGCCGGCGAATCGTTACAAGTCCGTGGTCTTGTAGAAAGCTCCGTACCCGAACATACACCAACACCTGCTGCATCACCAGATGACTTCAATTTATTGGACGCATCATTGATGAGTGCAGAGCTAGAGAGATGTTCAAGTTTTGAGGATGAGTCACCAACGATGGTCGGTCCAACAAGCTCGAAGTTGATTATTCCGTCTCGTCTCTTTGGTGCTGCATCGAGTGCAATGACCGCGTTAGCTACAACGCACATGCGTCGCGCTCAAGAGAGGAAGCGGGAGCGAGAAGAGCGTGAACGAGACTTTTGCGAAAGTGATCAAGAACTGCAAGGGACCGATTTGTGTACGTCACCAATGCCACGTCGAAAGCAGGCACGTCCACGTAGACGCTCTGGTGAGATGCCACATGACTTTCAGGACTTGCCAGAGCCTGCGACCATGAGTAGAGGGCAGCCAACAACGACAACTACAACGACAACATCAAGTActacaacaacgacaataTCAGAACCATTGGAGCTaagaaacaatgaaacaataacCACCAGTTCAAATGGCACCACTAATACTTTTCCTGCTGCCCCAATTACCACCCCCAATGTTGCAGATGTACAACGTGAACTGGAAGATTTGCAGGCCAAGCATTTGGCCGCTTTGCAAACTGTGATTAAGAGTGAATTATTAGATCCAATGGAAGAAGATGCGCCGGGAGATGAGACTAATGACAATGACCACGACATTGGTGGTCACACTGATGCAAGCGATTTGAATGGAGAACTTGATAGCGGCACAGGCAATGACAGTCGTGAGCATAATGAGTCACAAGATAAATCGCACGACCAACAAAACGAAACAGATGACAGACGTAAGACAAAAGATGAACACAATTTGACGGGCGAAGAATCCGATGATGATCATATACTCACAGCGGAAGATCTGCACAATCATTCCGCTATgcctggtgatgatgatattgaggAGCTCATGAACAATACCAATGACCATCGTCGAAAGGCAGTACAGTCTCCCTGTCATTCCGATGGCCCTGAGGATCTCTGTATGACAAAAAAGGATAACAACATCGATACAAGTGGTCATCATTCAATTTCTGCTTCGGATAATGAATTCAGCCCAgcgaataacaacaatagcagtAAACTAAAGGACAACAATCAACGCATTGTGCTGTCTCTGAAAGACATTCGTCATCTAAATAAACCTAGCTCAAGCTCAACGCCAAACTCCAATTCAAATAATCCTTTTATTCCCGCCCATCTTCGTGATCTGCGTTTAGAACGCACCCCAGACAGTCCCTGCCACATGGAGGCTCTCGAAGCGCAAATGCAcgctgctgcagcagcagcagttgctGCAGCTAATGCTGGTGCTGAGAATCCTTTCCAGCATATGGAGCATCAGATGGATCTCTCCTTGGCTGCCGCTGCCGCAGCTGCTGCAGTTTCGCATCAACATTCCCGGGAACGTGATCAAGCCATGCGAGAACGTGAGCACCGTGAACTACAGCAACAGCACAATGCTTTCGCCAATAGCCTGCTAGGCCCAATGGGTATGCCACCCTTTGGTCCCGGCAGTAGTTGTGGCCCCAATGGACCTAATGGCTCTTCACTCATCGGTCAAGCACCACACGAACGACTTGAAGAGAGCATGAATCGTCTAAGTAAGGAGTTTGGCAAAGAGTTTGCGCCCAGTTCTCCAATGAGTCTACCTTCTCACTTTAATCCACCGGATGGACCTCCACATCCACCTTCGCCGCTACCATTTCCGGGTATGTCATCAGCTTTGACGCTTACACCTCCGCACAtgtTTGGTTTGGATTCCCCACTTGGCTTATTTCCGCCTGGCATCGATCCTGGCAAATTATATAATCCATTGATGGAAATGAGTGATCCGCGTGATATGCCTGGTGGACCACCGCCGTTcctcaaaaagaaaaTGCCTCGGCCTAAAGGACAACATTCGGCACCACGTGGTGGTCCACCACGTTCCTGGACGAATTCAGAACTAACAGAGGCTTTGCAACATGTCTGGAACAAGAAGATGACAACATCTCAAGCCTCTCGAATCTTTGGTATACCCTATAATTCGCTTTTGATGTATGTTCGTGGCAAATATGGTAAAAGTTTGAAATTGGAACAATTACGTAAGGATTGCATAAGTGGGCCACCATTGGAAATGCTTCAGATGGGAATCAATAGTAATACAGGATCGAGTAAgggtgaaaaacaaaaagaacgcAAAGAACGTGAGAAGGAACGAAAAGatggcggtggcggtggtggtggtggtggtggaaaTGGTGGCAATAATGGACCCGGTGGTAATGGACCAAATGGTGGTCCTCCAGGCCTTGGCCCCATGGATAATGGGCCACCTGGCCTTTCTCTAGAAATGGAATTAGGTCTAGCAATGCCGGGTGGTCTACCTGGTGGACCACGTAGTGCTAGTTCTGAACCAGATTTATTGGGAGGTCCAAATGCTCTATTCAATCCATTCAATCCGCAAGGTTTCTATCCAGATTTTCCTGGTGGCTTTCCAGGTTTACCGCTTAGTATGTTAAATTTGTTACCACCCTCGGAAAGACATCaacatgctgctgctgcagctgccATGCATCACATGAACGCTGTTAGTTTGGATGAGGATTGCAAATCAGATCGTTCAAAACAATCATCTTCATTAGATGACGATTTCCCTGGTCCTTTGGCACTCAGTCGTGATGAGCATCGTAGAAGTAGTGATATGTTGTCAGCacctggtggtggtggcaatgGACCCAATGGTCCTTTGGCTGCTCCAACGAATGGCGCTGCTATGCAAGATTGA
- Protein Sequence
- MLKDIEELIQSRQLTTFALHMTEYSREPAPVPLLAKTPASSHSHSNEAMMMMSTPITPMKTATTNNRLSANAPTSPLPQMPPTTPPLNMTGHRRGVTITPPPPPSMLLATHQCSSPTTTPIPATSSTNNNNLLTPPNTTSMASTTNAVLHTTGSSGGSTLQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFNLLDASLMSAELERCSSFEDESPTMVGPTSSKLIIPSRLFGAASSAMTALATTHMRRAQERKREREERERDFCESDQELQGTDLCTSPMPRRKQARPRRRSGEMPHDFQDLPEPATMSRGQPTTTTTTTTSSTTTTTISEPLELRNNETITTSSNGTTNTFPAAPITTPNVADVQRELEDLQAKHLAALQTVIKSELLDPMEEDAPGDETNDNDHDIGGHTDASDLNGELDSGTGNDSREHNESQDKSHDQQNETDDRRKTKDEHNLTGEESDDDHILTAEDLHNHSAMPGDDDIEELMNNTNDHRRKAVQSPCHSDGPEDLCMTKKDNNIDTSGHHSISASDNEFSPANNNNSSKLKDNNQRIVLSLKDIRHLNKPSSSSTPNSNSNNPFIPAHLRDLRLERTPDSPCHMEALEAQMHAAAAAAVAAANAGAENPFQHMEHQMDLSLAAAAAAAAVSHQHSRERDQAMREREHRELQQQHNAFANSLLGPMGMPPFGPGSSCGPNGPNGSSLIGQAPHERLEESMNRLSKEFGKEFAPSSPMSLPSHFNPPDGPPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNSELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLEMLQMGINSNTGSSKGEKQKERKEREKERKDGGGGGGGGGGNGGNNGPGGNGPNGGPPGLGPMDNGPPGLSLEMELGLAMPGGLPGGPRSASSEPDLLGGPNALFNPFNPQGFYPDFPGGFPGLPLSMLNLLPPSERHQHAAAAAAMHHMNAVSLDEDCKSDRSKQSSSLDDDFPGPLALSRDEHRRSSDMLSAPGGGGNGPNGPLAAPTNGAAMQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00062887; iTF_00061037; iTF_00061226; iTF_00062039; iTF_00061865;
- 90% Identity
- iTF_00062887; iTF_00061037; iTF_00061226; iTF_00062039; iTF_00061865;
- 80% Identity
- iTF_00062887;