Acom013682.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amiota communis
Gene Symbol
lov
Assembly
GCA_037043315.1
Location
JBAMAV010001060.1:2577749-2597596[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.3e-18 2.8e-14 53.4 0.0 2 44 935 977 934 978 0.94

Sequence Information

Coding Sequence
ATGTTAAAGGACATCGAGGAGCTGATCAAAAGTCACCAACTGACTACATTTGCTTTGCATATGACTGAATATAGTCGTGAGCCAGTGCCGCTTTTGGcaaaaacaccaacaccaacaacacatCACAGCCTGAGTCACAGTAACGaagcaatgatgatgatgacaacaccAATAACACCAATGAAAACTGCAACCACAACCAATAGGCTAAGTGCAAATGCCCCAATATCGCCTTTGCCCCAAATGCCACCCACAACGCCACCATTAAATATGACAGGATATAGAAGAGGTGTCACAATAACGCCGCCACCGCCACCATCAATGCTCTTGGCCGTACATCAATGTAACAATCTAACACCTCCGCCTATTCCAACATCCAGCAgcactaataataataataataatgtattaaCACCGCCCAACACAACGTCGGTGGCCTCCACGACAAGTGCTGTTCTACATACGACCGGTAGCAGCGGTGCCAACACATTGCAAGATCACTACAGTCTGCGTTGGAACAACCATCAGAATCATATTCTTCGAGCTTTTGATGCTTTGTTGCAGTCGAAAACCCTAGTGGATGTGACACTTGTTTGCGCCGAAACAAGTATACGAGCCCACAAAATGGTCCTCTCAGCATGTTCGCCCTTCTTTCAGCGCGTCTTTGCGGAGACACCCTGCAAGCATCCGGTGATCGTCCTTAAGGATTTCCGGGGCTGGGTGGTGCAAGCGATTGTTGATTTTATGTATCGTGGAGAAATAAGTGTGCCACAAGAACGTCTTCAGACCTTAATACAAGCCGGCGAGTCGTTACAGGTCCGTGGTCTTGTAGAAAGCTCCGTGCCCGAACATACACCAACACCAGCTGCATCTCCAgatgatttcaatttattggACGCATCATTGTTGAGCTCAGAGCTAGAGAGATGTTCAAGTTTTGAAGAAGATTCCCCAACGATGGTCGGTCCAACAAGCTCAAAGTTAATTATCCCATCTCGTCTCTTTGGTGCTGCATCGAGTGCAATGACTGCATTAGCGACGACACACATGCGTCGTGCTCAAGAGAGAAAACGAGAGAAAGAAGAGCGTGAACGTGAATTTGCTGAAAGTGATCAAGAACTGCAAGGGACCGATTTGTGTACATCACCAATGCCACGTCGAAAGCAAGCACGTCCACGTAGACGTTCTGGTGAGATGGCACATGACTTTCAGGACTTGCCAGAGCCGGCGACAATGAGTAGAAATGAACCCACAACGACAGCTACAACGACAACAAGTACTACAACAGCGACAATATCAGAACCATTGGAGCTAAGaaacaatgaaacaacaacCTCCATTTCAAATAGCACCACTACTACTTTTCCAGCTGCTGCCACAATCGCTACCCCCACTGTTGCAGATGTACAACGTGAACTGGAAGATTTGCAGGCCAAGCATTTGGCCGCTTTGCAAACTGTGATTAAAAGTGAATTGTTGGACCCAATGGAAGAAGATGCGCCAGAAGATGAGGCTAATGACCATGATATTGGTGGTCACGCTGATGCAAGTGATTTGAATGGTGAACTTGATAGCGGCACAGGCAATGACAGTCGTGAACATAATGAGTCTCAGGATAAATCAACCGACCACCATAAAGAATCAGATGACAGACATAAGACAAAAGATGAAGACAATATGATGGGCGAAGAATCCGATGATGACCATTTAATCACAGCTGAAGATCTGCACAACCATTCCGCTATGACTGGCGATGATGACATTGAGGAGCTCATAAACAACTCTAATGATCATCGTCGAAAGGCAGTACAGTCTCCTTGTCATTCTGATGGACCTGAGGATCTCTGTATGACAAAAAAGGATAACAACATCGATACTAGTGGTCACCATTCTACTTCTGCTTCGGATAATGAATGCAGTCCagcgaacaacaacaatagcagcaaACTTAAGGACAACAATCAACGCATTGTGTTGTCACTGAAAGATATACGTCATCTAAATAAACCTAGCTCAAGCTCAACACCAAACTCCAGTTCAAATAATCCTTTTGTTCCCGCCCATCTACGTGATTTGCGTTTAGACCGCAACCCGGATAGTCCCTGTCACATGGAAGCCCTCGAAGCACAAATGCACGCTGCCGCTGCAGCAGCAGTTGCTGCAGCTAATGCTGGTGCTGAGAATCCTTTCCAGCACATGGAGCATCAAATGGATCTCTCCttggctgctgctgccgcaGCTGCAGCTGTTTCGCATCAACATTCCCGGGAACGTGATCAAGCCATGCGAGAACGTGAACATCGTGAATTACAGCAACAGCACAATGCTTTCGCCAATAGCCTGCTAGGTCCAATGGGTATGCCACCCTTTGGTCCCGGCAGTGGTTGTGGCCCCAATGGACCTAATGGCTCTTCAATGATGGGTCAATCACCACACGAACGACTTGAAGAGAGCATGAATCGTCTCAGTAAGGAATTTGGCAAAGAATTTGATCCCAGTTCACCAATGAGTCTACCTTCACACTTTAATCCACCGGATGGACCTCCACATCCACCTTCGCCGCTACCATTTCCGGGTATGTCATCAGCTTTGACGCTAACTCCACCGCACATGTTTGGATTGGACTCACCACTTGGTTTATTTCCACCTGGCATCGATCCTGGCAAATTATATAATCCACTGATGGAAATGAGTGATCCACGTGATATGCCTGGTGGACCACCGCCATTcctgaaaaagaaaaTGCCTCGCCCTAAAGGACAACATTCAGCACCACGTGGTGGTCCACCACGTTCCTGGACGAATTCAGAACTAACAGAGGCCTTGCAACATGTCTGGAACAAGAAGATGACAACATCACAAGCCTCTCGTATCTTTGGTATACCGTATAACTCCCTATTGATGTATGTTCGTGGCAAATATGGTAAAAGTTTGAAATTGGAACAATTACGTAAGGATTGCATAAGTGGGCCACCATTGGAAATGCTTCAGATGGGCATCTCAAGTAATACAGGATCAAGTAagagtgaaaaacaaaaagaacgcAAAGAACGTGAGAAAGAACGAAAAGAAGGCGGCGGTGGTGGTAGTGGAAGTGGTGGCAATAATGGTCCCGGTGGTGCTAATGGACCAAATTGTGGTCCTCCAGGCCTTGGCTCCATGGATAATGGACCACCTGGCCTATCACTAGAAATGGAATTGGGTCTAGCAATGCCTGGTGGTCTAACTGGTGGACCACGTAGTGCTAGTTCTGAACCAGATTTATTGGGAGGACCAAATTCTCTCTTTAATCCATTCAATCCACAAGGCTTCTATCAAGATTTTTCTGGTGGCTTTCCGGGTTTACCGCTTAGTATGTTAAATTTGTTACCACCCTCGGAAAGACATCaacatgctgctgctgcagctgccaTGCATCACATGAATGCTGTTAGTTTGGATGAGGATTGCAAATCAGATCGTTCAAAACAATCATCTTCATTAGATGATGATTTCCCTGGTCCTTTGGCACTCAGTCGTGATGAGCATCGTAGAAGTAGTGATATGTTGTCAGCgcatggtggtggtggtggcaatggACCCAATGGTCCTTTGGCTGCTCCAACGAATGGTGCTGCTATGCAAGATTGA
Protein Sequence
MLKDIEELIKSHQLTTFALHMTEYSREPVPLLAKTPTPTTHHSLSHSNEAMMMMTTPITPMKTATTTNRLSANAPISPLPQMPPTTPPLNMTGYRRGVTITPPPPPSMLLAVHQCNNLTPPPIPTSSSTNNNNNNVLTPPNTTSVASTTSAVLHTTGSSGANTLQDHYSLRWNNHQNHILRAFDALLQSKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFNLLDASLLSSELERCSSFEEDSPTMVGPTSSKLIIPSRLFGAASSAMTALATTHMRRAQERKREKEEREREFAESDQELQGTDLCTSPMPRRKQARPRRRSGEMAHDFQDLPEPATMSRNEPTTTATTTTSTTTATISEPLELRNNETTTSISNSTTTTFPAAATIATPTVADVQRELEDLQAKHLAALQTVIKSELLDPMEEDAPEDEANDHDIGGHADASDLNGELDSGTGNDSREHNESQDKSTDHHKESDDRHKTKDEDNMMGEESDDDHLITAEDLHNHSAMTGDDDIEELINNSNDHRRKAVQSPCHSDGPEDLCMTKKDNNIDTSGHHSTSASDNECSPANNNNSSKLKDNNQRIVLSLKDIRHLNKPSSSSTPNSSSNNPFVPAHLRDLRLDRNPDSPCHMEALEAQMHAAAAAAVAAANAGAENPFQHMEHQMDLSLAAAAAAAAVSHQHSRERDQAMREREHRELQQQHNAFANSLLGPMGMPPFGPGSGCGPNGPNGSSMMGQSPHERLEESMNRLSKEFGKEFDPSSPMSLPSHFNPPDGPPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNSELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLEMLQMGISSNTGSSKSEKQKERKEREKERKEGGGGGSGSGGNNGPGGANGPNCGPPGLGSMDNGPPGLSLEMELGLAMPGGLTGGPRSASSEPDLLGGPNSLFNPFNPQGFYQDFSGGFPGLPLSMLNLLPPSERHQHAAAAAAMHHMNAVSLDEDCKSDRSKQSSSLDDDFPGPLALSRDEHRRSSDMLSAHGGGGGNGPNGPLAAPTNGAAMQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00062687;
90% Identity
iTF_00062687;
80% Identity
iTF_00061226;