Amin019354.1
Basic Information
- Insect
- Amiota minor
- Gene Symbol
- Runx1
- Assembly
- GCA_037043295.1
- Location
- JBAMAW010002174.1:298524-299087[+]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.7 2.2e+04 -4.4 2.8 52 72 10 30 4 43 0.63 2 3 5.9 2.8e+04 -4.7 2.7 61 77 40 56 31 65 0.53 3 3 4.5e-52 2.1e-48 163.8 0.0 3 93 96 186 94 187 0.98
Sequence Information
- Coding Sequence
- ATGCATctaacaacgacaacagcaacTAATTCCACGGCGAattcaacaaacaataataacaacagttccagtaacaacaacagttcgaacagcaataataatggTACAACAAATGGCTCGaataacagtaacaacaacaacaacaatagctcaatttcaaataacaacaacaataacaacaacaacaacacaacagaacaAAATACTCCGCCAACAGCAGCTCAACTGTTAAATGAGGCTTATACAAAAATGACATCGGATATATTGGCCGAAAGGACCTTAGGTGATTTTCTTACCGAACATCCCGGCGAATTGATCCGGACAAGTAGTCCGCTTTTTGTTTGCACTGTTCTACCACCGCATTGGCGatcaaataaaacattacCGGTCGCTTTTAAAGTTGTATCACTTGGCGATATTATGGATGGGACAATGGTCACGGTACGTGCTGGCAATGATGAGAACTATTGTGCGGAATTGCGTAACTGTACGGCCGTAATGAAGAATCAGGTAGccaaatttaatgatttacgCTTCGTTGGACGCAGTGGTCGGGGTgagtaa
- Protein Sequence
- MHLTTTTATNSTANSTNNNNNSSSNNNSSNSNNNGTTNGSNNSNNNNNNSSISNNNNNNNNNNTTEQNTPPTAAQLLNEAYTKMTSDILAERTLGDFLTEHPGELIRTSSPLFVCTVLPPHWRSNKTLPVAFKVVSLGDIMDGTMVTVRAGNDENYCAELRNCTAVMKNQVAKFNDLRFVGRSGRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00966938;
- 90% Identity
- iTF_00061701;
- 80% Identity
- -