Basic Information

Insect
Amiota mariae
Gene Symbol
-
Assembly
GCA_035041805.1
Location
JAWNKV010000325.1:3121204-3124104[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 6.3e-05 0.0081 17.5 4.4 1 23 213 235 213 235 0.97
2 15 0.0071 0.92 11.0 0.7 2 23 271 292 270 292 0.96
3 15 2.9e-05 0.0038 18.6 1.9 1 23 385 408 385 408 0.97
4 15 0.01 1.3 10.5 2.3 1 21 415 435 415 436 0.93
5 15 0.026 3.3 9.3 0.9 1 23 445 467 445 467 0.93
6 15 6.5e-05 0.0084 17.5 1.3 2 23 475 497 474 497 0.96
7 15 0.00033 0.042 15.3 3.5 1 23 504 526 504 526 0.98
8 15 0.022 2.8 9.5 0.3 2 21 553 572 552 573 0.94
9 15 0.0049 0.64 11.5 4.6 1 23 621 644 621 644 0.98
10 15 0.013 1.6 10.3 0.2 2 23 682 704 681 704 0.94
11 15 0.0002 0.026 15.9 0.8 2 23 736 758 735 758 0.95
12 15 0.0023 0.29 12.6 0.5 1 23 772 794 772 794 0.96
13 15 0.00035 0.046 15.1 3.8 1 23 800 822 800 822 0.99
14 15 0.00012 0.016 16.6 4.1 1 23 828 850 828 850 0.97
15 15 0.00018 0.023 16.1 6.1 1 23 856 878 856 878 0.96

Sequence Information

Coding Sequence
ATGGCGCTTAACAGAATCTGTAGAACATGCGATGTAACTAATTCCGCAGAGATATTTCAACTGAATTCATGTCCAAAAAAATATGGTGGAAAGATGCTCATGGATTTGTTAAAAGAAGTAACTAAAATTAATATTGGAAAAGATCACAAAGAAAAGTTGCCACAGTTCATTTGCTGCACTTGCGTCCGTAAACTACAAAATGCCtatgattttgttattcaaGCTCAtgaagcaaataaacaaatgatggATTTTCTGAATGGCATTAATACAGAATGCCTGCAAGAAGTTCCAATGGAGTATTGCAATGAACAATTCTTGGAGATAAAGTTGGAAGAAGGCAGTTACGAAGAGTcaattccaaaaaatataacttatTTGAGTGATCAGAGCAAATTagatattaaaacaaatacatcAGATGATGAGAGAAATGTTAACCAAACAATAGATCCTTTAGTTATGAGtaaaagtatgaaaaacacTGCAAAACGACCAAAGGAAACCATTGCTGATGATACTGTAAGCTCCgaTGAATATGGTGAATTACCATTACAACAGCgaaaactcaaacaaaaacagtCGAATATATCAAAAACGACGAATGATAATAAGCAATTGCGGAAGACTGAACAGTTCATTTGTAATACTTGTAAGCGAACATTTTCAAAGAAGAATCACTTAGTTACTCATCTAAAAAtacatgaagaagaaaaaacgaaaacaaaagaaacagcTACTCTTCCGGAATTTAAGCAAACTAAAGAAGTTGATATCAACCTATGCAGGCCGCATGGCTGCAAACTAATTCAGTGCATGATTTGTCTAAACAAGTTCACGAAAATCTCTGATCTAcgaaaacatttaaatgagCACCCggtcatttcttcatttacaaAACGTTCCAACGAATCATTGCAAGATATAGCCAACCATTTCTATAATTACTTTAAAGATGCAactgaagaaaatttaataacgAAAATTCGCAATGATTTaagcaataaaatgtttgataatttttacTCAATAACTAATCAATGTGGGTATGAATTAAGTTTGTCGAGTTCAGACACTGAAAGTGAAGTTGCATCTCAATCGGAATCGGAAACAGAATCAGAAGAGCCCAAATGTAAAGAGTCAAGAAAGAGCTACAATTGTGAAttgtgcaataaaaaatatattcggAAATATCAACTTTTTGATCACCAAAGGCTTGAACATGAATGGAGTGAAGCTGTTCATGTTTGCAGAAGATGCGATGCTAGATTTGTAAATAAACATCTACTGGAGCATCATTATGAAACACAatgcaaaaatacaaataagcgTTTCATATGTAAGATGTGCCCTCTTAGATTTCGATGGAAACGCAATTTATTAACACATTATGATGACCATAGGAAGAACaaaGAAACATTACAATGTTCGAAATGCAATCGAAGCTACGAtgacaaaaaatcatttactaTACACATGCTGAAAGCGCATGCGGATGGTTCTAAAATGTTCTCTTGCCAATGGTGTAGTCGAACATTTTATCGGAGGGATTATatgttaaaacatttaaagcgCCATGGTATTAGAGAAAAAGATCTGCCTCTCGCTGAAATGCTAGTTATAGCAACTTCAAATGCCAATGGTTATAAAATCATACAATGCAAAGTTtgtaatttacaatttgaacGAATTTGTGATTTAAAAGAACACATTCTATTAGAGTTGAAATTAAACTTATCGAAACATCAAAGCTACGAATCACTAACCAATTACACAATTACAAATGAATCTGGTTTTGAATTACATCTCGATGATTCGGAAACTGATGAAGAAGATTCAGTTGAGAGTAAGCAGATGTCTTACAAATGTGAGATTTGCCAGGTTCAGTGTAAGCGCAAGTTTGAAATGTTTCAACATCAAAGATCAATGCATCCATTCGAACATTTGCCACATTCTTGCGAGAagtgtatttttaaatgtgtttcaaagaaTATACTTGATCATCATCGGAATACTCAATGTTTCAATGAGCAGAAGCAGTTATCATGTGAGAAAtgttcttataaatttatgtggcCTGAAAATTTGGCACGGCATATGTTGCTACAGCATCCAAACGAAGTAGATAGCAAAATTTCTTCAGAAGAGTCTAACATAAATAACTGCAAGGAGGTTGTTGGAGAAACAGATGCGACTGCCCAACTGCAGTGTCCACATTGTGATAAATCTTACCAATTACAAGGACGCCTTAATAATCATATACGCGACGTGCACATAAATGccgataaaaagaaaaaagatgcTAAAAGAAAGTATCTTTGCTCCTTATGTGGAAAAAAATCTTTGTCGGCAGCACACTTAGCTACACATATGCGAATACATACTGGAGAGAAACCATTTAAATGTGATATGTGCGAAATGGCTTTTCGTCGACATTACGATATGTTGCAACACCGTAGGAGACACACGGGCGAAAAGCCTTTTCATTGCACTGTTTGTGGTAAAGATTTTGCTATGTCTTGCAAACTGAAACGGCACATGTTAATACATAGTGGGTTAAAGCCACACAAATGTTCAGTATGTGGTAAATGCTATCGACAATCTAAAGATTTAAAACTGCATCTTTTTCAACACACTGGCGAAAAACATTAG
Protein Sequence
MALNRICRTCDVTNSAEIFQLNSCPKKYGGKMLMDLLKEVTKINIGKDHKEKLPQFICCTCVRKLQNAYDFVIQAHEANKQMMDFLNGINTECLQEVPMEYCNEQFLEIKLEEGSYEESIPKNITYLSDQSKLDIKTNTSDDERNVNQTIDPLVMSKSMKNTAKRPKETIADDTVSSDEYGELPLQQRKLKQKQSNISKTTNDNKQLRKTEQFICNTCKRTFSKKNHLVTHLKIHEEEKTKTKETATLPEFKQTKEVDINLCRPHGCKLIQCMICLNKFTKISDLRKHLNEHPVISSFTKRSNESLQDIANHFYNYFKDATEENLITKIRNDLSNKMFDNFYSITNQCGYELSLSSSDTESEVASQSESETESEEPKCKESRKSYNCELCNKKYIRKYQLFDHQRLEHEWSEAVHVCRRCDARFVNKHLLEHHYETQCKNTNKRFICKMCPLRFRWKRNLLTHYDDHRKNKETLQCSKCNRSYDDKKSFTIHMLKAHADGSKMFSCQWCSRTFYRRDYMLKHLKRHGIREKDLPLAEMLVIATSNANGYKIIQCKVCNLQFERICDLKEHILLELKLNLSKHQSYESLTNYTITNESGFELHLDDSETDEEDSVESKQMSYKCEICQVQCKRKFEMFQHQRSMHPFEHLPHSCEKCIFKCVSKNILDHHRNTQCFNEQKQLSCEKCSYKFMWPENLARHMLLQHPNEVDSKISSEESNINNCKEVVGETDATAQLQCPHCDKSYQLQGRLNNHIRDVHINADKKKKDAKRKYLCSLCGKKSLSAAHLATHMRIHTGEKPFKCDMCEMAFRRHYDMLQHRRRHTGEKPFHCTVCGKDFAMSCKLKRHMLIHSGLKPHKCSVCGKCYRQSKDLKLHLFQHTGEKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00061333;
90% Identity
iTF_00062174;
80% Identity
-