Basic Information

Insect
Amiota mariae
Gene Symbol
-
Assembly
GCA_035041805.1
Location
JAWNKV010000325.1:3154441-3157565[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2.8 3.6e+02 2.9 0.3 2 16 57 71 56 73 0.87
2 17 0.00043 0.056 14.9 1.9 1 23 256 278 256 278 0.99
3 17 0.006 0.77 11.3 7.5 2 23 286 307 285 308 0.94
4 17 0.017 2.2 9.8 0.3 2 23 344 365 343 365 0.96
5 17 7e-05 0.0091 17.4 0.9 1 23 452 475 452 475 0.96
6 17 0.052 6.7 8.3 1.3 1 21 482 502 482 503 0.94
7 17 0.042 5.5 8.6 4.0 1 23 512 534 512 534 0.98
8 17 1.5e-05 0.0019 19.5 0.7 2 23 542 564 541 564 0.96
9 17 0.0015 0.19 13.2 4.6 3 23 573 593 571 593 0.97
10 17 0.029 3.7 9.1 0.0 2 21 620 639 619 640 0.94
11 17 0.0048 0.62 11.6 5.0 1 23 688 711 688 711 0.98
12 17 0.006 0.78 11.3 0.4 2 23 749 771 748 771 0.94
13 17 4.6e-06 0.0006 21.1 1.0 2 23 808 830 807 830 0.95
14 17 0.0017 0.21 13.0 0.3 1 23 844 866 844 866 0.95
15 17 0.00067 0.086 14.3 2.7 1 23 872 894 872 894 0.99
16 17 2.6e-07 3.3e-05 25.0 2.4 1 23 900 922 900 922 0.98
17 17 0.00011 0.015 16.7 4.5 1 23 928 950 928 950 0.97

Sequence Information

Coding Sequence
atgcAATCGAAAAGAATTTGCAGAACCTGTAATGTCTCTGATTCCATAGAGACTTTTGAGTTAAATACACGCCCTAAGAAATATCAAGGAAAGATGCTTTTGGATTTGTTGATAGAAGTAACTAAAATTGATGTCAAAATGGAGCACATAGAGAAGCTTCCACAGTGCATATGTCGCATTTGCGATCGTAAGCTAAAAAATgcttatgattttgttattcaaGCTCGTGATGCAAATGTAGAAATGCTAAATTACTTCaaccaaaataaagaaattcaatcCAAAACAGAATGTTTGCAGGAGATTCCTATTGAAGTTTGTACGGAACAATCAAACGAACTTAGTTTTAAAGAAGAACCTTGCGAAATCGAATCGGGTGGTGAAGAAAATGTTGAAGAATCATTGGATCCTCTagtaatgaatgaaattgtgaaaaacaGTGAACTTGATGAATTACAATTGAATCGACGGAGCGAGaaagtaaaagcaacaacacGTTCCTCAAGTACAGTTAATAAACGACACAGGCGTTTAGGAAAGAAGCAACAGACAAAAAAGGTTTGTCCTGAACAATTAGTTGAAGTACAATTAAAAAACGAACCTTGCGAAGAGTCTATCAAAGAAAATACCAGCCATTTAGAGAAAGATAGTGATTTAAGTGATAATTCAAGTGAGAAAAGTGTGAAAAGtgctaaaaaacaaaaaaaagaaaattcaaacgCTAATGAATCGACAAATTCCACAGTATCAGATGGCGAAAGGTCATTCAAATGTGATCAATGTGAAAAATCTTATCGATGGAAACGCAACTTGATTGTACATAAACGTAGCCAtttagacaaaaataaatgggTCAGTTGCCCCCATTGCAAAcggaaattcatgcataaagaAAGCTATATTTCTCACTTGAAAAAGCATCATGAAGAAGAATGGAAAGCGTTGAAAATTTCGGCCACTCTTTCAGAACAGAGACAATGTAAATCAGTCAACATAAATCTTTGTCAACCGAATGGATGCAAACTAATACAATGCATGATTTGTCTACAGAAATATACTAATATTAATGATCTGcgaaatcatttaaatgaacATCCAGATATTTCTTCGTTTGCAGAACGACCCAATGAGACAATACAGGAAATTGCCGACGGTTTCTTAATTGACTGTAAAGATTTAACTGAAGAAATGTTGATTAAGCGAATACACACAGATTTAAGTGCTAAAAAGTTTGATAAGTTTTACTCAATTACAAATCAATCAGGTTATGAGTTAAGTTTATCGAGCTCAGAGAGTGAAAGTGACTTCGATATTGAATCGGAAGAGCACTCAAATAAGGTTTCAAACAAAAGCTACGCTTGTGAATTATGCAACGAAACATTTGTCCGGAAATACCAAGTTTTCAATCACCAAAGGGAACAACATCAGTGGAAAGATGCGGTTCATGTTTGCAGACGATGCGATGCGCGATTTGTAAACAACCTACTACTGGAACATCACTACAAATCACAGTGCAGAAATGCACAAAAGCGTTTCAAATGCCGAAAATGCCCTCTAAGATATCGATGGAAACACAATTTAGTAACACATTACAGGGAACATCGAAAAAATAAAGAAACATTACAATGTTCGGAGTGCAATCGTACCTATGAtgacaaaaaatcattaaccATCCACATGCTTAAAATACATGCAGATGATtccaaaatgttgttttgccATTGGTGTAGTCGAACATTTTACCGGAGAGACTACATGTTAAAACACCTTAAACGTCATGGCATAAGAGAAAAAGATTTGCCTCTTGCTGAAATGCTTGTTATGGCAACTTCCAAACCCAATGGtgataaaatcattcaatgcaaaatttgttatttacaatTCGAGCGAATCAATGAGTTAAAAGTACACATTCTattggaattaaaattaaatctatCGAGACATCAGAGCTACGAATCGCTCGCCAATTACTCAATTACAAATGAATCTGGCTTCGAACTACATCTCGATGACTCCGAAacagatgaagaagaaacaacTGAGAATAAGCAGATTTCTTACAAATGTGAAATTTGCCAGCTTCAGTGTAAGCGCAAGTTCGAAATGTTTCAACATCAACGATCAATGCACCGTTTTGAACATTTACCACATTCTTGCGAGAAGTGTGTTTTTAGATGTGTATCAAaggaAATACTTGATCATCATCGGAGTACACAATGTTTTAATGAGCAAAAGCAGTTGTCTTGTGAAAAAtgttcttataaatttatgtggcCTGAAAACTTGACTCGGCATATGTTGCTCCAGCATCCAGTCGAAACCGAAAACAAGATTACTCCACTAGAATCTAACAAAAGTAGTTCGACAGATACGTCTCTTCGAAATATTGATGGAGAAACAACTGCGATTGCTCAATTGCAGTGTCCACATTGTGATCGAACTTATGTTCAACAATCTCGGCTTAATAATCATATAAGAGATGTTCATATAAAAGGtgacagaaagaaaaaagaagctgAACGAAAATTTCTCTGCTCACTATGTGGCAAAGAATCCCAGTCGGCCAGGGATTTAGATATACATATGCGAAGACATACTGGAGAGAAACCATTTAAATGCGATATGTGTGAGATGGCATTTCCGAGAAACTGTGAGATGATGCAACATCGAAGAAAACACACAGGGGAAAAACCTTATCACTGCACTGTTTGTGGCAAGGATTTTGCCCGATCTGACAAACTAAAGCGCCATATGCTGACTCATAGTGGCTTGAAGCCATACAAATGcacattctgtgaaaagtGCTATCGTCAATCTAAAGATCTGAAAATACATCTCATACAGCATACTGGATAG
Protein Sequence
MQSKRICRTCNVSDSIETFELNTRPKKYQGKMLLDLLIEVTKIDVKMEHIEKLPQCICRICDRKLKNAYDFVIQARDANVEMLNYFNQNKEIQSKTECLQEIPIEVCTEQSNELSFKEEPCEIESGGEENVEESLDPLVMNEIVKNSELDELQLNRRSEKVKATTRSSSTVNKRHRRLGKKQQTKKVCPEQLVEVQLKNEPCEESIKENTSHLEKDSDLSDNSSEKSVKSAKKQKKENSNANESTNSTVSDGERSFKCDQCEKSYRWKRNLIVHKRSHLDKNKWVSCPHCKRKFMHKESYISHLKKHHEEEWKALKISATLSEQRQCKSVNINLCQPNGCKLIQCMICLQKYTNINDLRNHLNEHPDISSFAERPNETIQEIADGFLIDCKDLTEEMLIKRIHTDLSAKKFDKFYSITNQSGYELSLSSSESESDFDIESEEHSNKVSNKSYACELCNETFVRKYQVFNHQREQHQWKDAVHVCRRCDARFVNNLLLEHHYKSQCRNAQKRFKCRKCPLRYRWKHNLVTHYREHRKNKETLQCSECNRTYDDKKSLTIHMLKIHADDSKMLFCHWCSRTFYRRDYMLKHLKRHGIREKDLPLAEMLVMATSKPNGDKIIQCKICYLQFERINELKVHILLELKLNLSRHQSYESLANYSITNESGFELHLDDSETDEEETTENKQISYKCEICQLQCKRKFEMFQHQRSMHRFEHLPHSCEKCVFRCVSKEILDHHRSTQCFNEQKQLSCEKCSYKFMWPENLTRHMLLQHPVETENKITPLESNKSSSTDTSLRNIDGETTAIAQLQCPHCDRTYVQQSRLNNHIRDVHIKGDRKKKEAERKFLCSLCGKESQSARDLDIHMRRHTGEKPFKCDMCEMAFPRNCEMMQHRRKHTGEKPYHCTVCGKDFARSDKLKRHMLTHSGLKPYKCTFCEKCYRQSKDLKIHLIQHTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00061335;
90% Identity
-
80% Identity
-