Amar010466.1
Basic Information
- Insect
- Amiota mariae
- Gene Symbol
- Rel
- Assembly
- GCA_035041805.1
- Location
- JAWNKV010000326.1:1447296-1450388[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-50 8.4e-47 160.2 0.2 1 168 176 358 176 359 0.94 2 2 2.5 1.3e+04 -3.0 0.1 111 157 874 917 863 928 0.57
Sequence Information
- Coding Sequence
- atgataCACGAGTTTTATGATTTGGATACGCAGGAAAAAATTCGTTGTTATAGTGAATCTTCCAATGCAAGCACAAGTGGCTATTCAACAATGTCCCCAGGACCAGGTTCAAATACTCAAGTGATTGGCAATAACTCACCATCGtctcaattttcaaattctcCCGCGCAATCTCCAgcaacattattattacaaacaGAGTTTTCTAACCTCAATTTACCACCATCTTCaccaatgcaacaacaacaacaacagcagcaacaacataactCACCACACTATAACAGTCAGCTGACAACAGCGACGGCGGCATtgacacaaaacaataatatgttTATTGGTGGCGTTGGTCAGCAGCATCAATTTTATAATGCTCCACAATATGTAAATGTGAATCCTGGTGGAAGCAACAGtttgcaacaacatcagcagcagcagcatcaatcAACATTGACACCCAATATGATGATGGGCATGGTTGAACAAATGAAAGGATCCGATATGAATCAAAGATATTCAGCTATGTTGGAGATTTTGGAGCAGCCTGTGGATAAATTTCGTTTTCGCTATAAATCGGAAATGCATGGGACACATGGCTCGCTGAATGGCGTCAATTCAAAGCGAACTCCAAAAACATTTCCCGAGGTAAGATTGGTAAACTATACGGGCCCCGCCATTATACGTTGCAGTCTTTTCCAAACAAACTTGGACAGCCCACATTCGCATCAGTTGGTAGTGCGTAAAGATGACCACGATGTTTGTGATCCACATGATTTACACGTTTCGGTAGAACGTGGCTATGTTGCCCAGTTCATGAATATGGGAATCATACACACAGCCAAGAAGTTTATATTGCAAGAGTTGCTGAAGAAAAAGGAAGACCGATTGGTTTTTCGCATGGGCAGACGGGAATtgtcaacaaaacaaaagcaagaaTTATACAAGGAAACGGAAAAGGAAGCAAAggacatgaatttgaatcagGTGCGTCTTTGTTTCGAGGCCTTTAAAATAGATGACAATAATATTTGGACGCCAATTGCTGCGCCGGTTTACACGAATCCCATTAATAACCGCAAATCGGCACAAACAGGAGAACTGCGCATCGTAAGGCTCAGCATTGCGTCTGGCAGTGTCTTGGGTAATGATGAGCTCATTTTGCTGGTCGAGAAAgtgagcaaaaaaaatataaaagttcgTTTTTTCGAACAAAATGAGGATGATGAAACGGTTTGGGAGGAATTCGCCAAGTTTCGTGAATCAGATGTGCATCATCAGTATGCCATTGTGTGTCAGACACCACCTTATAAAAATAAGGATATAGAAAAACAAGTAGAAGTTTTTATAGAACTCATACGACCTTCAGATGATGAACGGTCCTTCCCAGCTTTACCTTTCCGCTATAAGCCACGCGATGCCATTGTGTCACGCAAACGTCGGCGCACTTGTTCGACGGCAACGAGTAGTTCTGGAACAGGCAGCGCAACCAATTCCCTAGAGTTACCTAAACCTGTAGAAGAGCAAGCAGCCCAATTGGCAGTGGGTAGATATGCCCAAGGCACAATCAGTGAAGAGTTTGACAAAGActtacaaataaaagaattcaTTGACAACTCATCTTTTCAACACATCATAAATGACAGTTCCAAGGAACTGGTGAATTACTTTCCATCGCTAATGGATCCGAATTACCCACTCGATTTTGGTGAGTTGCAAAACGATGGCAGCTCTTCTTCAACTTCTCTTTCGCTTGATGTGAAGCAGCAGAAACTATTGAAACTAGTTGAAGGCCCAACATCAACTGCGACACCTAGCGATATAACCAATGTCTACTTACAACgcatattcaaaatcaatgatAGCTTGCGTGTTGGCAAATCTGTACCGGATCCAAAGGTCGTTACTGCTTACGCCAAACAAATCAAGGATTTGTTTTTAGAACATGCCGATAAAAACTATAATGGCGATACACTGGTCCACGAGGTGATCACCCAGAAGCCAGACAATGTGAAATTGGCcattaaaacatttgaaatacTAAGCTTTTTCAAACTGCAGGAGCTCGTCAATCAACCAttgaacaataacaatgagaGCGGATTGCATTGTGCTTGTCTCCATGATCGTCGTCACTACATTCGTCCGCTGCTGGGCTTACAATGTAATCCAAATATACAGGATCTACATAATAATACACCGCTTCATGTGGCCGTCAGAGAGGAGAACACAAAGTGCATAGAACTCTTCCTAAGCTCAAATTCTAAAGTCAATTTGAGTTTGAAAAACGATCATGGTTTGACGCCACTGCATATGGCATTGCGTCAGAATAACTTTGATGTAGCCAAGAAACTTGTTAAATATGATCGCGAAGCTATCAATGTAACCAATAAAGATGGCGACAATGCACTTCATCTGGCAGTCACACAGCAGAATGTCGAACTGGTGGTACTCATTCTGGATGCTCAAAATGTCGAAGATATATTGACGGCACGCAACACCGCAAATTGTACCGCATTGGAGGTGGCAAAACAGTTGGGTACAAAATCAAGCAACTCCATTGTCCATTTGCTGGAACCATTGTATAAGCATTTGCCACAAGTAGAGATGATAACGACGATCAAAGAGGAAATCGAAAGTTCTTCgacagatgatgatgaagaaagtAACGAAGCAATggacacagatacaaaaacaattgtcaCTGAGTTTTGTACGGAAATTAAGACAGAAGAAAATAGTTTCGAAGTCGATAATGACTATCAACCAAGTGATACTATTAATCTACAGATTATACTTAATGATAGAAACAGATTTAATACACTGGCAAAAGCACTAGATCAGAAGAAAGTAGGAGCAGATAAACCGATATGGAAACTATTAGCTGAAAAGCTGAAGATGCATCATTTAATGGTTCTGTGGAGGAATGCCGAAGCAATGCTGAATTATGTTAAAGTCAAGTGTAATATCAATAGTAGCGTCTTTGCCAGAGCTCTCGCTGAGATTGACCCAGAAGCTGAGCGTCTATtgcattaa
- Protein Sequence
- MIHEFYDLDTQEKIRCYSESSNASTSGYSTMSPGPGSNTQVIGNNSPSSQFSNSPAQSPATLLLQTEFSNLNLPPSSPMQQQQQQQQQHNSPHYNSQLTTATAALTQNNNMFIGGVGQQHQFYNAPQYVNVNPGGSNSLQQHQQQQHQSTLTPNMMMGMVEQMKGSDMNQRYSAMLEILEQPVDKFRFRYKSEMHGTHGSLNGVNSKRTPKTFPEVRLVNYTGPAIIRCSLFQTNLDSPHSHQLVVRKDDHDVCDPHDLHVSVERGYVAQFMNMGIIHTAKKFILQELLKKKEDRLVFRMGRRELSTKQKQELYKETEKEAKDMNLNQVRLCFEAFKIDDNNIWTPIAAPVYTNPINNRKSAQTGELRIVRLSIASGSVLGNDELILLVEKVSKKNIKVRFFEQNEDDETVWEEFAKFRESDVHHQYAIVCQTPPYKNKDIEKQVEVFIELIRPSDDERSFPALPFRYKPRDAIVSRKRRRTCSTATSSSGTGSATNSLELPKPVEEQAAQLAVGRYAQGTISEEFDKDLQIKEFIDNSSFQHIINDSSKELVNYFPSLMDPNYPLDFGELQNDGSSSSTSLSLDVKQQKLLKLVEGPTSTATPSDITNVYLQRIFKINDSLRVGKSVPDPKVVTAYAKQIKDLFLEHADKNYNGDTLVHEVITQKPDNVKLAIKTFEILSFFKLQELVNQPLNNNNESGLHCACLHDRRHYIRPLLGLQCNPNIQDLHNNTPLHVAVREENTKCIELFLSSNSKVNLSLKNDHGLTPLHMALRQNNFDVAKKLVKYDREAINVTNKDGDNALHLAVTQQNVELVVLILDAQNVEDILTARNTANCTALEVAKQLGTKSSNSIVHLLEPLYKHLPQVEMITTIKEEIESSSTDDDEESNEAMDTDTKTIVTEFCTEIKTEENSFEVDNDYQPSDTINLQIILNDRNRFNTLAKALDQKKVGADKPIWKLLAEKLKMHHLMVLWRNAEAMLNYVKVKCNINSSVFARALAEIDPEAERLLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00060873; iTF_00062513;
- 90% Identity
- -
- 80% Identity
- -