Basic Information

Gene Symbol
stc
Assembly
GCA_963989295.1
Location
OZ022389.1:14461937-14467948[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 2 3e+04 -4.3 1.6 15 19 507 511 506 511 0.81
2 15 0.19 2.8e+03 -0.8 0.3 4 10 540 546 539 548 0.93
3 15 7e-07 0.011 16.5 17.2 3 18 556 571 542 572 0.88
4 15 5.1e-06 0.077 13.8 14.0 1 18 608 625 608 626 0.95
5 15 0.28 4.2e+03 -1.4 1.2 5 10 653 658 653 658 0.96
6 15 6.7e-10 1e-05 26.2 14.4 1 18 664 681 664 682 0.98
7 15 2 3e+04 -5.1 3.1 6 12 712 718 712 718 0.88
8 15 7.6e-05 1.1 10.0 12.2 4 18 729 743 722 744 0.86
9 15 2 3e+04 -4.4 1.7 5 10 773 778 773 778 0.90
10 15 0.0074 1.1e+02 3.7 10.8 1 11 784 794 784 806 0.89
11 15 6.9e-11 1e-06 29.3 14.0 1 19 811 829 811 829 0.98
12 15 1.1 1.6e+04 -3.3 1.0 6 10 858 862 858 863 0.90
13 15 2 3e+04 -5.0 7.1 10 19 876 886 865 886 0.80
14 15 0.00016 2.4 9.0 13.7 1 16 922 937 922 948 0.82
15 15 5.3e-06 0.08 13.7 13.6 1 19 954 973 954 973 0.96

Sequence Information

Coding Sequence
ATGGCAAGCTGGGACGGGTCCTACTATGGGCCCGAAGACCCAAATTTTTACAACGTAGGAAGAAACTGGAACTATTATCCCCAGAACGGGTCAAATCCTCAATCAAATACGTCAAATTTGGGCCAGGACAATTTGGCCAATACCTATATGCAGCAGGATCTGCAATTGGCTGGTAATCCGCAGTACAATAGACACCAAGCTTTCTTTGAAAACAATAGATCGCAGCCTAACTTACCGCCCTTCAAATGCAAGAGTGGAAATGTCGGGGATAATAAGCCTAGAAGGAAGAATTACCAGGGCAAAATGCCGTTTGTTAATCACCAGATAGACCCGAGCATAGTAGAAAATTCAAACCTACATGCGACCGCGGGTGAATTTATACCGAGCAGTTTTAAAGCGCTGCAGGAACCAGCGACTAGCTCTTTTTCTAGTAGTAGCAGTAGTAGACTCGAGGTAGAGAATTTCGAGCCTTTTACCCAGCAGTCTGAAAGCGCTGAGTTTTTACCTGAGGCTATAGCGTCGCCAAAGCCGTATTACTCAGATAATAGAAATAAACGGGAGAAAAAGGACAAGAAATACGATAATAAAAAGAACGATAATTACAAGCCTAGAGATTCTCAAGATAGTCAATACCAGCATACTAATCCGTATAAAAACTCAGTTAGGAATCAAGCCCCTGTGAAAAACCGTAAATTCCAGAACGATAGATACCCAAATACGAGACAGTATCCTGAAAATAGTAGAAATTATTCTGGAGATAAAGataacgagagaaaaaaatggccaTCTAATAgagacaattttgaaaatggttcTTCTCACCAAGGAGAAGAGGATGTGGCTCAAACTACTGATCCAAACGTTAACAAGTActataaaaattcagtttACGATCCGTCGCGTAATTCGAGACACGAAAATCCTAGGCAGTCTATCGGGGCTTCTAGGTATTATGGGGATCGTGGAAATGAGCCTAACCACTCTGGTCAGAATTCTGAATCGGAGCAAGCTCAAGCGACCGGTAAAAATGTGAGGAGATATTTTAACGAGGATCGCGGAGAGAGATATCGCGATAGAAGAGAGCGATATGGCGATAGATACGAGCCTGGAGctagagaaaagaaaacgaattaCTCCGATTACAATGGGTACAAGAATAATTATGAGAGGGAAGACAGAACTGAGCGAACCAGGGATAAGGAGAAGACAAAAGATAGAGATAATTCCAGAGATGTTAAGGATAAGGAGTTTGAAAATTGGCGTCAGAAAATTGGAGATGATGGAAAAGGAACTGGATTAAAACGACCAAACAATAAAAGGCATGAGAAAGATGACGATGCGAGCCAGAGAGAACGTCTCACCGATCAGCTGAACAGAGGTCAATTGGAGTGCTTGGTATGCTGCGATCTTGTTAGACAGCACGATGCGGTTTGGTCATGCTCAAACTGCTATCACGTTCTTCATCTAAAGTGCACTAAAAAATGGGCAAAATCCTCGCAAGCTGaaaatggATGGCGTTGTCCAGCGTGTCAAAATGTGACTTCAGCAATCCCAGAGGAGTATTATTGCTTTTGTGGTAATACGAGTAGTCCGGAATGGAATCGTCGTGACGTTGCACATTCGTGCGGTGACGTATGTGGTCGTCTCAGATCGAAAACCAACTGCATTCACAAATGTAATTTATTATGCCATCCCGGACCTTGCCCACCTTGCGTTGCAATGGTTACTAAATACTGCGGCTGCAGCAGAACTTCCCAGACATTGAAATGCAGCACTGGGACCCCTTTACTCTGTTCTTCGACTTGCGAAAAAATCTTAAACTGCGCCATTCATACTTGCGAACGGCAATGCCATCACGGCGACTGCGGGGATTGCGAAAAACTGGTTCATCAAGAATGCTACTGCGGAAAAGATAAACGTGATGTACCATGTGTGGCGGACGTTCCAGCAACCTACACTTGCGAATCTGTTTGTAATAAGCTATTAGAATGCGGAAATCACAACTGCAAAGATCTGTGCCATCCGGGACCCTGCGAACCTTGTGTTCTGAGACCAGAAGCAGTGTCTCATTGCTGTTGTGGACAAACTCCTTTAACCGAGCCAAGAACTAGCTGCACCGATGAAATTCCAGTCTGCGATAAGACGTGCTGTAAACGACTAAAATGCGGACAACCTAgTAACCCACATATGTGCAAAGTGAAATGTCACGTAGGAGAATGTCCCGAGTGCGAATTGACCACGAAAGTAAAATGCCGTTGTGGTAACATGGACAAGGAAATTCCATGCAAAGAACTAACGTCTAAAGCTGACGATGCACGCTGCCAGAAGCGATGCACAAAGAAACGGTCTTGTGGCAGGCACAAGTGTAATCAGATGTGCTGTATCGATATCGAACACATTTGTCCATTGCCTTGTACACATTCTCTCAGCTGCGGCAGACACAAGTGTGAACAAACTTGCCACAAAGGTAGATGCCAGCCCTGTTGGCGTAGCAGTTTTGAAGAACTTTATTGCGAATGTGGCGCAGCTGTGATCTATCCTCCGGTACCCTGTGGAACCAGACGTCCAGTGTGTGAGAGGCCTTGTTCTCGACAGCATGCATGTGATCATCAAGTACTACACAATTGTCACAGCGAGTCAATATGCCCGCCTTGTACAGTTCTGACCCAGAAATGGTGTTACGGTAATCACGAGCTTAGGAAAGCTGTTCCGTGTCATGTTAACGAAGTGTCCTGCGGACTGCCATGCAACAAGCCCTTGTCTTGTAAAAGACACAAATGTATTACCATCTGTCATCCTGGTCCGTGCGAAAAACCTGGCCAAGTTTGCGCCCAGCCTTGTACTATTGCCAGAGAATTGTGTGGACATATTTGTTCAGCGCCATGCCACGAGGGGAAATGTCCAGAATTACCGTGTAAAGAAATGGTCAAGGTGACTTGCCAATGTGGACACCGAACCATGAGTCGAGCCTGTGCAGAAAATTCTCGAGAGTTCCAGAGAATAGCCAGTGGAATATTGGCTAGTAAAATGGCAGAAATGCAGCTCGGTCATTCTGTAGATTTAGAAGATGTTTTAGGTCAAAGTGCGCGGAAGCAAAATCAGTTGAAAACTCTGGAATGTAACGAGGAATGTAAGATGATTGAAAGAAATCGAAGACTTGCACTAGGGCTGCAAATAGTTAATCCTGATCTGAGCGGAAAGCTAATGCCAAGGTACACTGATTTCATGAAACAATGGGGCAAAAAGGATCCAAACTTTTGTCAAATGGTGCATGACAGATTGACCGAACTGGTTCAGCTCGCCAAAATGTCTAAACAAAAGTCTAGAAGCTATTCATTTGAAAGTATGAACCGAGACAAGCGTCATTTCGTTCATGAATGTTGCGAGCACTTTGGATGTGAGAGTCAGGCTTACGATCAAGAACCGAAAAGAAATATTGTTGCTACCGCTGTGAAAGATAAGtGTTGGTTGCCAAGTTTGAGTTTACTCGAATTGTTACAAAGAGAAAGTGGCCAGCGAAAAGTACCAGGACCAATGTTAAATGCTGCAAAAGCTACGAGCTCTCTAAGAAATGTAGAAGTATTACCACTGCCGACTAAAAAGGGTCACAAGACCCAGCCTGCAACGGTGATTCCAAAATCACCGGAGCCTGAAATAGATTACTTTGATTACCAGGGTTGA
Protein Sequence
MASWDGSYYGPEDPNFYNVGRNWNYYPQNGSNPQSNTSNLGQDNLANTYMQQDLQLAGNPQYNRHQAFFENNRSQPNLPPFKCKSGNVGDNKPRRKNYQGKMPFVNHQIDPSIVENSNLHATAGEFIPSSFKALQEPATSSFSSSSSSRLEVENFEPFTQQSESAEFLPEAIASPKPYYSDNRNKREKKDKKYDNKKNDNYKPRDSQDSQYQHTNPYKNSVRNQAPVKNRKFQNDRYPNTRQYPENSRNYSGDKDNERKKWPSNRDNFENGSSHQGEEDVAQTTDPNVNKYYKNSVYDPSRNSRHENPRQSIGASRYYGDRGNEPNHSGQNSESEQAQATGKNVRRYFNEDRGERYRDRRERYGDRYEPGAREKKTNYSDYNGYKNNYEREDRTERTRDKEKTKDRDNSRDVKDKEFENWRQKIGDDGKGTGLKRPNNKRHEKDDDASQRERLTDQLNRGQLECLVCCDLVRQHDAVWSCSNCYHVLHLKCTKKWAKSSQAENGWRCPACQNVTSAIPEEYYCFCGNTSSPEWNRRDVAHSCGDVCGRLRSKTNCIHKCNLLCHPGPCPPCVAMVTKYCGCSRTSQTLKCSTGTPLLCSSTCEKILNCAIHTCERQCHHGDCGDCEKLVHQECYCGKDKRDVPCVADVPATYTCESVCNKLLECGNHNCKDLCHPGPCEPCVLRPEAVSHCCCGQTPLTEPRTSCTDEIPVCDKTCCKRLKCGQPSNPHMCKVKCHVGECPECELTTKVKCRCGNMDKEIPCKELTSKADDARCQKRCTKKRSCGRHKCNQMCCIDIEHICPLPCTHSLSCGRHKCEQTCHKGRCQPCWRSSFEELYCECGAAVIYPPVPCGTRRPVCERPCSRQHACDHQVLHNCHSESICPPCTVLTQKWCYGNHELRKAVPCHVNEVSCGLPCNKPLSCKRHKCITICHPGPCEKPGQVCAQPCTIARELCGHICSAPCHEGKCPELPCKEMVKVTCQCGHRTMSRACAENSREFQRIASGILASKMAEMQLGHSVDLEDVLGQSARKQNQLKTLECNEECKMIERNRRLALGLQIVNPDLSGKLMPRYTDFMKQWGKKDPNFCQMVHDRLTELVQLAKMSKQKSRSYSFESMNRDKRHFVHECCEHFGCESQAYDQEPKRNIVATAVKDKCWLPSLSLLELLQRESGQRKVPGPMLNAAKATSSLRNVEVLPLPTKKGHKTQPATVIPKSPEPEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01413836;
90% Identity
-
80% Identity
-