Basic Information

Insect: Ametastegia equiseti
Gene Symbol: -
Assembly: GCA_963989295.1
Location: OZ022395.1:6232897-6236594[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.3 6.2e+02 1.9 0.6 2 12 522 532 521 541 0.85

2 14 2.2e-08 2.6e-06 28.3 2.3 1 23 551 573 551 573 0.98

3 14 2.3e-05 0.0027 18.8 3.8 1 23 581 604 581 604 0.95

4 14 0.00098 0.12 13.6 0.1 1 23 616 639 616 639 0.94

5 14 0.0025 0.29 12.4 2.9 1 23 666 689 666 689 0.96

6 14 0.00066 0.078 14.2 2.1 1 23 695 717 695 717 0.96

7 14 0.017 2 9.7 3.2 1 23 732 754 732 754 0.94

8 14 0.49 58 5.1 0.6 1 23 760 783 760 783 0.92

9 14 4.1e-06 0.00049 21.1 3.6 1 23 797 819 797 819 0.98

10 14 1.4e-06 0.00017 22.6 0.6 1 23 825 847 825 847 0.99

11 14 0.0078 0.92 10.8 0.3 1 23 853 875 853 875 0.97

12 14 0.007 0.82 11.0 3.7 1 23 881 903 881 903 0.98

13 14 2.1e-07 2.5e-05 25.2 1.2 1 23 909 931 909 931 0.99

14 14 5.5e-05 0.0065 17.6 1.0 1 23 937 960 937 960 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.3	6.2e+02	1.9	0.6	2	12	522	532	521	541	0.85
2	14	2.2e-08	2.6e-06	28.3	2.3	1	23	551	573	551	573	0.98
3	14	2.3e-05	0.0027	18.8	3.8	1	23	581	604	581	604	0.95
4	14	0.00098	0.12	13.6	0.1	1	23	616	639	616	639	0.94
5	14	0.0025	0.29	12.4	2.9	1	23	666	689	666	689	0.96
6	14	0.00066	0.078	14.2	2.1	1	23	695	717	695	717	0.96
7	14	0.017	2	9.7	3.2	1	23	732	754	732	754	0.94
8	14	0.49	58	5.1	0.6	1	23	760	783	760	783	0.92
9	14	4.1e-06	0.00049	21.1	3.6	1	23	797	819	797	819	0.98
10	14	1.4e-06	0.00017	22.6	0.6	1	23	825	847	825	847	0.99
11	14	0.0078	0.92	10.8	0.3	1	23	853	875	853	875	0.97
12	14	0.007	0.82	11.0	3.7	1	23	881	903	881	903	0.98
13	14	2.1e-07	2.5e-05	25.2	1.2	1	23	909	931	909	931	0.99
14	14	5.5e-05	0.0065	17.6	1.0	1	23	937	960	937	960	0.96

Sequence Information

Coding Sequence: ATGCTGAAGCTCGTTCTGCAGACCCAGGAGGGTCAGCAGATAGAAGTAACCGTTAGCACAGATGATACGTTCGAAGATTTAAAGAGGCAATACGAAAGCCCTGAGAACCCAGGGCTACCTGAATTGCTCAAACATTTGATAACTAACGGAATGTACGTGGACGAGAAAACAAAAGTGTTTGATTACGTGACAACCAGCAgTTCGACGGAATGGCTGGTCGAAGAATCTCTCGAAGATATTCCTGGCCTCGAAACAGTCGAGACTCTACAAACTATCGTCAAAGAAACTACACCGCTGAAAGTATGCTgcgttgaaaattgttcaaacacGGAACTAAACGCACCTGATAAAGTGTTCTTTCCTTTACCCAGCGACAAAGATAGATTATCATCCTGGCTAACGGGAATCGGAAAACCGGAGCTTTTCGATGTATCAGTTGATTTGGAGTCGAATATCGAAGAAGATCAGCACTTTGTTTGCGCGGATCATTTTACACCGCATCAATTCTTGAAGGGAACTAACCAGGTGCTCAAAAGACGAGCTTGTCCTTCTCTGGTGGCATTTGCCGTCGAGGATGAAACTAATTCTTCGACAAACGAACAAGATCCTTCATTTGCGAAACCGGAATTGAATGACAACTCGACTTTTGTGCAAGTCacggaagaaaacaaagatCTAAATGTCCAAGATACTGTGGATCCTGCTTGTGTCTTGGAATTGTTTGATGCTTCGAAGGAAGTCAATCATCCTGGAGTTTTGTGCCGTTTGTGTGGCGAACGAGCCGTCAGCCCTGTTTATCTGTTTTCAACTGAGGATTGTAGCGCAGAGTTTTCCGTTGcagataaaataaatttgtgtTTACCTATAACgGTAAACGCCAAAGACCCGCTGCCGAAACAAGTGTGCGAAAACTGTCTGGAGAAACTTGAGACGTGCCATAAACTTGCGAGAACTTGTCTTGAGACGGAAGACAAGTTAAAAGCAATGTTCGAGATGAAGAAATTTCTTGTGAAAGACGAAGAGGAGAAGCATTGTCCGTTATGCGTATCTGGGAACATGGGAATTGTAACTAAAAGTGGAATTTATAGAAAAGACAGAGCGGAAagaattccagaaattttgagaaactcCAGTGCTAGAACGAGACAAGTTTCTCCTTCAAGGAATGCACACAGTAAATTAGGTACTTGGAGTTCTGTGGACAAAGAGCCTCTTCAGGaaCACAACGATATTATGTCTACCGCAATTGTAGAGAAATCATTTGAAGATGAAGGAATTCCTATCGATTCACCACCGTATTTATTACCAGGTGAATTATCGTGCTCAATTTGTTGTCGGAAAGAGAACAGCGTGGAAAGTCTGACCCAGCATGCGAAAGAGCACGACGGCTACCCATGCACGATATGCAAGGAcgtaaatttcaaaactataaACGAACAGCAACTTCACTTCCTGAGACACGGGGTCAACGAAGGATACTGCGAAATATGTTCTGTGGAATGGACAGACGTCAAGGACGCAGCGGAGCACATAAAAATCTGTAAACCAGAGTTTTGGAACATAGAATGCGCTCAGTGTGGAGAAAAATTTCCTCACGTTCAAGCGGGGAATCACCACGTGTGCCAAGTATCGGAAACTGAAGAAGAATGgtTCGAATGCGATCAATGTGGGAAAAAGTTTTCGCATAAAAGCAACTTGAACGCGCACATGAAGGCGCACGAGAAGAGAGAAACGATATTTTACAAATGCTCGTTTTGCAACAAGCAATTCACCCGCAAAGGAAGTCTACATAAGCACATTTCAGCCCTCCATGCCGACACGGAATCAACCGCAAGCCCGAAATGTTACAAATGCAGGAAATGTGACGAAGCCTTTGCAACCTCAGCCAGCGCCGAAGCTCATATAACAGAGAAACACTTCAGCCAATTGATAATGGCAGATATGAATTTTATGAGCGATCAATTCACAGCTGAGGAAATGAACTTAGCTCGTGTTTATATTTGCGAATATTGCGAACGCTGCTATACGATTCCCAGCTCGTTGCATGATCACAGACAAAATGAGCACCGAGATAATTCCGACTATCAATGTAACGTTTGTAACAATTCGTTTGAGACTTACAAGTCGCTATTGCGTCACAAAACGCTCCATGTCAAGGAAAATGAATTAGAAGATTTGGGCGTCAAACAATACTATCTTTGTAATTATTGCAACAAAACGTTTCTACATTACGGGACATTGACCGTCCACACTTCGCAGCATCAAAAGCCGCTTCCCTATTTGTGCAGGCTTTGCAACTTCCAGTTTGCTACGTACAAAGAAGTAGCTGAGCACAGAAAAGCAACGCATCCCTACCAATCCGTGCTTCACGAGAGGCCTAACAACTTGTACCATTGTCAATACTGCGAAAAAAGCTTCACCCACGAAGTGGCGCTGATTAAACATATAAGGATGCACACTGGAGAAAGACCGTACAAATGTTCCGTGTGTGGAAAGGGATTTTCACAAACGTCTGGACTCTACACGCATCTCAAAGTTCACTCGGACTTGAGGCCTTACGCCTGTCCGCAATGTCCTCAAACGTTTAAGATCAAAGGAGACAGAGACAATCATGTGAAAAAACATTCCGGCGATCGACCTTACAAGTGCGATTTTTGCGAAAAGGCATTTATGACGCAGCACGTCTACAGCCAACATAGAAAAATTCACACAAACGAAAGACCGTACAAGTGCGATATCTGCGGAGAAGCTTTCAGAAGATCACACGTTCTTACTGTCCACATGCGTCGTCACACTGGGGAAAAACCACACGTTTGTGATATGTGCCCTAAGGCTTATAGACAACGAGGCGATTTGTTGAAACATAAGAAAATACAGCACGGCATTGGGTTAAACAATACAAACGGCGTTGTGAGCAATTCTAGCACCGGTCTCGCACCCTCTCGTGATACATCAAGTGCCGAATCTACGACGGTGTTCTTACCCATTTGA
Protein Sequence: MLKLVLQTQEGQQIEVTVSTDDTFEDLKRQYESPENPGLPELLKHLITNGMYVDEKTKVFDYVTTSSSTEWLVEESLEDIPGLETVETLQTIVKETTPLKVCCVENCSNTELNAPDKVFFPLPSDKDRLSSWLTGIGKPELFDVSVDLESNIEEDQHFVCADHFTPHQFLKGTNQVLKRRACPSLVAFAVEDETNSSTNEQDPSFAKPELNDNSTFVQVTEENKDLNVQDTVDPACVLELFDASKEVNHPGVLCRLCGERAVSPVYLFSTEDCSAEFSVADKINLCLPITVNAKDPLPKQVCENCLEKLETCHKLARTCLETEDKLKAMFEMKKFLVKDEEEKHCPLCVSGNMGIVTKSGIYRKDRAERIPEILRNSSARTRQVSPSRNAHSKLGTWSSVDKEPLQEHNDIMSTAIVEKSFEDEGIPIDSPPYLLPGELSCSICCRKENSVESLTQHAKEHDGYPCTICKDVNFKTINEQQLHFLRHGVNEGYCEICSVEWTDVKDAAEHIKICKPEFWNIECAQCGEKFPHVQAGNHHVCQVSETEEEWFECDQCGKKFSHKSNLNAHMKAHEKRETIFYKCSFCNKQFTRKGSLHKHISALHADTESTASPKCYKCRKCDEAFATSASAEAHITEKHFSQLIMADMNFMSDQFTAEEMNLARVYICEYCERCYTIPSSLHDHRQNEHRDNSDYQCNVCNNSFETYKSLLRHKTLHVKENELEDLGVKQYYLCNYCNKTFLHYGTLTVHTSQHQKPLPYLCRLCNFQFATYKEVAEHRKATHPYQSVLHERPNNLYHCQYCEKSFTHEVALIKHIRMHTGERPYKCSVCGKGFSQTSGLYTHLKVHSDLRPYACPQCPQTFKIKGDRDNHVKKHSGDRPYKCDFCEKAFMTQHVYSQHRKIHTNERPYKCDICGEAFRRSHVLTVHMRRHTGEKPHVCDMCPKAYRQRGDLLKHKKIQHGIGLNNTNGVVSNSSTGLAPSRDTSSAESTTVFLPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01200401;
90% Identity: -
80% Identity: -