Aequ017461.1
Basic Information
- Insect
- Ametastegia equiseti
- Gene Symbol
- ZFX
- Assembly
- GCA_963989295.1
- Location
- OZ022396.1:11974698-11979346[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.8 2.2e+02 3.3 0.1 3 23 14 34 13 34 0.94 2 15 1.2 1.4e+02 3.9 2.6 1 23 885 908 885 908 0.83 3 15 0.00021 0.024 15.8 1.0 2 23 986 1008 985 1008 0.96 4 15 0.016 1.9 9.8 0.3 2 23 1021 1042 1021 1042 0.98 5 15 2e-05 0.0023 19.0 2.3 2 23 1045 1066 1044 1066 0.97 6 15 0.014 1.6 10.0 0.3 1 23 1072 1094 1072 1094 0.95 7 15 2.7e-05 0.0032 18.5 4.5 2 23 1101 1122 1100 1123 0.95 8 15 0.12 14 7.1 3.7 5 23 1136 1154 1135 1154 0.97 9 15 2.5e-05 0.0029 18.7 1.5 3 23 1161 1182 1160 1182 0.97 10 15 0.011 1.3 10.3 0.3 2 23 1198 1218 1197 1218 0.97 11 15 7.4e-05 0.0088 17.2 0.7 1 20 1224 1243 1224 1246 0.92 12 15 9.3e-05 0.011 16.9 2.7 1 23 1254 1276 1254 1276 0.99 13 15 0.0026 0.3 12.3 3.2 1 23 1282 1304 1282 1304 0.97 14 15 2.6e-06 0.00031 21.7 3.9 1 23 1310 1332 1310 1332 0.99 15 15 0.00034 0.039 15.1 7.2 1 23 1338 1360 1338 1361 0.96
Sequence Information
- Coding Sequence
- ATGGATATTGGTACAGGTATGAACACCGGGGCGGTTGCCTGTCCGGTTTGTACTTTATATCTAAGAGAAGGTATAAGCCTCCAAAAACACTTGGACACTCACCCAAAAGAGCAGGTAATCGAGGCTCTAATAAAAGCAAGCTCATCTCCCTCTCCGCCACAGCACATTTCTCAACCTGCTCAAAGTCCGATCCAAACAACACCAGCTAACCCAGTTCCATCTCAATCTCCGTACCCCGTAGGACCGGTATTCGAATGTCCGCCTGTGGCTTCGATGATGTCCCCGCAATTTGCTTCCTTTAGTTATCAGCAGTTTGTTAATAATGGGACAATGATGATACCGCAGTACGCCATGGCGCCACAGGCTAATCAGATGATGCAAATGCTTTACAATCCTTACGGCATGTATCAGCAGCAGCAAATACCTGCGGTTCAAATGATTGCGCCCATATCCAATGTGCCAACTGCTCAGAGAACTAGACCCATGGTTTCCGTGGCTAGCGAAGCCAACGGTAGGAGTAACGTCACTCCTGCTATAGGCAGCGGGGATTTGGAGCCTAAGCAAATTTTGCCAGAAATAGAGGCGGAGGTTGAGGCTGAACAGCTTCTACCTGATATAGAGATCGAACCAGCTACGAGCACCAATCAACACGAGAGTAATCAGGACGAAAGGAATCAACCAGAACATCAAACGCAACAGATACAGCAAGAGTCTCTGAGTCAGGATAGAATCGAGTACCAAAACATTGTGCATAATTTGCCTGCTAATGAGGATGGGGCTGTTGTTGATAGTGATAAGACTGACATTGATAACGTACTGCCAGAAGACGAAGAACTGGAGTCTACAAACCAGGCTCAAATTGTTGTGCCCATTCAGCATGAACAGACTCAGACTCAACAGGGAGAGGAATTTGGACAAGAATTTGATGCTTGTGTTATCAAGGAACGGGAAACTCAATCCGTGAATGATGTAGAGGTGGAGGTTGGAGCGGATGACAAAATGGATgacgataaagaagaagatgtAGTAAACAAAGACTCTATCGTGGAGGAAAATATGGTTGTTGAGAGACCAAAGAATTCTGAAGAACAGCCTGAGGTCGAGCAGCTTGAACGCCTTTTGATCACCATTATGGAGACGGAGTTTAATgttaatcatttgaaaaacaaagacAGGAAGCGCAACGAGGAGGAAGAGAAGCCGGAAAAACGATCTGATGTAGAAGTTTCTGTGGGCGATAGGGAGACCAGCGTCATTCAAGAAACTTCAGCTACAAGCTTGGACTTGCAGAGAAACAGCATGAAGGCTTCAGAGACTGAAGAAGTTGGGAGATCCTCCGAAACTGACAAAGAGAACAACGAGGAAAATGCAAAATTGGCAGAATTAGAAGTACAGGAAAGTTATGAGCAGAAAACAACTGCTTCCCAGtttgtatatagttataaaaATAGCATATCTGCTCCAGCCTCGCCAGCTATGAGGAGAAATTCAAATCGCCAAAGGACTTATTCTGTGCGATCTGAAATGGGGTCTAACGAAAATCTCAGCTCTTATCCGGTTGGTTTTGAGGCGACGACGCTTCTcgatgacgaagaagaagatgcgAATGAAAAACGCGAGACGGTTGACAATTTTGATGAGGAAGATATGGAGATTGAAGAAATCACCAGTCCCCATACTCCGTTTACAAAACATAACGAGAATACTGAGTGCGTCAGGTCTCATACACCTTTGTCGACTATTAGTGGAATTTCTGGACTTAGAGTTAGGACTGATCTCAGCAAACCGTGTTCCCCTGCATCGGCTCATTCCTTTCATCACATGGACACTAACAGCCTTTGTGCAGAAGATGACGGAGAGGAGATACTCGATCCAGAGACTGAAAAAGATCCTATAGACTGTTCACAGCTACAGAGAGAAGCGGAGTTGATTGAGAACCTGAAGAATATCTCGCAAAAGCTACAGCCCAATCACGTTTATCATCAGTCTGTGATTACGGAAAATCTTGCCTCGTTTTCTATCGGTCAACACTCTCAAAAACCTATGAATAGTCACGAGAGTTACGAATCAACGACTTGCCAGCATGCCGACAATCTTTTGGACCTTTCAGAACCCTCTGAGCCAACTACTAGCACAGATTCAAAGAACTTCCAATCCGTTAAATCAATTCTACAAAAACCCTCTACCGAGCTGTTGAATATCAACGAGGATGCACACCCTGGTCCTATGAATGTACTCGAATTTGACGGACTACAGATTCTTGTTCCGAGCACATTCATCAGCGAATCTTCACAAAAAGCTGTCAGCGCTACTAGTCGACAATCAATGGCAAGCAGCGAGGGCGGGGCTGAAGCTGACGAGGAAATTAAAAGCGTCAATATGCGGGCGGATGAGATTATGCCTCCTAGAGGCGAACTTTCTGAACAGGAAAGTAACGGGTGCCATGAGCCTTCCGCTTGGCAGTTGTACATGGGTCAGGAGTCGTCTCGGATGTCTACATCTTACGACTTGATGGCACGTGAGAGCTGGGAGGAATCTGAAGGATCAGACAACGAGATTGGAGGCCCACTATTGGACAGTCGTTCATTGGCGACGCACTTCACTTCTAGCTTGTTTCTTGACCGCGATAGAAAGACTCCTACAAAGCGATCGTTCAAGTGCCCTCATTGTTCAGAAATCTTTGATTGTCCAAAGGAACGCAGGGTGCACACCGGCACTGTCCACAAAGAAGCTGGTCCTAGCAGTAGCAGGGATCCTATGGAACAGCCTGAAGTAAAAGACATAAAGTTGTTGGAAGGGCGAATGAACGTTTTCGACGATCTCTTTGTTCCTGGGTTGCACGTGCAGCAGCCTCTTCTGCATCAGTTGCAGCCTGTGCATCATCAACCTGATCTTACCAAGTTGGAAGTGGataggaaaattgaaaaccttATTGTTCCAACGTCGATTGAGATCTCGTGTTCAATTTGTGGTCAACTATTTAGCAGCGAAAAATCACTGCAGATACATCATAGGAGGGTTCATGTTTCCGAAAGTAATAAACGCGTCAGGGAGAGCGCAAAATGTCAAACTTGTAACGAAGAATTTCCATCGGTTGTTTTGTATAATacacatttgaaaattcatccgTTAGAATGCGGGCAATGcgggaaatatttttacagAAAACAGAACTTCAAATTACACATGAAACGACATCTTGGTATCAAGCCTTTCCCTTGCACCGTATGCGATAAAGCTTTCCTTACCAAACAGAAACTTGACGAACATACAAACGGACATACTGGAAACGCCCCGGTCAAGTGCAATTTGTGTAACGAAACATTTAGACGTTATTCAAACTTGACTCAACACAAAAATCGACACCATCTTAATATAAAGAAGAAACTCAAGGACTACATTTGTCATTGCGGCGAAGTATTTcacacaaagaaaaaattggctTGGCATAAAGAAACTCACGACGAAAAACCTAAGGCTTGCACTTACTGTAACGAGAGGTTTATTCACATGGCTAGTTTGACTCGGCACATGAGAAGAGCCCACAATCGAAGATTTGTTCCAGACGCTCAGAGGGAAAACGAAAATGTCGAGTGTCCCATTTgcaaatgtatttatttacgaTCATCTTTGGCTGTTCACATGCGAGTTCACAACGGAGAGAGACCTTACGAGTGCCAAGTTTGTTCGAAGGCCTTCAGCACAAAATGGAATCTACAGCTGCACAAATGGACTCATGCGGCTCGCAGTACCAAACCTTTTAAATGCAATCAATGTAGCGCTGCGTTTTATCGTCACAGCGATTACACAGCTCACATGAATTCCCATAGAAACGTTCGACCTTATACATGTAATTATTGCGGGGCACAATTCATCAGGAAGTATAACTGTCTACGACACGTCAAAGAAcacgaagaaaataaatcttaCACTTGCGATATTTGCAATAAAACGTTTCATCGATCTTATTACCTCAAAGAACATTTGCGAGTACATTCGGGAGCCAGACCCTACACATGTCATATTTGTGGCAAGTCTAGTAGTACCAAGTCAAATCATAATAAACACGTAAGAATTCATCACGCTAGGGAACCTGTGAATACAGAAAACTAA
- Protein Sequence
- MDIGTGMNTGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIKASSSPSPPQHISQPAQSPIQTTPANPVPSQSPYPVGPVFECPPVASMMSPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPAVQMIAPISNVPTAQRTRPMVSVASEANGRSNVTPAIGSGDLEPKQILPEIEAEVEAEQLLPDIEIEPATSTNQHESNQDERNQPEHQTQQIQQESLSQDRIEYQNIVHNLPANEDGAVVDSDKTDIDNVLPEDEELESTNQAQIVVPIQHEQTQTQQGEEFGQEFDACVIKERETQSVNDVEVEVGADDKMDDDKEEDVVNKDSIVEENMVVERPKNSEEQPEVEQLERLLITIMETEFNVNHLKNKDRKRNEEEEKPEKRSDVEVSVGDRETSVIQETSATSLDLQRNSMKASETEEVGRSSETDKENNEENAKLAELEVQESYEQKTTASQFVYSYKNSISAPASPAMRRNSNRQRTYSVRSEMGSNENLSSYPVGFEATTLLDDEEEDANEKRETVDNFDEEDMEIEEITSPHTPFTKHNENTECVRSHTPLSTISGISGLRVRTDLSKPCSPASAHSFHHMDTNSLCAEDDGEEILDPETEKDPIDCSQLQREAELIENLKNISQKLQPNHVYHQSVITENLASFSIGQHSQKPMNSHESYESTTCQHADNLLDLSEPSEPTTSTDSKNFQSVKSILQKPSTELLNINEDAHPGPMNVLEFDGLQILVPSTFISESSQKAVSATSRQSMASSEGGAEADEEIKSVNMRADEIMPPRGELSEQESNGCHEPSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEIGGPLLDSRSLATHFTSSLFLDRDRKTPTKRSFKCPHCSEIFDCPKERRVHTGTVHKEAGPSSSRDPMEQPEVKDIKLLEGRMNVFDDLFVPGLHVQQPLLHQLQPVHHQPDLTKLEVDRKIENLIVPTSIEISCSICGQLFSSEKSLQIHHRRVHVSESNKRVRESAKCQTCNEEFPSVVLYNTHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKSYTCDICNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00939825;
- 90% Identity
- -
- 80% Identity
- -