Basic Information

Insect: Ametastegia equiseti
Gene Symbol: -
Assembly: GCA_963989295.1
Location: OZ022395.1:14976917-14978674[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00023 0.027 15.6 0.2 1 23 66 88 66 88 0.97

2 15 0.66 78 4.7 6.2 1 23 132 155 132 155 0.92

3 15 0.00042 0.049 14.8 3.3 1 20 167 186 167 189 0.94

4 15 0.05 5.9 8.3 1.7 1 23 195 218 195 218 0.95

5 15 0.004 0.47 11.7 0.8 1 23 239 261 239 261 0.97

6 15 0.38 45 5.5 3.6 2 23 272 294 271 294 0.94

7 15 4 4.7e+02 2.3 10.1 2 23 301 322 300 322 0.95

8 15 0.017 2 9.7 3.1 1 23 331 354 331 354 0.97

9 15 0.061 7.2 8.0 1.9 1 23 371 394 371 394 0.95

10 15 1.4e-06 0.00016 22.6 1.3 1 23 400 423 400 423 0.96

11 15 0.014 1.6 10.0 0.8 3 23 430 451 428 451 0.94

12 15 0.00018 0.021 16.0 0.4 1 23 456 479 456 479 0.97

13 15 2e-08 2.3e-06 28.4 0.4 2 23 486 507 485 507 0.97

14 15 1.5e-07 1.7e-05 25.7 0.2 1 23 513 535 513 535 0.97

15 15 1.8e-07 2.1e-05 25.4 0.3 1 23 541 563 541 563 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00023	0.027	15.6	0.2	1	23	66	88	66	88	0.97
2	15	0.66	78	4.7	6.2	1	23	132	155	132	155	0.92
3	15	0.00042	0.049	14.8	3.3	1	20	167	186	167	189	0.94
4	15	0.05	5.9	8.3	1.7	1	23	195	218	195	218	0.95
5	15	0.004	0.47	11.7	0.8	1	23	239	261	239	261	0.97
6	15	0.38	45	5.5	3.6	2	23	272	294	271	294	0.94
7	15	4	4.7e+02	2.3	10.1	2	23	301	322	300	322	0.95
8	15	0.017	2	9.7	3.1	1	23	331	354	331	354	0.97
9	15	0.061	7.2	8.0	1.9	1	23	371	394	371	394	0.95
10	15	1.4e-06	0.00016	22.6	1.3	1	23	400	423	400	423	0.96
11	15	0.014	1.6	10.0	0.8	3	23	430	451	428	451	0.94
12	15	0.00018	0.021	16.0	0.4	1	23	456	479	456	479	0.97
13	15	2e-08	2.3e-06	28.4	0.4	2	23	486	507	485	507	0.97
14	15	1.5e-07	1.7e-05	25.7	0.2	1	23	513	535	513	535	0.97
15	15	1.8e-07	2.1e-05	25.4	0.3	1	23	541	563	541	563	0.98

Sequence Information

Coding Sequence: ATGGAACTGTGGCAAAGATCAAACCCCAAAGGGAGGCCCTCGTATTCCCTGGTTCCAGTTACTCGCCGAAACGCAAATGGCAGAAGAAATTCCAAGGACGAATTGATTCCAGCTAATGAAATCAAAGTCGAAATATGCGAGGAAACCAGGTGTCAAGAGTCTCTGGCCCACCTCTGCCAAGTTACGATCGAGTGTTTTCCCTGCGACAAATGCGGGATTAAATTTCCAGTCGAAAATATGCTGAACAGGCACAAGATTAGGCACTCTAGAAAATACGTGGCTTGGAAAAGGCTGCCAGCTAAAAACTGTACGAATTGCGACGGCAAATTTGGGAAGAAAAATCGTCGCAATTCTCACATATGGAGGCACAGAGTAGAGGAGAAAAACGTTCTGTATCTTTGCAGCGTCTGCGATTTCAAATGTCACAAAAGAACAACGCTCGCATCTCACCTCAAGAGAAAACATAAGACACGGGACTCAAAAGATCGGTCTAAACTGTACAGCTGTGGGACTTGCGATTATACGTGTTCTAGGAAAGACCATCTCAATGCCCACGTATGGCGACACAGGAGGGATCCCACTTTTTCTTGCAAGATCTGCAagtttgagtcaaaaaaacGAACTACACTAGCCTCTCACGTTGCCAAGAAACACAAGCGTGCCAAAGCAAACAAGAAGGAAGAAGTAGAGGTGGAGAAAAAAGCCGAGGAAGAATATCGCTGCGATACTTGCGACTACAAGACTCTTAAGAAAGAAAATCTCCAAGTTCATGTGAGAGGGCACAAGGAGATATCGGAGGAAAGTTTTTCACTGTCTTGTACCTCGTGCGATTTTAAATGTAAAAAACGCGGGACGCTCGCCTCCCATGTTACAAGAAAGCACAAAGTGGCCGAAGAGTGCAAATGCAATTTGTGCGACTTCAAGTGCTTCAAAAAAAGCACCATGTACTCCCATAAACGAAGGCACAGGGCTGAGAGCGAGGGAAAAGTCTATAACTGCAACGAATGCAGCtttaaaactataaaaaaGACTTCCCTCTACTCTCACATAAAGAGGAAACATAAGTTAGTAGGAAAGACTGGCTCGGGTCTGGACCAAGTGACGGAATATTTCTACTGCAGCCAGTGCgagtacaaaaataaaaacaagtaCGAGCTGAAGGTACACGTCGCCAGAAAACACACagacgatttcaaattctcatGCGAGACCTGCGGCAAGAAGTTTAAGGTCAAAGGAGACTTGACCAATCATATAAGGTTCAATCACAAAGAGGGACCGGTGATTTGTGACGTATGCGGCAAGACTTGTCTAAACAGCAATTCCCTCTACGTTCATCAGAAGTTTGCTCACTACAAGGCAAAGTACGAGTGTAGAATCTGCAAAAGGCGGCTAGTTACTCAGGAGAATTTGGACGAGCATATGCTCAGGCAACACGAGAAAAGGGAAAACGTTGTTTGCGAGGAATGCGGGAAGACGTTTTCCAGGAACAGTAGGCTCAAAGTTCATATGAGAATTCACACCGGGGACAAACCCTACGCTTGCAACATATGCGGAAAGTCTTTTGCCAGGAGGACAGCCCTCAAACAACATTTGCTAATACACACAGGCATGAGACCTTACGTGTGCGACATTTGCGGGAAATCTTTCACTCAGAAACCCGGACTCATCAGCCATCGGAAATCTCATCCAGGATCTCATCCCCCCCTGCCTAGGGTCCTCATCGATCACATACTCAACGACGTCATGAACAACTGA
Protein Sequence: MELWQRSNPKGRPSYSLVPVTRRNANGRRNSKDELIPANEIKVEICEETRCQESLAHLCQVTIECFPCDKCGIKFPVENMLNRHKIRHSRKYVAWKRLPAKNCTNCDGKFGKKNRRNSHIWRHRVEEKNVLYLCSVCDFKCHKRTTLASHLKRKHKTRDSKDRSKLYSCGTCDYTCSRKDHLNAHVWRHRRDPTFSCKICKFESKKRTTLASHVAKKHKRAKANKKEEVEVEKKAEEEYRCDTCDYKTLKKENLQVHVRGHKEISEESFSLSCTSCDFKCKKRGTLASHVTRKHKVAEECKCNLCDFKCFKKSTMYSHKRRHRAESEGKVYNCNECSFKTIKKTSLYSHIKRKHKLVGKTGSGLDQVTEYFYCSQCEYKNKNKYELKVHVARKHTDDFKFSCETCGKKFKVKGDLTNHIRFNHKEGPVICDVCGKTCLNSNSLYVHQKFAHYKAKYECRICKRRLVTQENLDEHMLRQHEKRENVVCEECGKTFSRNSRLKVHMRIHTGDKPYACNICGKSFARRTALKQHLLIHTGMRPYVCDICGKSFTQKPGLISHRKSHPGSHPPLPRVLIDHILNDVMNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00938952;
90% Identity: -
80% Identity: -