Basic Information

Insect: Ametastegia equiseti
Gene Symbol: -
Assembly: GCA_963989295.1
Location: OZ022390.1:14483338-14486837[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.021 2.5 9.4 0.3 3 21 8 27 6 28 0.85

2 14 1.1 1.2e+02 4.1 0.0 2 20 34 52 33 54 0.90

3 14 0.57 66 5.0 0.3 1 12 225 236 225 245 0.89

4 14 0.044 5.1 8.5 3.2 1 23 354 376 354 376 0.97

5 14 1e-05 0.0012 19.9 0.4 2 23 380 401 379 401 0.98

6 14 8.9e-05 0.01 16.9 2.9 1 23 412 434 412 434 0.98

7 14 0.0086 1 10.7 0.1 1 23 453 474 453 474 0.90

8 14 0.00069 0.081 14.1 0.1 2 23 480 501 479 501 0.95

9 14 6.2e-05 0.0072 17.4 3.7 1 23 527 549 527 549 0.99

10 14 2.1e-06 0.00025 22.0 3.7 1 23 555 577 555 577 0.96

11 14 0.00013 0.015 16.4 4.4 1 23 583 605 583 605 0.98

12 14 1.5e-06 0.00018 22.5 0.8 1 23 611 633 611 633 0.98

13 14 9.5e-05 0.011 16.8 0.2 1 23 637 659 637 659 0.99

14 14 0.00041 0.048 14.8 0.2 1 23 667 689 667 689 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.021	2.5	9.4	0.3	3	21	8	27	6	28	0.85
2	14	1.1	1.2e+02	4.1	0.0	2	20	34	52	33	54	0.90
3	14	0.57	66	5.0	0.3	1	12	225	236	225	245	0.89
4	14	0.044	5.1	8.5	3.2	1	23	354	376	354	376	0.97
5	14	1e-05	0.0012	19.9	0.4	2	23	380	401	379	401	0.98
6	14	8.9e-05	0.01	16.9	2.9	1	23	412	434	412	434	0.98
7	14	0.0086	1	10.7	0.1	1	23	453	474	453	474	0.90
8	14	0.00069	0.081	14.1	0.1	2	23	480	501	479	501	0.95
9	14	6.2e-05	0.0072	17.4	3.7	1	23	527	549	527	549	0.99
10	14	2.1e-06	0.00025	22.0	3.7	1	23	555	577	555	577	0.96
11	14	0.00013	0.015	16.4	4.4	1	23	583	605	583	605	0.98
12	14	1.5e-06	0.00018	22.5	0.8	1	23	611	633	611	633	0.98
13	14	9.5e-05	0.011	16.8	0.2	1	23	637	659	637	659	0.99
14	14	0.00041	0.048	14.8	0.2	1	23	667	689	667	689	0.97

Sequence Information

Coding Sequence: ATGGGATCGTTGAGTCTGATGTGTCCGATGTGCTGTGGGGAAACATTCAACAATCCACAATCCCTAAAGTACCATTTATTAAGTATAACGGACAATTTGTACTGTCCGAGTTGTTCTGAACGCTTCGACTCCGTCTTAGCGTTGGTTCAGCATTTGGATCGTTGCGGTCAGTCTCCAGAGCCAGAAACAGAAGTTTTGATGGAAGCAAACGTTGAACAAATTAACGAGAGCTTCCTGGCCACTGTCAATCATGGAGACATCATGATCGTCGGAGAACCACGTTCTATACAAGTTGGTGATAACGGAGAGATCAATGTGGTGGAAGAGCTGGATGTTGGGGAAAGAGAGTCCAACAGGGTTGAATCTGTTTTAAAGGATGACAGAGAATCTCCGTCTCTAGTCAATGAGTCTAAAAGAAAATCTCCAACCCCTGAGCCATTGGTAGAACTGAGGAGAGTTAACTCAGACACTCCAGTGACTGATAAAGATATCATCACTATTCTGCCTGCCGATTCTGAACTTCTCGATAACGAAGATAGCAATTTGATGAGCGATACTCATACTCTTATAGAAGACGTCGACGACGTTGAGGATATGAACGACTCTGGAATTCTTCAAGTGAAGCAAGAACTCTGTGAGGTAAAACTCGAAGAGTTAGAGGCTGACGCATTATACAGCTGTAGTAGTTGTGGTATGAGTTTCAACTCGGTCTTGGAACACATCAAGGAATTTCACGATGGTCAAGAGGTAGTGTTAGAAATGGCGGAGCAACAGTTGGACGACCTACCGACCCCAGCTTCGATAACACCACCCGAAGAGCCGACATCTGTAATAGCGAATCGGCAGCGTCAAATGATGAACACTTTAAGAACAGAGGAATGTGTGGACAGCGAGGGCAGATTATACACGAGAAAAGTCGTACAGATTGAGAGATTTTGGGATCGACCGACTTCTCCCAGTCCTCCCCTTGCCAAAGCGCCGAtgattgagaaatttttttcaaatgtggAGGGTGTAAAGGTCAGAGATAAGAACTTACCTACGGGACCTACGCGGATGTATCGCTGCAACCAGTGCcttgaacattttccaaagttAGGAGACTTTCGGGTCCACGTATGTCTTCATGGTAATAATCAATGCGGGCACTGCGATCAAGCTTTTGCAACAGCTAGAGCATTGCAGCTCCACATGAAGGTACATGATAGCGAGACTGACGGGATGCAGCGTATGTTTGTCTGTTCTACCTGTGGCACAGAGTTCTCATCTCACAAAAGTCTTCGGTTACATTCACGAATGCATGCACCGGTGAGAGCGAGGCATGTCGACGCCCCAGAAGGCACCCACAGTGCCACCTTTACTTGTCCTGAATGTGGAAAAGTTTTATCAGAGTCGTATCGAGTCGCACATATGGCTCTACATTCTGGTGGTTCTGTTACCTGTACCGTCTGCAATAGAAAATTCGATTCGGCCGATAGTCTGGCCATGCATGCAGCTGTACATACAGAATCAAATCATTCCCACTCGCCGACACCACCTCGAGGGGAAGGAAGCGACGGGGCAGATGCTCAGAAACCTTATCAGTGCCAGCATTGTGGGCGTCGGTTTGCTAGACCTCACGAAAAAGTCAAACATGAGCGTATACACACTGGAGAAAAACCTCACGCTTGTGAGGTATGTGGGAAGACGTTTCGTGTCTCCTACTGTCTGACTTTGCATATGCGAACTCATACCGGTGTTCGTCCATACGTTTGTCAGCATTGTGGTAAAAGATTTAAAGCATCTTCGGTCTACAATCATCACTTACTTACTCATGGCGAAGAAAGAGCGTACACTTGTCCGTACTGTCCCAAGACTTTTAAAACCCGGGTTCAACTTGCCGGGCATAAAAATAGCCATACAAAACCGTTTAGATGTACCGAATGCTCGAGACCATTTGCCTCGTTATATGCGGCTCGAGCGCATATACAGACTCACAAGAAAGACAATAATCTTAAATTCAGTTGTTATATTTGTGGGGCTTCTTACGGTAGAGCATTTGCGCTCAAAGATCATTTGAAACAACATGGTCAGGATGTATCAGCTCCGCCTGAACCCGctagagaagaagaagtccAAGAAGAGGACGACTTCCTTCTTGCCgaagaagaagttgaagaTGATGAGCTGGTAATTCCTCCACCTATGCCAGATGCTCATTCCTCAGAGGCAGAAGAATCAGATTAG
Protein Sequence: MGSLSLMCPMCCGETFNNPQSLKYHLLSITDNLYCPSCSERFDSVLALVQHLDRCGQSPEPETEVLMEANVEQINESFLATVNHGDIMIVGEPRSIQVGDNGEINVVEELDVGERESNRVESVLKDDRESPSLVNESKRKSPTPEPLVELRRVNSDTPVTDKDIITILPADSELLDNEDSNLMSDTHTLIEDVDDVEDMNDSGILQVKQELCEVKLEELEADALYSCSSCGMSFNSVLEHIKEFHDGQEVVLEMAEQQLDDLPTPASITPPEEPTSVIANRQRQMMNTLRTEECVDSEGRLYTRKVVQIERFWDRPTSPSPPLAKAPMIEKFFSNVEGVKVRDKNLPTGPTRMYRCNQCLEHFPKLGDFRVHVCLHGNNQCGHCDQAFATARALQLHMKVHDSETDGMQRMFVCSTCGTEFSSHKSLRLHSRMHAPVRARHVDAPEGTHSATFTCPECGKVLSESYRVAHMALHSGGSVTCTVCNRKFDSADSLAMHAAVHTESNHSHSPTPPRGEGSDGADAQKPYQCQHCGRRFARPHEKVKHERIHTGEKPHACEVCGKTFRVSYCLTLHMRTHTGVRPYVCQHCGKRFKASSVYNHHLLTHGEERAYTCPYCPKTFKTRVQLAGHKNSHTKPFRCTECSRPFASLYAARAHIQTHKKDNNLKFSCYICGASYGRAFALKDHLKQHGQDVSAPPEPAREEEVQEEDDFLLAEEEVEDDELVIPPPMPDAHSSEAEESD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01413613;
90% Identity: iTF_00939805;
80% Identity: -