Aequ007003.1
Basic Information
- Insect
- Ametastegia equiseti
- Gene Symbol
- -
- Assembly
- GCA_963989295.1
- Location
- OZ022391.1:23104063-23105877[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-07 0.00012 22.4 0.0 3 37 16 50 15 56 0.89 2 2 4.5 3.4e+03 -1.4 0.0 4 25 419 440 417 440 0.86
Sequence Information
- Coding Sequence
- ATGCCTCGCAATTACATGCGAAAGACCGAAccaaaatatcaaattgaaGATCTTCGCCATGCAATCGAAGATGTTAAAAGTAAAAAGCTCACATTGGGCCAAGCAGCTACCAAATACTCGGCGCCAAAAACAACATTATTCAaacaattgaaacaaaaagacTTCAAGGTACCAAAGAAAGGTCGATACACTGTATTTAATAAACAACAAGAAGACCAGCTAGAAAAATACATACTTGATTGCTGCAAGTCTTTTTATGGCATAACACCCAATTCATTACGGAAAATTGCTTTTCGATTTGCTGAAGCTAACAAACTGAAACACAGTTTTAATAAAGAAACCCAGCTGGCAGGCAAAGACTGGTACTATGGCTTTATGTCTCGACATCCTTCCATCAGCTTACGGATTCCAGAAGCTACTTCACTCAACAGAATAACAGCTTTCAACGCCACCGAAGTGAATCTGTTCTTCGACCAACTAAAAACGATCCAAACGAAACACAATATACCTGGTCATCGTATTTTTAATATTGATGAAACCGGCATCAGCACAgtccaaaaaaattacaagatcTTGGCTCCAAAAGGTTTGAAGCAGATAGGAAAAGCGACGAGCGGAGAACGCGGTGTCACAACAACAGTAGTTTGTGCTGTCAGCGCTGGTGGCATATATGTCCCTCCCATGTTTATCTTcaaaagaaagagaatgaaCGAACTGTTAGTCAAAGGGTGTAACAGCGACATGATTGCCACGACTTCTGATTCCGGTTGGATAAATGAATCCATATTTCTTGACTACTTGCGACACTTCATTTCTTTTGTGAAACCTACCAAAGAAGAACCAGTATTATTAATACTCGACAATCACGAAAGTCACATCAGCCTGGGCGCATACCAGCTTTTTCGAGAGCACAACCTGCAAGTTCTTTCCCTGCCACCCCATGTATCTCACAAAATGCAGCCACTGGATCTTACAATCTTCAGTTCACTGAAGATGGCCTACAATAAAGAATGTGAGCTTTACATGATTAATAATCCTGGCAAACGAATAAGCCAATACGAGGTTGCAGAACTTTTTACAAAGGCGTACAACAAAACAGCTAACATAAGCAAGGCTGTCAGTGGATTTAGAGCTGCTGGAATTCATCCCATTGATCCTGACAAATTCAAAGACAGCTTCGAAAATACCGTATTTGATCAATCCCACACCAGTCAGACTCAAGAATGCGAACTTAATGAAACTGTAGCTGAGCAAAGTTTGAATGAGTCCGTTAACACTATCAGCCAAGGACAAACACCAACACAGGACGCCGCTtctatttctgaaaatgaCATCGATTTGACCGTTACCATTAATACTCCGCTTCCATCCACTTCTGTGCTTCTTGCCGAAATTACCAATGTGCCTGTCATTCCTAAAACAGGTACCACTTCTAAGCGACAGAATAAGAAGCATTCTCAGATTTTATACAGCACaccaatgaaaattcaactggaggaaaaacagaaaagacaAAGTGAGAGGAAagctaaaaaagaaaaagttccAACTAAAAAACCAGGAAAAAACACTAAAACCATACAAAAAAAGCCACGAGTCAAGGGTAAAGGAgtaagaaatttgaagaaggCTTTAGAAGGAAATGAAAACGAAGAGGAGTTTTACTGTATTATGTGCTACGAGAAGTATGAATCCCCACCGACAGAAGATTGGATCATGTGCGCCATTTGTAATCTCTGGGCACATGAAAAATGTACTACCGGCGAGACTAGTAAAGGTTACGTGTGTGACGTATGCCGCACAAAGAAAGTGtag
- Protein Sequence
- MPRNYMRKTEPKYQIEDLRHAIEDVKSKKLTLGQAATKYSAPKTTLFKQLKQKDFKVPKKGRYTVFNKQQEDQLEKYILDCCKSFYGITPNSLRKIAFRFAEANKLKHSFNKETQLAGKDWYYGFMSRHPSISLRIPEATSLNRITAFNATEVNLFFDQLKTIQTKHNIPGHRIFNIDETGISTVQKNYKILAPKGLKQIGKATSGERGVTTTVVCAVSAGGIYVPPMFIFKRKRMNELLVKGCNSDMIATTSDSGWINESIFLDYLRHFISFVKPTKEEPVLLILDNHESHISLGAYQLFREHNLQVLSLPPHVSHKMQPLDLTIFSSLKMAYNKECELYMINNPGKRISQYEVAELFTKAYNKTANISKAVSGFRAAGIHPIDPDKFKDSFENTVFDQSHTSQTQECELNETVAEQSLNESVNTISQGQTPTQDAASISENDIDLTVTINTPLPSTSVLLAEITNVPVIPKTGTTSKRQNKKHSQILYSTPMKIQLEEKQKRQSERKAKKEKVPTKKPGKNTKTIQKKPRVKGKGVRNLKKALEGNENEEEFYCIMCYEKYESPPTEDWIMCAICNLWAHEKCTTGETSKGYVCDVCRTKKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01156259;
- 90% Identity
- -
- 80% Identity
- -