Aequ012293.1
Basic Information
- Insect
- Ametastegia equiseti
- Gene Symbol
- bab1
- Assembly
- GCA_963989295.1
- Location
- OZ022394.1:1523154-1526509[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.3e-17 1.8e-14 53.9 0.0 1 43 55 98 55 100 0.95 2 3 5.1 3.9e+03 -1.6 1.4 6 15 180 189 178 192 0.88 3 3 3.5 2.7e+03 -1.1 0.0 3 13 219 229 218 233 0.78
Sequence Information
- Coding Sequence
- ATGTGGTTCCCGAATTCATGgtattttctccttttttggGGGGGTGTTACAGCAGACAGCTACCAGTACCAGCTCCAATCGATGTGGCAAAAGTGTTGGAACACCAATCAGAGCCTGGTCCACAATCTCCGGTTCCGGGAACGTGGACCCCTAAAGTCCTGGAGGCCCGAAACCATGGCTGAAGCTATTTTCAGCGTCCTCAAGGAGGGTCTTTCCCTCAGCCAAGCCGCCAGgaaataTGACATACCATATCCAACTTTCGTCCTCTACGCAAACCGCGTGCACAATATGTTGGGCCCCAGCGCGGACGGCGGAGCCGGTGAGTATCTCAGACCAAAAGGTCGCGGACGACCCCAGAGAATTCTTCTCGGTGTATGGCCAGACGAACACATCAGAGGTGTGATCAGAGCCGTTGTATTTCGCGATGGACAATCGGCACACATCGTCAAGGAAGAACCAGCCGCAATGTACCCAAGCCTTGCTAGTTACGCAGCATGCAATGGTCCCGAAGGTGCAGTCAGCCCTGGAGCTGCTGCGGCTGCTGCTGTCGCCGCTGTTGCTcaggGACTCAGACATCAGATGTGTAGCATGGTGGCAGCGGCCCATTCCCAACAGCACGACATGATAGGAACAAATCTGTCTGCCAATTTGTCTACGAATATACAAGCGGCGATACAGGCGCAACAGAACAACGGAAATTCACCATTGAATTTGGGACTAGCAAGTCCAGGATCAGGCCCGCCAGAAAGTCCCATGGAAAGTCCTCTGGCGAGTCCTTTGGGTCCTTTAATGGACCCGGCCCAAATCCCAGGCAGCGTTGAAGTTGGAATTGGAGTAAGCGGAATGACGTACAAACCGGCGCGCAGCTTCGTCAGTCCAAGACCTGAAAACTTATTTCAAGAGGACATAGCCGACTTGGTTAAAAGTCCCCACGCCCTTAAGGACAAGGACAAAATACCCGTAAAACTTGAACCAATACAGGCCGATTCAAGGTGCGAATAG
- Protein Sequence
- MWFPNSWYFLLFWGGVTADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGQSAHIVKEEPAAMYPSLASYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMIGTNLSANLSTNIQAAIQAQQNNGNSPLNLGLASPGSGPPESPMESPLASPLGPLMDPAQIPGSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHALKDKDKIPVKLEPIQADSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015716;
- 90% Identity
- iTF_00939445;
- 80% Identity
- -