Aequ027318.1
Basic Information
- Insect
- Ametastegia equiseti
- Gene Symbol
- bab2_1
- Assembly
- GCA_963989295.1
- Location
- OZ022403.1:11199956-11215051[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.3e-12 4.9e-09 36.5 0.0 1 39 378 417 378 421 0.90 2 4 8.5e-12 6.5e-09 36.1 0.1 2 39 433 470 432 473 0.94 3 4 3.1e-18 2.4e-15 56.7 0.0 2 45 488 532 487 532 0.97 4 4 1.8e-18 1.4e-15 57.4 0.1 1 42 539 581 539 582 0.97
Sequence Information
- Coding Sequence
- ATGAACCGGGATTGGGGAACGCATTACAGTGGAGGGATGGCGGGGCAGCACTACTGCCTGCGCTGGAACAATTACCAGTCGAACATGACTTCCGTGTTCCATCAGCTGCTTCAAACTGAGGCATTTGTCGACGTGACGTTGGCCTGCAACGAGGCTTCCTTAAAAGCTCACAAGGTGGTTTTATCGGCGTGCAgttcgtattttcaaaaacttttgCTATCCAATCCTTGTAAACATCCTACCATCATCATGCCTCAGGACGTTTGTTTTACGGATCTTAAATTCATCATCGAATTTGTCTACAGAGGTGAAATAGACGTTTCACAGGCTGAACTACAGTCCCTATTGAAAACCGCTGATCAATTGAAGATCAAGGGACTGTGCGAAGTACCAGAAAGTAAAGAGGGACCGCCGTCAGTTAGCTTGAGCTCACCGCCTAGGGATCGTGACTCATCGGGTACACCACGTTTGAATTATACTAAATTAAGAAGGCAACATCATCCTAGATACAAAAGGCCCAGATTTGAGGCCAGGTCCGATTCAAggatattcgaaaaatacaaaGAGGAGGAAACTGGGGGATTTTGTCGCGACGATAAAGAgAATCATAGGGACTGGCAGACAGAAGATGAAGAATTTGCAGAACCTACAGTAGTTCTAGAATCGCGACAGAAGGAATTAAACAACGGTAACACAAACAACAATAACGGTGAGATGTTTTGTCACACAGGAATGGGACATTACGGTCATCATACGGATCCAGGAGACGTTGATTTACCACCCGAAACTCAACCCACACCTCCAAGCGCTACTCTTGTCGGTACGACAATAACGCATTTGAGAGATCCCGACCACCAGTCGACAGaaatacaaaattgtgAGAgtgttaaaataaaatttgagaCACTGCACGCGATGGACTCGACGGACACGATAGATATAGATAGTCATATGTCAGATCGAGCTAGCGTCAGTTCAAAAACAACAGGAGATAATGACAACATGATGATGATCACTCCAGAACTATTGGGACTAATGCCTTCCGGAAGTTCGGGACATTCTGAAGCCGGGGACAACGTCAGGTCTCATTCCGTACAAATCGTTTCTCATCATCACGGTTCTAAATCTTGGACTCAGGACGACATGGACGCTGCTCTTGATGCCTTAAGAAATCACGATATGAGCCTCACCAAGGCTTCAGCTACTTTTGGCATCCCTTCAACCACTTTGTGGCAGAGAGCGCACAGACTTGGTATTGATACCCCTAAAAAAGACGGGCCTACTAAATCGTGGAGCGACGAAAGTCTTAATAACGCATTAGAGGCTTTGAGAACGGGGACAATATCGGCTAATAAAGCTTCTAAAGCTTTTGGCATACCTTCCAGTACTTTGTACAAAATTGCCAGGCGAGAGGGGATCAGATTAGCCGCACCTTTTAATGCCAGTCCTACTACTTGGTCTCCCGCCGATCTTGATAGAGCTTTGGAAGCTATTAGGTCTGGACAAACTTCCGTACAAAGAGCATCTACCGAATTTGGTATACCGACGGGAACTCTTTACGGAAGATGTAAAAGAGAGGGAATCGAATTGAGCAGGAGTAATCCTACCCCTTGGAGCGAGGACGCTATGACCGAAGCATTAGAGGCTGTTAGAATGGGTCATATGAGCATCAATCAAGCTGCGATACATTATAACTTACCGTATTCTTCCCTTTACGGTCGTTTTAAAAGAGGTAAATACGAAGAACCGGTAGGAAATGAAATGTCTCAGGATAGCAACAGCCTTCATTATCACAGCCCAAACCAAAATCATTCATCTTCTGTTCCCGATCAAATGCCCTATCAGGGTAGCTGA
- Protein Sequence
- MNRDWGTHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFTDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESKEGPPSVSLSSPPRDRDSSGTPRLNYTKLRRQHHPRYKRPRFEARSDSRIFEKYKEEETGGFCRDDKENHRDWQTEDEEFAEPTVVLESRQKELNNGNTNNNNGEMFCHTGMGHYGHHTDPGDVDLPPETQPTPPSATLVGTTITHLRDPDHQSTEIQNCESVKIKFETLHAMDSTDTIDIDSHMSDRASVSSKTTGDNDNMMMITPELLGLMPSGSSGHSEAGDNVRSHSVQIVSHHHGSKSWTQDDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRMGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVGNEMSQDSNSLHYHSPNQNHSSSVPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_01413017;
- 80% Identity
- iTF_00060460;