Aequ024961.1
Basic Information
- Insect
- Ametastegia equiseti
- Gene Symbol
- retn_1
- Assembly
- GCA_963989295.1
- Location
- OZ022401.1:11226173-11233531[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-20 9.5e-17 61.9 0.0 15 89 3 75 1 75 0.94
Sequence Information
- Coding Sequence
- ATGTTGCGATCAGGAACGCCGATCAACCGATTACCAATAATGGCAAAGTCAGTTCTAGATCTGTACGAATTGTACAATCTAGTCATTGCCAGAGGTGGACTTGTAGATGttatcaacaaaaaattatggcaGGAAATCATTAAGGGGCTCCATCTTCCGTCCAGTATCACTTCGGCAGCCTTCACGTTGCGCACACAATACATGAAGTACCTCTACCCTTACGAATGTGAAAAGAGGCGGCTTTCGACCCCAGCCGAGCTTCAAGCCGCCATAGATGGTAACCGAAGAGAAGGACGAAGGAGTAGCTATGGTGCTTACGCGGGTGGTGGTGGTCCTGGTGAGTCCATGGTTCGCGGAAGTCCCCATACACCAAGTTCGTTGTCGCTTCACGCCCAAATGTCACCCTTGTCTTTGGTCACCGCAGTAGCCGGTGGTCAGCATCACGGTCCACAGTCACTTGTCAATGGAAGTGCAGCACACACTCCACTACCACATCATCCACATCATCCACAGCATCCTCAGGGACCTTTAGGACAACCTTTGAACACCGGACCAATTCCAGGACTCGCACCCTCCGAATTTGAGGCACGTATGGTCGAGTACGTTAAGCTGTTAAACAAGGAATTACGAAGTGCTGGGGCTGGGACGCCACCCCCGATGATCCACCGGCAAGGAAGCGCCTCACCACCCTCGTCCACCTCGCCACGTGACGCTGCCCTAAATGCCCTAGAAATGTCACGGTTAACATTGTGGAATATGTACAACAATAACACGCTTTATCCGGGGGTTGGACATCAGCCACCCCTTTCACCTCAAGCTCCACATTCTCCTGTACCACCAGCCGCCAGTCCGGAACCACAAAGAGAAGCCCTCGACTTGGGTCTCAGATCTTCACCGATGTCTTCACCTCCAGCGAGAAATAGTCCTCCGACATCCGGTGGCGGTGTTCAAGTCAAAAGAGAACAGGATCTTGGCGGTATGACGATAGGTCCACCACCAGCCAAGAGATTACTCTCAGAGGATGATAACACACCTGAAAAATCAGTAGCGGCGTTAGCCGGTGCTCACATCAAAATTTCCAACAGAGgtGATGGGCGTAACGGTGAAAATTCTCTAGTGGTCAGTATGGAGTTGAACGGTGTTATGTACCAGGGTGTACTTTTTGCCCAAAACGAAAACAGCAGTAGTGGAAGTACGACACACGGTACATCGGCAACAAACAACAATACGAAAACATCACGCGGCATTGtgtcgtga
- Protein Sequence
- MLRSGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAGGGGPGESMVRGSPHTPSSLSLHAQMSPLSLVTAVAGGQHHGPQSLVNGSAAHTPLPHHPHHPQHPQGPLGQPLNTGPIPGLAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPSSTSPRDAALNALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQAPHSPVPPAASPEPQREALDLGLRSSPMSSPPARNSPPTSGGGVQVKREQDLGGMTIGPPPAKRLLSEDDNTPEKSVAALAGAHIKISNRGDGRNGENSLVVSMELNGVMYQGVLFAQNENSSSGSTTHGTSATNNNTKTSRGIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_00718317;
- 80% Identity
- -