Aarm002489.1
Basic Information
- Insect
- Amblyteles armatorius
- Gene Symbol
- Hr39
- Assembly
- GCA_933228735.2
- Location
- OW121686.1:12156111-12161158[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3 1.8e+04 -5.7 10.1 45 159 236 342 200 371 0.40 2 4 3 1.8e+04 -11.5 13.1 63 145 336 428 294 461 0.43 3 4 5.4e-08 0.00032 20.2 0.0 1 21 530 550 530 555 0.92 4 4 2e-71 1.2e-67 229.2 0.0 92 408 591 908 562 908 0.79
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAACGGGCCCACGGAGGGCCCGGGCTGGTGGCCTCCGGCGCAATCGTGGAAGTCATCCAccacctcgtcgtcgttgccgatTCCATCGTCCCGCACACTCGAGACGGGAAAGAACGTTTCCGTCACGACTATCAACGTACCACCGGCCCAGGAAATGCACGATGGTAAAAGCGTCTGCAAGTTCGTGGGCGGACAGAACGGCGTGACCGTATCGGTGGTCTCGAGTTGCGGCAGCGGTACCGGCAACGGAATGGGCACAGGACCcggcggaggcggaggaggtGGCGCGTCCTCCTCGTGTCCGGATTCGAGTtcgctcgacgatctcgaggaCAGTGACGGTGAAGTTAGCAAAATCGACTTTCGCGGTGTTAATCTgcgaacgaagaagaagcgcGATGCCTCCGGCGGATCGGAGAACGAGTGCGGCGCCGTCGGCGCCGACAATctcgagcagcagcagcccgAGAGACCGATGTCATGGGAGGGCGAGCTTTCCGATCAGGAAATGTCGTCGAACACGATCACCAATCAGGACCACGAGGAGACATCGATGGAGGGTGTCCAAGTGTGCGGTGCGAGTCCAGGACCTCAGGAGCAAAAGTTCCCGATAAAACCGGAGCCGGATTTTCGGTCGAGTCCAGGTCTCGCGATCGGTTCGCACAGCGACGTGAACCTGACACTGTCGCACGCCCAGCAGCTTCAGCAGCACcaccaccagcagcagcagcgcggCATCGACTCTCTCGAGCAGACCCAGCAGAGCGACTTGCCGTTGCTCGTCGGCAAGCTCCTCGGCGGTTACAACAGTTCGACGCCGAACCACAGTCCGATACTGAATCCCCGACATCACCTAACGAAGCACGGTCACACGAGGTCTCAGGTGCCGTCGCCGGATTCGGCGATACACTCGGCCTACAGCGTATTCAGTTCGCCGACCCAGAGTCCTCACGCCGCTCGTCATTCCGCCCTCGGTCCCGGTAGTCCGGTGCCGTCCTCGTCTCTGTCGCTCTCGCGTCACAGTTTCAACAACTCGACGTCCTCCCTGTCGCTGTCGTTGTCCCACTCTTTGTCCCGCAACAATTCCGACGCCTCGAGCAGCTGCTACAGCTACGGCTCGCTCAGTCCTCCGACGCATTCGCCGGTCCAGCAGCCGAGACACTCTCACGTCCAGCACCATCATCACCATCAGCAACTGCCGCAGGGCAGTCCGTTGCATCTGCCCCCGGCCTCGGTGAGCAACGCTCATCACTACTCGACACCGGGCTCGGAAATCTCATCCGAGGGCCATCCGGAGGACCAGGAGGATTGCAAGATCCCGTCGGCGCCCTCGGGAATATCGACGAGGCAGCAGCTAATCAACAGTCCTTGTCCGATATGCGGCGACAAGATCAGCGGCTTTCACTACGGTATATTCTCGTGCGAGTCCTGCAAGGGTTTCTTCAAGCGTACCGTGCAAAATCGAAAGAATTACGTCTGCCTGCGCGGCGCCGGCTGTCCGGTGACCGTCGCCACGAGAAAGAAATGCCCCGCTTGCCGCTTCGACAAGTGTCTCAACATGGGAATGAAACTCGAGGCGATTAGGGAGGACAGAACGCGTGGCGGCAGAAGCACCTATCAGTGCACTTACACCCTACCGGCGAATCTGATCGGCAGTTCCGCCGGTGGAATGCCCGGGGACAAGATGACCGGAGGCACGTGCAGTCCCGCCCCGCCGGGCTCCGAGCATCATCATTCCGCGAGACATCACTGGAATCACTCGCACAAGATGCAAGTCGTGCCCCAGTTGCTGCAGGACATAATGGACGTTGAGCATCTCTGGCActacaacgacaacgacagaACGTCGGTGGGCAGTCAGAGCTCCGGTCTCGGTGGAAACGGCGGCGGGATGACGAACGAAGTGCCCGGGGGACTCGGGGGTCTCGGTTCCAGTGCTGGCAGTGGAAGCGGTGCGAGTAGCAACGGCAATGTCGACAATCGTTGCGAACCGGCGAGATCGAGCCCGCCCGGAAACGCCGGCAACAACGAGCATCAGCAACAGCAGGCGAATTCACCGACGAACAACCAATCGACCGGCGGCACAAACGCCACCAATCCCAATGGGAATTCGACTCAGAATCCCGACTTCCTGTCGAACCTTTGCAACATCGCTGATCACAGATTGTACAAGATCGTTAAGTGGTGCAAGAGTTTGCCACTcttcaaaaatatatcgatcgacgatcagaTATGCCTGTTGATTAATTCGTGGTGCGAACTCCTGCTGTTCTCGTGCTGCTTCAGGAGCATGAGCACTCCCGGCGAGATCAGAGTCTCACTCGGCAAATCCATCACCCTCGAGCAAGCGAGACAACTGGGACTGGCCACTTGCATCGAAAGGATGCTCGCGTTCACGAATAATCTCAGGAGGCTCAGGGTCGATCAGTACGAATACGTGGCGATGAAGGTGATAGTTCTGTTGACTTCGGACACGAGCGAATTAAAGGAACCCGAGAAAGTACGAGCATCGCAGGAAAAGGCTCTGCAGGCTCTACAGCAGTACACGATCGCCAAGTATCCGGAAATGCCGGCAAAATTCGGTGAGCTTCTGCTGCGGATACCGGACCTGCAGAGAACTTGTCAAGCCGGCAAGGAGTTGCTGAGTGCTAAGCGTGCCGAGGGCGAGGGCAGCTCTTTCAATCTATTGATGGAATTGCTTCGTGGAGATCACTGA
- Protein Sequence
- MSEQNGPTEGPGWWPPAQSWKSSTTSSSLPIPSSRTLETGKNVSVTTINVPPAQEMHDGKSVCKFVGGQNGVTVSVVSSCGSGTGNGMGTGPGGGGGGGASSSCPDSSSLDDLEDSDGEVSKIDFRGVNLRTKKKRDASGGSENECGAVGADNLEQQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPGLAIGSHSDVNLTLSHAQQLQQHHHQQQQRGIDSLEQTQQSDLPLLVGKLLGGYNSSTPNHSPILNPRHHLTKHGHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGPGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHVQHHHHHQQLPQGSPLHLPPASVSNAHHYSTPGSEISSEGHPEDQEDCKIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSSAGGMPGDKMTGGTCSPAPPGSEHHHSARHHWNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRTSVGSQSSGLGGNGGGMTNEVPGGLGGLGSSAGSGSGASSNGNVDNRCEPARSSPPGNAGNNEHQQQQANSPTNNQSTGGTNATNPNGNSTQNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIAKYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00059522;
- 90% Identity
- iTF_00057987;
- 80% Identity
- iTF_00059522;