Basic Information

Insect: Amblyjoppa proteus
Gene Symbol: -
Assembly: GCA_963922035.1
Location: OY998233.1:1575218-1578507[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.8 3.7e+02 2.4 0.0 3 16 222 235 221 237 0.91

2 16 0.018 1.8 9.6 2.4 1 23 407 430 407 430 0.95

3 16 1.2 1.2e+02 3.9 0.4 1 21 437 457 437 458 0.92

4 16 5.8 5.6e+02 1.8 0.1 1 13 466 478 466 484 0.84

5 16 5.5e-06 0.00053 20.7 1.8 1 23 519 542 519 542 0.94

6 16 0.018 1.7 9.7 0.1 1 23 555 578 555 578 0.97

7 16 2.8e-05 0.0027 18.5 3.1 1 23 599 622 599 622 0.93

8 16 0.17 16 6.6 1.0 1 20 628 647 628 652 0.91

9 16 0.057 5.5 8.1 4.3 1 23 665 687 665 687 0.93

10 16 1.3 1.2e+02 3.9 0.1 3 23 695 716 693 716 0.87

11 16 1.1e-05 0.001 19.8 1.6 1 23 730 752 730 752 0.99

12 16 4.1e-07 3.9e-05 24.3 1.6 1 23 758 780 758 780 0.98

13 16 0.0019 0.18 12.7 0.9 1 23 786 808 786 808 0.98

14 16 0.0041 0.39 11.7 4.1 1 23 814 836 814 836 0.99

15 16 4.8e-06 0.00046 20.9 0.7 1 23 842 864 842 864 0.99

16 16 3.1e-05 0.003 18.4 2.1 3 23 872 893 870 893 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.8	3.7e+02	2.4	0.0	3	16	222	235	221	237	0.91
2	16	0.018	1.8	9.6	2.4	1	23	407	430	407	430	0.95
3	16	1.2	1.2e+02	3.9	0.4	1	21	437	457	437	458	0.92
4	16	5.8	5.6e+02	1.8	0.1	1	13	466	478	466	484	0.84
5	16	5.5e-06	0.00053	20.7	1.8	1	23	519	542	519	542	0.94
6	16	0.018	1.7	9.7	0.1	1	23	555	578	555	578	0.97
7	16	2.8e-05	0.0027	18.5	3.1	1	23	599	622	599	622	0.93
8	16	0.17	16	6.6	1.0	1	20	628	647	628	652	0.91
9	16	0.057	5.5	8.1	4.3	1	23	665	687	665	687	0.93
10	16	1.3	1.2e+02	3.9	0.1	3	23	695	716	693	716	0.87
11	16	1.1e-05	0.001	19.8	1.6	1	23	730	752	730	752	0.99
12	16	4.1e-07	3.9e-05	24.3	1.6	1	23	758	780	758	780	0.98
13	16	0.0019	0.18	12.7	0.9	1	23	786	808	786	808	0.98
14	16	0.0041	0.39	11.7	4.1	1	23	814	836	814	836	0.99
15	16	4.8e-06	0.00046	20.9	0.7	1	23	842	864	842	864	0.99
16	16	3.1e-05	0.003	18.4	2.1	3	23	872	893	870	893	0.95

Sequence Information

Coding Sequence: ATGCTGACGCTCATTCTGCAAACCTCGGAGGGACAGCAGATCGAGTTGAACGTCCAGCCGGAGGATACGTTCGCCGATTTGAAGATACAATACTCCGACCCCGACGGCTTGTCCGAGTCGCTGGAACGACTCATCACCAATGGGGCCACAGTGGAAGAAAACACGAGGATATTCGACTACGTAACAAGCAGtgCACATGAATGGTTCAGTGCGGGTGAGATGCCAGAGTCGGACGCGCAGCACTCAGAGCCTGTGGATCCTCGGACGAGGGTGAAAGAATGTTGCGCTCAAGGCTGCTCCAATTCCGAAGCCGTCACTCCTGGTAAACCATTTTTTCCTTTGCCTACAGATCACGAAAGGCTCTCCACGTGCCTGACGGAAGCGGGCAGGCTGGATCTGTACAGCCAGGTTCTCGGCTTGGACGCAGATAGTTACCAGAAGTATTTCTTATGCGGAAATCACTTCGCCGAAATTTCTTTACCAACGGCGCGCGCTGCCGAGCCGACGTCCACGATATCGCTGTTGAAGCCGAAGAACGCGAGAATTCAGGCCGACGTTACCAACGAACCGAAAAACGAGCTTCTAGAAGTCGATTCCGAAACTAGAGAGTCCGTTTTCCATCTACCGAGAACACCGGACGATTACGAGCATCCCGGAATTCTTTGCCGTTTGTGCGGCGAAACTACAGCGAATCCTGTACATTTGTACGCGGAGAAGGGAGAGAACTCTGAGTACAGTCTTGCTGACAAGATCAACTTGTGTCTTCCCGTTacggTGAGCGTGACGGATCCACTGCCGAAGCAGATATGCCTAGACTGCCAAGTTAAACTGAACACTTGCCACGAACTCGCGATATCCTCATTGAGAACGGAGGACAAGCTTACTCATCTCTTGCGAGAGAAAAAGTTCTGCGCGAGCGGTGCGTCTGAGCATCAGTGTCCTCTGTGTCTCGAGGGTGCCATGCAGATGGTAAAAAGAAGCGGTATCTACCGAAAGGAGGATCTACAGAACGACctaattttttcgaacgaCCGGAGACACGCGAGAGGCTCCGCGGGGACCGAGGAGGAGTCCAAAAATTTGATCAACTTTATCACGGACAGCAGTTCGCTTCCGATGCCGGAAGGAGAATTCCCGTGCTCCGTGTGCGACGAGAGGCTGATCGGCGTGACGGCGATCCGTTCGCACCGATGTCCAACTGATAGGAAACATTCTCCACACGACTGTGTTatctgcgataaaaaaaatttcgctcaTCCCCGCGAGCTCGAGCTTCACTATCGTCGGCACGGCATAAAGGAGGAAAAATTTTTCTGCGAGCTCTGCAGCTACTCGTGCGGGCGGCTCGACGAGGCGAACGAGCACCTCAAAGCCTGCAGGCCCGAGTTCTGGCAATTCCGCTGCGACGCTTGCGACAAGACGCTCGCGAAAAGCGAATCGCCGAACGATCACGACTGTCACGGCGCTTCGTCGGATCCTCGCGAGGCCGAGATGAAATTTTCACCGGAGCCGGAAGCACCGAAGGCATCCGCGAAGAAGAGGCAACCGGCGCGCTACAGTTGTCACTTCTGCGAGAAGCGATTCGCGCGAAAGGGAAGCTTGCAGAAGCACATATCGGCGGCGCACAACGACTCGATGGACGATCCAGCGGCCTCGAAGTGCTACAAGTGCAGAAGCTGCAACGAGGCCTTTGTGCTGGAGGCCGACGTCGCGACGCACATGAACGTTCGCCACCTCGGCGACTCGCACTCCGGCCACGAGCACGCCGTCGACGAATTGACGGTTGCCAGTTTGTACACCTGCGAGTACTGCGAGCGGTGCTTCACGACGCCGAGCTCCCTCCACGATCACCGGGAGGCTGAGCACGACAATATTTCGTGCTACTCCTGCCCGACGTGCCTCGAGATGTTCGACTCTCACAAGCGGCTTGCCGCCCACAAGAGTCTGCGATCTCATCACAAGCCTCTCGATTACCTCAGCTTGAAGCAGCTCTACCTCTGCAGGTACTGCGACAAGACCTTTCTCCATCATTCTACTCTGTCAGCTCACGAGCTTCAGCATCGCGAGCTCGCGCCCTATCTTTGCAGGCCGTGCGGCCTCAGCTTCGAGACTTACAGGGAGGTCGCCTCACATCGGGACGTCGTTCATCCTTACCAGTCGGAGCTTCATGAGAGCTCCAGCCGATCGTACAAGTGCCAGTACTGCGGCAAGCTCTTCTCTCACGAGGTCGTTCTCGTCAAGCACATCAGAATGCACACCGGCGAGCGACCTCACAAGTGCTCGGTCTGCGGCAAGGGATTCTCGCAGAGCTCCGGACTCTACACTCACATGAAGATACACTCGGACCTGCGGCCCTACAATTGTCCGAGCTGTCCGCGCACCTTCAAGATCAAGGGCGATCGCAACAATCACGTGAAGAAACACTCGGGAAATCGGCCGTACAAGTGCGAATTCTGTTCGAAGGCGTTCATGACTCAGCACGTTTACAGTCAGCATCGGAGAATTCACACGAACGAGAGGCCGTACAAGTGCGAGATTTGCGGCGAGGCCTTTCGGAGATCTTATGTCAGAACGGTCCACATGAGAAGGCACACTGGCGAAAAGCCGCATCTGTGCGATATGTGCCCGAAAACTTATCGCCAGCGCAGCGATCTCGTCAAGCATCGAAAGGTACAGCACGGCATAAGCGTCGCAGCGAACAACGAAATCGTTTTTCCTGACGAACGCGAGGACGATTCTTACGAGTCATTTGCGAAAGGTAACACGATCGTCGAAACTGCGGCTGGTCATTCGCTGCTGCTGGGCCTCTGA
Protein Sequence: MLTLILQTSEGQQIELNVQPEDTFADLKIQYSDPDGLSESLERLITNGATVEENTRIFDYVTSSAHEWFSAGEMPESDAQHSEPVDPRTRVKECCAQGCSNSEAVTPGKPFFPLPTDHERLSTCLTEAGRLDLYSQVLGLDADSYQKYFLCGNHFAEISLPTARAAEPTSTISLLKPKNARIQADVTNEPKNELLEVDSETRESVFHLPRTPDDYEHPGILCRLCGETTANPVHLYAEKGENSEYSLADKINLCLPVTVSVTDPLPKQICLDCQVKLNTCHELAISSLRTEDKLTHLLREKKFCASGASEHQCPLCLEGAMQMVKRSGIYRKEDLQNDLIFSNDRRHARGSAGTEEESKNLINFITDSSSLPMPEGEFPCSVCDERLIGVTAIRSHRCPTDRKHSPHDCVICDKKNFAHPRELELHYRRHGIKEEKFFCELCSYSCGRLDEANEHLKACRPEFWQFRCDACDKTLAKSESPNDHDCHGASSDPREAEMKFSPEPEAPKASAKKRQPARYSCHFCEKRFARKGSLQKHISAAHNDSMDDPAASKCYKCRSCNEAFVLEADVATHMNVRHLGDSHSGHEHAVDELTVASLYTCEYCERCFTTPSSLHDHREAEHDNISCYSCPTCLEMFDSHKRLAAHKSLRSHHKPLDYLSLKQLYLCRYCDKTFLHHSTLSAHELQHRELAPYLCRPCGLSFETYREVASHRDVVHPYQSELHESSSRSYKCQYCGKLFSHEVVLVKHIRMHTGERPHKCSVCGKGFSQSSGLYTHMKIHSDLRPYNCPSCPRTFKIKGDRNNHVKKHSGNRPYKCEFCSKAFMTQHVYSQHRRIHTNERPYKCEICGEAFRRSYVRTVHMRRHTGEKPHLCDMCPKTYRQRSDLVKHRKVQHGISVAANNEIVFPDEREDDSYESFAKGNTIVETAAGHSLLLGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00721477;
90% Identity: iTF_00721477;
80% Identity: -