Basic Information

Insect: Amblyjoppa proteus
Gene Symbol: -
Assembly: GCA_963922035.1
Location: OY998228.1:3832720-3838906[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.6 1.6e+02 3.5 3.2 1 23 301 323 301 323 0.89

2 14 0.0019 0.18 12.8 3.7 1 23 328 352 328 352 0.93

3 14 0.037 3.6 8.7 1.8 1 23 472 495 472 495 0.96

4 14 7.8e-05 0.0075 17.1 0.1 1 23 501 523 501 523 0.97

5 14 0.0018 0.17 12.8 0.6 1 23 547 570 547 570 0.96

6 14 1.7e-06 0.00017 22.3 1.4 1 23 576 598 576 598 0.99

7 14 0.0056 0.54 11.3 0.3 1 23 609 632 609 632 0.89

8 14 3.1e-07 2.9e-05 24.7 3.6 1 23 637 659 637 659 0.98

9 14 1.7e-05 0.0016 19.2 0.6 1 23 665 687 665 687 0.98

10 14 5.2e-05 0.005 17.7 1.9 1 23 693 715 693 715 0.98

11 14 1.5e-08 1.4e-06 28.8 0.6 1 23 721 743 721 743 0.98

12 14 4.8e-06 0.00046 20.9 5.0 1 23 749 771 749 771 0.98

13 14 1.4e-05 0.0014 19.4 1.6 1 23 805 827 805 827 0.98

14 14 3.3e-07 3.1e-05 24.6 1.5 1 23 833 855 833 855 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.6	1.6e+02	3.5	3.2	1	23	301	323	301	323	0.89
2	14	0.0019	0.18	12.8	3.7	1	23	328	352	328	352	0.93
3	14	0.037	3.6	8.7	1.8	1	23	472	495	472	495	0.96
4	14	7.8e-05	0.0075	17.1	0.1	1	23	501	523	501	523	0.97
5	14	0.0018	0.17	12.8	0.6	1	23	547	570	547	570	0.96
6	14	1.7e-06	0.00017	22.3	1.4	1	23	576	598	576	598	0.99
7	14	0.0056	0.54	11.3	0.3	1	23	609	632	609	632	0.89
8	14	3.1e-07	2.9e-05	24.7	3.6	1	23	637	659	637	659	0.98
9	14	1.7e-05	0.0016	19.2	0.6	1	23	665	687	665	687	0.98
10	14	5.2e-05	0.005	17.7	1.9	1	23	693	715	693	715	0.98
11	14	1.5e-08	1.4e-06	28.8	0.6	1	23	721	743	721	743	0.98
12	14	4.8e-06	0.00046	20.9	5.0	1	23	749	771	749	771	0.98
13	14	1.4e-05	0.0014	19.4	1.6	1	23	805	827	805	827	0.98
14	14	3.3e-07	3.1e-05	24.6	1.5	1	23	833	855	833	855	0.98

Sequence Information

Coding Sequence: ATGGCGGAGGTATTGCTCTATGATTCGGCAATTTGTCGATTATGTGCGGAGGACAACGGCAACGGTGAATTGCTGTACGCTGTCGACGGCGACGAGCAAGATTTAAGCTCTATGGTGAATCGATACTTGCCGATAAAGATCCGAGACGATGGAAAGTTGCCTCGTACTATTTGTCCCGGATGCAACATACAGCTGGAGGCGACCGTGCAGTTTTTCGAATTGCTCGTCGATGGACAGCGCAAGATACGAGAGATGTGGAAGCAGCAGATGGAGGTGCAGAGGAAAAACGAGCGCGAACGGCTgagagccgagagagagaataCCGAGCTGGCCATCGAAACGCCCGAGctcgacaatttttatactCCTGAAGGAGATGAGCAGTTTTCGCAACAAATCATCATCAAGATTATGCCTGATGGTTCGATGTACGCTGCGGAGCACGATATGAGCTTGCAGATGGAGGGGCTTGACAAGCCACGAAGAAAGAGAGGTCGACCTCCTAAGAGCCTCGCTGAATTGGACAGCAAgCTAGGAGAAGATGCTGCTGATGGAGCGAGtcaagaggaagaggaaaagtTGGATGACGAAGCGGATGAATTGGATGGCGATGGTAGACGGCGCAGAAAGAGAAAAGTTCCTAAGAGGTTCTCGGAGGCGGTACAGGGCAAAGAACTGGAGAGAATATTCAAGGAAGAAGGCGTTAtagacgacgacgatgacgggCCCGATAACACGGTCGACGATCCCGAGGAACGAGTTAAAGTCCCAACGCCCGATGGTCACGAAGAAATAATTGGACACTTGGAATCCGAAGAGGGCAAAGATTTGGGTGAACTGGTAATAGTCAATCGAGCGAGAGGCCGAGGCCGACCGAAGCTGCGAAGAAGAAAGAACAAATTCCACTGCAACTTGTGCGGCCGTGGTTTTCTCCAGCGAAGCAGATACATTATGCACAAgagTTTTCACAATGGAATAAAGTACCAATGTTCGGAGTGCAAGAAGCAATTCACGAACAAAGAAAATTGCGCGCTGCATCAGAAGACAACGGGCCACAGCGGTTCGGGAATAATCGAGGGCCTCGCGACTGAAGAAGCAAATGTACAGGTGGCCGATGCGAGCCCCGTCGAGTCTGAAAAATCGAGCCCCGAAAAGGTGTCGAGCATCGAAGAACCGAGTGCCGAAGAGACGATTGCGGAAAAATTGGGACCCGAGGAGAATTCGAACCCCGAAACATTGGACCGTGAAAATCCGAATCTCGAAAAAGCGTGTCCCGCCGAAGCCGAGGAAACGCCCAAAGACGCGGAGGACACGCAGGTCGAAGAGAGCAAAGACGAAAGTAGCAGCAACGAGCAGTCGGTAGCGAGGTCGAGCTCACCGGAGACCCAATCTCAGATCGACATGACGAAACCGTTCGACTGCAGACGATGTAAAATATCCTTCGGCTCTAGAAAACTGTTCGAAGGTCATTTGCGAAAAACTCACAACGGCGATAAACCATTCGCTTGCACCTTGTGCAACAAGACGTTCGCTTATCAGGCGGGGTTGCAGGGACACCTGGCCACGCACGagACTTACATGGCAGCAAGATCGAGTTCACCGGAAAGCCAACTTCACGGTGACCACGAGACGAAACCGTTCGACTGCGGACGATGTAAATTATCTTTTGGTACTAAAAAACTGTTCGAGGCACATTTGAGAAATGCTCACAACGGCGAGAAACCGTTTCGTTGCACCGAATGCACCAAGACGTTCGCTTATCGCGCGAGCTTGGAGACACACATGTCCACGCACgtgCGCAAGAAACAGGATAGGGGACAGGGTCACCCTTGCGACATATGCGGCAAAGTATTGAATCATCCGAGCTCTGTGATATACCACAAGGAGGCTGAGCACAACGGTCGTCGCTTCGTCTGCAACAAATGCGGAAAGAGTTTCAAGCACAAACAGCTCTTGCAGCGTCATCAGCTCGTGCACTCGGACGATCGTCCTTACGTGTGCGGTTCCTGCAACGCGAGTTTCAAGACCAAGGCCAATCTGATAAATCATCAGTTCACTCACACCGGTGAGAAGAAGTATTCGTGTGAACTGTGCGGTCAACAATTCGCTCACAAGACCAGTCTGACATTGCACTACAGGTGGCACACGGGACACAAACCGTACTCGTGCGAGGTCTGCAACAAGACTTTTTCACAAAACGGAAATTTGCAGGAACACATGAGAATTCACACAGGCGAGAAGCCTTATAGTTGCGATCATTGCGGTCGAAAGTTCACGACCTCGTCGCAGTTCAAGCTTCACGTCAAACGACACACCGGCGAACGACCGTGGAAGTGCGAATTTTGCGCGAAAACTTTCCTTCATAAAGACACTTGGAAGTGTCACGTTCGGCGGCACAAGGGCGAGCGACCTTTTCAGTGCGCGCATTGCAATCGTGGTTTCACGGAGCAGTGGGCTTTGAAGAAGCATCTTAGACTGCACACTGgcgaaAAACCATACTCTTGTGATGTTTGTGGAAAGGCTTTCGCTGATTGTTCAAATCTCACTAAGCACAAAAAGGTACATCGCGAAAACAAAGTTTTGGGCATCAACGATTTGTCAAAAGCCGCTGCTGGCGGTGAATTGTGGCAAATATTGCCAAACTCGCAGGACGGCGATGAACATTCCCTGGGGGAACATGTGACCCAAGTTTTCGCTGGCGAAGAAACGTCCGAAGACGGAATACCGCAGATTATTTATGTCTCTTATCAAAATCCGGATGATCCTAATCAGAATCGAACATTGCATTTCGTCGACGTAGGCGTGATGGAGGATAAAGAAGGTGGAATAGCGGCAGTGGAGTCAGGGCAGTCGCTGCCAACGCTGGAAGTCGCCGATTCGGATCCAGGTATTGCCAAACGAGCGGTCGAAGAGGTGCAGGAAGATTCTGCGAGGGAGACCGACATGGTGTACGATGAATCGAATATTCATCTGCAGATCACTGACGAGGAGGGCAATCCCATCCCACTCTCGATACAGGACGCCCGACAATTGTTATCCGACGGACGATTCGTCAGTCAGTTGAACGATGGACAAGCGATCAGGATCTCCGACGAACTGGCTCAGCAATTGAACCTTCAAGTTAACCAGAGCGCAGGAATAGAGAGCATCGAATCCACCAGAGATGAGTCCTCGACAGCTGAAACCGACGCTGAGGCAATAGTCAAAGTTTTAGAGGACGAAGATACGGATGCGACGGCTGTTGCGGCGGTTAATCAAATGGCAGGCGAAGCCGAGATAGACGACGGTGCCCAAACGATCGAATTCACGACCCAGGATGGCCAGAAAGTTCGTCTAGTTACGTCCTACCACGTCGATCCGATGCAACTCGCGTCCGAGTACCTGAGCATAGTTTAG
Protein Sequence: MAEVLLYDSAICRLCAEDNGNGELLYAVDGDEQDLSSMVNRYLPIKIRDDGKLPRTICPGCNIQLEATVQFFELLVDGQRKIREMWKQQMEVQRKNERERLRAERENTELAIETPELDNFYTPEGDEQFSQQIIIKIMPDGSMYAAEHDMSLQMEGLDKPRRKRGRPPKSLAELDSKLGEDAADGASQEEEEKLDDEADELDGDGRRRRKRKVPKRFSEAVQGKELERIFKEEGVIDDDDDGPDNTVDDPEERVKVPTPDGHEEIIGHLESEEGKDLGELVIVNRARGRGRPKLRRRKNKFHCNLCGRGFLQRSRYIMHKSFHNGIKYQCSECKKQFTNKENCALHQKTTGHSGSGIIEGLATEEANVQVADASPVESEKSSPEKVSSIEEPSAEETIAEKLGPEENSNPETLDRENPNLEKACPAEAEETPKDAEDTQVEESKDESSSNEQSVARSSSPETQSQIDMTKPFDCRRCKISFGSRKLFEGHLRKTHNGDKPFACTLCNKTFAYQAGLQGHLATHETYMAARSSSPESQLHGDHETKPFDCGRCKLSFGTKKLFEAHLRNAHNGEKPFRCTECTKTFAYRASLETHMSTHVRKKQDRGQGHPCDICGKVLNHPSSVIYHKEAEHNGRRFVCNKCGKSFKHKQLLQRHQLVHSDDRPYVCGSCNASFKTKANLINHQFTHTGEKKYSCELCGQQFAHKTSLTLHYRWHTGHKPYSCEVCNKTFSQNGNLQEHMRIHTGEKPYSCDHCGRKFTTSSQFKLHVKRHTGERPWKCEFCAKTFLHKDTWKCHVRRHKGERPFQCAHCNRGFTEQWALKKHLRLHTGEKPYSCDVCGKAFADCSNLTKHKKVHRENKVLGINDLSKAAAGGELWQILPNSQDGDEHSLGEHVTQVFAGEETSEDGIPQIIYVSYQNPDDPNQNRTLHFVDVGVMEDKEGGIAAVESGQSLPTLEVADSDPGIAKRAVEEVQEDSARETDMVYDESNIHLQITDEEGNPIPLSIQDARQLLSDGRFVSQLNDGQAIRISDELAQQLNLQVNQSAGIESIESTRDESSTAETDAEAIVKVLEDEDTDATAVAAVNQMAGEAEIDDGAQTIEFTTQDGQKVRLVTSYHVDPMQLASEYLSIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00397515;
90% Identity: iTF_00905576; iTF_01364845; iTF_00058128; iTF_00721437; iTF_00059616;
80% Identity: -