Basic Information

Insect: Amblyjoppa proteus
Gene Symbol: -
Assembly: GCA_963922035.1
Location: OY998229.1:12714539-12718030[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.43 41 5.3 4.3 1 23 23 46 23 46 0.96

2 18 1e-06 0.0001 23.0 1.2 1 23 52 74 52 74 0.97

3 18 0.00018 0.017 16.0 2.2 1 23 80 102 80 102 0.97

4 18 2.8e-05 0.0027 18.5 4.2 1 23 137 159 137 160 0.95

5 18 6.2e-05 0.0059 17.4 1.7 1 23 173 196 173 196 0.98

6 18 0.00035 0.033 15.1 0.2 1 23 206 228 206 228 0.95

7 18 6.1e-07 5.8e-05 23.7 0.3 2 23 235 256 235 256 0.97

8 18 9.2e-06 0.00089 20.0 1.1 1 21 262 282 262 283 0.97

9 18 0.017 1.6 9.7 0.7 2 23 326 348 325 348 0.96

10 18 1.9e-05 0.0019 19.0 1.7 1 23 354 377 354 377 0.97

11 18 0.13 12 7.0 0.2 2 23 383 405 382 406 0.95

12 18 0.00012 0.012 16.5 0.1 1 23 410 432 410 432 0.97

13 18 0.0072 0.69 10.9 1.5 2 23 439 461 438 461 0.95

14 18 0.00093 0.09 13.7 2.1 2 23 482 504 482 504 0.96

15 18 0.0024 0.23 12.4 0.1 1 23 515 537 515 537 0.95

16 18 0.0093 0.89 10.6 3.6 1 23 543 565 543 565 0.94

17 18 3.5e-07 3.4e-05 24.5 1.7 1 23 571 593 571 593 0.98

18 18 3.5e-05 0.0034 18.2 0.3 1 21 599 619 599 620 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.43	41	5.3	4.3	1	23	23	46	23	46	0.96
2	18	1e-06	0.0001	23.0	1.2	1	23	52	74	52	74	0.97
3	18	0.00018	0.017	16.0	2.2	1	23	80	102	80	102	0.97
4	18	2.8e-05	0.0027	18.5	4.2	1	23	137	159	137	160	0.95
5	18	6.2e-05	0.0059	17.4	1.7	1	23	173	196	173	196	0.98
6	18	0.00035	0.033	15.1	0.2	1	23	206	228	206	228	0.95
7	18	6.1e-07	5.8e-05	23.7	0.3	2	23	235	256	235	256	0.97
8	18	9.2e-06	0.00089	20.0	1.1	1	21	262	282	262	283	0.97
9	18	0.017	1.6	9.7	0.7	2	23	326	348	325	348	0.96
10	18	1.9e-05	0.0019	19.0	1.7	1	23	354	377	354	377	0.97
11	18	0.13	12	7.0	0.2	2	23	383	405	382	406	0.95
12	18	0.00012	0.012	16.5	0.1	1	23	410	432	410	432	0.97
13	18	0.0072	0.69	10.9	1.5	2	23	439	461	438	461	0.95
14	18	0.00093	0.09	13.7	2.1	2	23	482	504	482	504	0.96
15	18	0.0024	0.23	12.4	0.1	1	23	515	537	515	537	0.95
16	18	0.0093	0.89	10.6	3.6	1	23	543	565	543	565	0.94
17	18	3.5e-07	3.4e-05	24.5	1.7	1	23	571	593	571	593	0.98
18	18	3.5e-05	0.0034	18.2	0.3	1	21	599	619	599	620	0.96

Sequence Information

Coding Sequence: ATGCGGTGTGTGGGCGTCCTTGAATTCGAGAGAACGCGAAGAAGTGGAAAGAAATCTCGTGCGGCTCACAAGTGCGGCAAGTGCAATGGTCGATTCTTCCACATGACGAAGCTGGTGGAGCACCTGAAGAATGTTCACGGAATCGAGCGGGCGTTTCACTGCGACGAGTGCGGCAAAGCCTTCAGGAGTCCGTCGAACATAACGCGTCACAAGCTCATACACACCGGTGTGAAGAAATTCGTCTGCGATATCTGCGGCTGGTCGTGCAATCAGAAGAGCAATTTGGATTTTCATCGGCGTCGTCACACGAAGGATTACGCTTTCAGCTGCGCAGCGTGCGACAAGGGTTTTCTTCTCAAGAGCGAGCACGACGAGCACGTGGAGAACGTGCACACCGGCCGCAAGAAGCATCGATGCGACGTATGCTCGAAGACTTACGGTTACAAGAAAAATTTAACCGCCCATCTGAGGATTCATCATCCGGAACTGATAATGGACGACGTCGCCGCTATAAAGTACACATGCAAGCTGTGCACACGCGGTTTCGTTAACGTTAGACTGCTCAACAATCACATGAAGAAACGACACGGTATAGTGAACCGCAAGATTCGGGAATTTCTTTGCGATCTGTGCGGCACGACATTGTCGTCGAAGAAAGCTCTCGACGCTCACAGAAGAATCCACACGGGCGAAAAGATTGCCAGTTGCGAGATATGCGGCAAAGCCTTTGGCACCAGGGAAAATCTTAAAATTCATCGACGCATTCACACCGGTGAGAAACCGTATCGGTGCAATCAGTGCGGCAAAGATTTTACTCAGAGAACGTCGCTGGTTATTCACCTTCGCCATTGGATGACCAATAACGATCGACATCCCATCAATCCCGACCTGTCGATCAAGACCGAGGATCAAGATATAATAGTCGACGGTATCGAAACATCGCCGAACGCGGAAGAATACGAGGGTAGTCAGAAGAGGTGCGAGCTGTGCGGCGAAAAGTTTCATTTCGTAACGCGGCTTGTGGCGCATCTCCGCATAGCCCACGGTATTCTGAGGCCGTTCAAGTGTCTTGAGTGCGACAAGACCTATCCCCACCAATTTCTTCTGAACGCTCACGTTAAGAAGATCCACACGCCGAAAACCGTGCCCTGCGGTGATTGCGGTTTCATGGGCGTGTCGATGGGTGACGTGGAGAGGCACAGGAAGCGCAATCACCATGTACAGCGTTACATATGCGAGATATGCAGTCAAACCTTTACCGAGGAGTCGTCGCTGGTTACGCACACGGCGATGCACGATTTCATGCAATTTCAGCAGTGTCACGCGTGCGGCAGCACGTTCAACGACGCCCGCACACTGCGGGACCACAATCGTCTCTATCACTACGATCCCGCGGCGGCCAACGACGCCCGTTCCGTAAAGGTAGAGGATAGCCCGGAAAACCGTTGCGAAATATGTAACAAGATATTTAAGTACAAATCGATATTGAAACAGCACAGATCGAGGAGCCACGGTGAGCCGGCGATGTACGAGAAGCGTCGCTATCTGTGCGCCCTCTGCGGCAAGGAGCTCAAGACCGCCAAGGGACTGGAGATACACAACAGGTCGCACACCGGCGAGAAACCTTACACCTGCGAAGTATGCGGCAAGTGTTTCGCCTGCGAGACCCTCCTCCGTACACACAACGTCACACACACGGGAGAACGAAAGTACTCTTGCGACCAGTGCGGCAAATCATTTACTCAGCGTTCGACTCTCGTCGTTCACAAGCGCTATCACTCCGGCGAGAGACCCTACGTATGCACCCGATGCGGCAAGGGTTTCGTCACGCGAACTGTACTCAAAACACACATGAAGTCTTGCCGTCTATAG
Protein Sequence: MRCVGVLEFERTRRSGKKSRAAHKCGKCNGRFFHMTKLVEHLKNVHGIERAFHCDECGKAFRSPSNITRHKLIHTGVKKFVCDICGWSCNQKSNLDFHRRRHTKDYAFSCAACDKGFLLKSEHDEHVENVHTGRKKHRCDVCSKTYGYKKNLTAHLRIHHPELIMDDVAAIKYTCKLCTRGFVNVRLLNNHMKKRHGIVNRKIREFLCDLCGTTLSSKKALDAHRRIHTGEKIASCEICGKAFGTRENLKIHRRIHTGEKPYRCNQCGKDFTQRTSLVIHLRHWMTNNDRHPINPDLSIKTEDQDIIVDGIETSPNAEEYEGSQKRCELCGEKFHFVTRLVAHLRIAHGILRPFKCLECDKTYPHQFLLNAHVKKIHTPKTVPCGDCGFMGVSMGDVERHRKRNHHVQRYICEICSQTFTEESSLVTHTAMHDFMQFQQCHACGSTFNDARTLRDHNRLYHYDPAAANDARSVKVEDSPENRCEICNKIFKYKSILKQHRSRSHGEPAMYEKRRYLCALCGKELKTAKGLEIHNRSHTGEKPYTCEVCGKCFACETLLRTHNVTHTGERKYSCDQCGKSFTQRSTLVVHKRYHSGERPYVCTRCGKGFVTRTVLKTHMKSCRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00414500;
90% Identity: iTF_00058121;
80% Identity: iTF_00058121;