Afus003940.1
Basic Information
- Insect
- Amblyjoppa fuscipennis
- Gene Symbol
- nfxl1
- Assembly
- GCA_963575735.1
- Location
- OY754489.1:679131-682749[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.1 1.3e+04 -3.2 1.1 15 19 125 129 124 129 0.81 2 19 0.21 2.5e+03 -1.0 0.8 4 10 160 166 159 166 0.94 3 19 6.3e-08 0.00074 19.9 16.9 1 19 174 191 174 191 0.99 4 19 4.6e-07 0.0054 17.1 14.8 4 19 230 245 228 245 0.94 5 19 0.0067 79 3.8 15.3 1 19 280 299 274 299 0.90 6 19 4.2e-05 0.49 10.9 9.2 1 18 335 352 335 353 0.97 7 19 0.012 1.4e+02 3.0 8.0 1 12 387 398 387 398 0.94 8 19 1.9 2.2e+04 -4.0 1.3 6 10 408 412 408 412 0.96 9 19 3.6e-07 0.0042 17.5 16.5 1 19 418 436 418 436 0.94 10 19 0.78 9.2e+03 -2.8 0.6 5 10 464 469 464 469 0.90 11 19 0.00051 6.1 7.4 11.5 9 19 484 494 482 494 0.90 12 19 0.00051 6 7.4 6.4 1 12 504 514 504 514 0.95 13 19 0.86 1e+04 -2.9 5.8 14 18 547 551 547 552 0.89 14 19 1.6 1.9e+04 -3.8 0.6 9 12 569 572 569 572 0.77 15 19 0.25 2.9e+03 -1.2 0.4 6 10 578 582 577 583 0.88 16 19 0.00071 8.3 6.9 5.7 1 12 588 599 588 599 0.95 17 19 0.57 6.8e+03 -2.4 1.4 6 10 620 624 619 624 0.88 18 19 4.3e-05 0.51 10.8 12.0 3 19 633 649 632 649 0.92 19 19 3.7e-06 0.044 14.2 9.9 1 16 694 708 694 714 0.86
Sequence Information
- Coding Sequence
- ATGAGAAAATTCAAGAGGGCTCAGGCCCAGAATCAGGCGTCTATAGAGAAACACTTGGAGGCACatccgttggattcgtctagCGAAGATGAAAACGAGACGAACGACGAAGTCTTGCAGGAAGCGGTCACCAAAGTATTGTCATCTTATCAAGGCGAGGGAGGAGATACCGAAAAATCTCTGTCATATCTCACGGATACATTTCAATCTGGAGGTGCCATCTGCCTCATTTGCATCTCTTCTGTTAAAAAAACAGATCCGATATGGAGTTGCTCGACATGTTATTCCTTCATGCATCTCCCATGCATACAACACTGGATACGCGACAGTCTGAGCTACAAGCAAGAGAAGGGAATAACACCTCTGTGGGCCTGCCCAAAATGCCGTATGGAATATCAAGAAGACCAGGTCCCGAAGCACTATCTCTGTTTCTGCGGCCAGACAACGGACCCTCCTTATCAGCCATGGTCGATTCCTCACTCGTGCGGCGAAAAATGCGAGAAACCGCTGCAACCTGCCTGCGGTCACAGATGTGTCCTCCTCTGTCATCCGGGTCCGTGTCCGCCCTGCCCGAAGATGGTACGAATCTCCTGTTTCtgcggtaaacagcccgcacAGCCGCGTCGCTGCAACGCCAAGGAATGGAGCTGCGGAAAGATCTGCGCGAAAAATTTACCGCACTGCGATCACACCTGCAAGGAGGAGTGTCACTCCGGTTCGTGTCCACCCTGCTCCGAAATTCTCTTGGTCCCTTGTCATTGCGCaaacaaaaaggaaaatcGTCTATGCAACGAGGCGAATTGGTTCTGCGACAAGCCCTGCGGCAATCGTCTGTCCTGCAACGTTCACGTTTGCGAGGGAACTTGTCACCGTCCCGGCGAATGCGGCGAGTGTCCTCACGCAAAAAATCGTACTTGTCCCTGTGGCAAAAAACGCTACGACGTCTCCTGTAAGCAGAAGCAAGTTCCCACGTGCGGCGACACGTGCGGAAAGTTGCTCGACTGCGGATCGCACTACTGCAACATGCGCTGCCACACCGATCGTTGCGGACAATGTCTCGAGGTATTGACAAAGACTTGCCGATGTCGCAGCTATGAAAAGGAGATCGCCTGCGCCAAGGAATTTCATTGCAACAAGAAATGCACACAGATGCGACTATGCGGCAAGCATCTTTGCAACAAGAAATGCTGCGACTGCCTCTTGCGAAACAACTTTAACGTTTGCGAGAAGATATGCGACAATACGCTCAATTGTCAGAAACACAAATGTCCGGCGCCCTGTCACAGCGGACCGTGCTATCCCTGCCCAAAGACCAACACGATTCAGTGTCATTGCGGCAAAAGCAAGATCACCGTACCGTGCGGCAGGATAAAGCGCATAAAACCACCTAATTGCAACAAGCTGTGCAAGATACCCCCGGTTTGTCATCATCCGAAGCGGGAGTCGCACAAATGCCATCACGGTCCTTGTCCGCCGTGTCGAAAGATTTGCGCCCTGGTTCACAAAAAATGTGGGCATTCGTGTCCCGCTGTGTGCCACACGAAGGTATGGGTGAAAGTCAAGATCAACGGAGTGAACGCCCAGGTCGCGGGTTCGTTTTTCGAGCCTCAAAAAGAGAGAATGCAGCTCAAGACTCTGCCTTGTCCTCCGTGCGAGGTCTCGGTCATGGTCACCTGTCTCGGAGGTCACGAGACTCTGCCGTGGCCTTGTCACAAAGCTATATCGAATTCCTGTGAGAGACCCTGCGGTCAGTTGCTCGGCTGCACGAATCACAGCTGCGAAATGCCGTGTCACAAAGTTTGGATCCAGCAGAGcgccggtgacggcattgatGAGGAAAGAAAAACTTGTATGGAATGCGAGAGACCATGTGCACTGCCGAGGGCCGCAGGATGCACTCACGCTTGCCCGAGACTGTGCCACAAAGCTCCGTGCTATCCTTGCAAACAGCTTGTCAAAGTATCGTGCCATTGTGGTATAAATTCGCTGTACAAAAGATGCGCTGAACTCACTTCAGCGAGCGCCCAGAAACGGGACGAGTTGCTCAAGTGTGGAAATCAGTGTCCGAAAAACTACGAGTGTGGTCATCGCTGCGTGGAAAATTGCCATTCCGGAGCCTGTCCGAATGCGGAAGCTTGCAGCAAGAGAGTCAAGGTGTGGTGCAAGTGTAAGAGGATCAAGAAAGATTTCCCATGCGTGGTTTTACGGAAAGGAAGCGTAAACGTCGACTGTGACAGCGCTTGCCGTAAGATCAAAGAGGAGCAGGACAGAATTCGAGAGATTGAGATGGCGAGGAAGCGCAAAGAGGATGAAGCGAAAAATCAGATGGAGGTGGAGAGATTCGAAAGGAAATTCAAGCCACGACGGAAGGGCAAGGGGAAGACACAGTTGAGTGATGATTCAAATCAGGGCAGAAATTCTCTTTTCAAGAAAGCTGCAATATTCGCGGTGGTATTGGTTCTGATAGCCGTTGCCGTCTTTTACGCGAGTGAACGAATGTAA
- Protein Sequence
- MRKFKRAQAQNQASIEKHLEAHPLDSSSEDENETNDEVLQEAVTKVLSSYQGEGGDTEKSLSYLTDTFQSGGAICLICISSVKKTDPIWSCSTCYSFMHLPCIQHWIRDSLSYKQEKGITPLWACPKCRMEYQEDQVPKHYLCFCGQTTDPPYQPWSIPHSCGEKCEKPLQPACGHRCVLLCHPGPCPPCPKMVRISCFCGKQPAQPRRCNAKEWSCGKICAKNLPHCDHTCKEECHSGSCPPCSEILLVPCHCANKKENRLCNEANWFCDKPCGNRLSCNVHVCEGTCHRPGECGECPHAKNRTCPCGKKRYDVSCKQKQVPTCGDTCGKLLDCGSHYCNMRCHTDRCGQCLEVLTKTCRCRSYEKEIACAKEFHCNKKCTQMRLCGKHLCNKKCCDCLLRNNFNVCEKICDNTLNCQKHKCPAPCHSGPCYPCPKTNTIQCHCGKSKITVPCGRIKRIKPPNCNKLCKIPPVCHHPKRESHKCHHGPCPPCRKICALVHKKCGHSCPAVCHTKVWVKVKINGVNAQVAGSFFEPQKERMQLKTLPCPPCEVSVMVTCLGGHETLPWPCHKAISNSCERPCGQLLGCTNHSCEMPCHKVWIQQSAGDGIDEERKTCMECERPCALPRAAGCTHACPRLCHKAPCYPCKQLVKVSCHCGINSLYKRCAELTSASAQKRDELLKCGNQCPKNYECGHRCVENCHSGACPNAEACSKRVKVWCKCKRIKKDFPCVVLRKGSVNVDCDSACRKIKEEQDRIREIEMARKRKEDEAKNQMEVERFERKFKPRRKGKGKTQLSDDSNQGRNSLFKKAAIFAVVLVLIAVAVFYASERM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00343554;
- 90% Identity
- iTF_00059860;
- 80% Identity
- -