Basic Information

Insect: Amblyjoppa fuscipennis
Gene Symbol: su(Hw)
Assembly: GCA_963575735.1
Location: OY754493.1:24365531-24369586[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0045 0.41 11.6 0.1 1 20 20 39 20 41 0.95

2 13 7.8e-06 0.00071 20.3 0.5 1 23 119 142 119 142 0.94

3 13 0.0014 0.13 13.2 4.2 2 23 149 171 148 171 0.95

4 13 0.00051 0.047 14.5 2.6 1 20 177 196 177 198 0.95

5 13 5.4e-09 4.9e-07 30.2 1.8 1 23 209 231 209 231 0.99

6 13 3.2e-05 0.0029 18.3 0.8 2 23 241 262 240 262 0.97

7 13 0.0037 0.34 11.8 0.4 2 23 269 290 268 290 0.97

8 13 6.5e-06 0.00059 20.5 4.6 1 23 296 318 296 318 0.99

9 13 1.6e-05 0.0014 19.3 3.5 1 23 324 346 324 346 0.94

10 13 1.1e-05 0.001 19.8 0.8 1 23 352 375 352 375 0.95

11 13 1.2e-07 1.1e-05 26.0 1.3 1 23 381 403 381 403 0.98

12 13 5.5e-08 5e-06 27.0 1.9 1 23 409 431 409 431 0.98

13 13 4.8e-05 0.0044 17.8 2.2 2 23 438 460 437 460 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0045	0.41	11.6	0.1	1	20	20	39	20	41	0.95
2	13	7.8e-06	0.00071	20.3	0.5	1	23	119	142	119	142	0.94
3	13	0.0014	0.13	13.2	4.2	2	23	149	171	148	171	0.95
4	13	0.00051	0.047	14.5	2.6	1	20	177	196	177	198	0.95
5	13	5.4e-09	4.9e-07	30.2	1.8	1	23	209	231	209	231	0.99
6	13	3.2e-05	0.0029	18.3	0.8	2	23	241	262	240	262	0.97
7	13	0.0037	0.34	11.8	0.4	2	23	269	290	268	290	0.97
8	13	6.5e-06	0.00059	20.5	4.6	1	23	296	318	296	318	0.99
9	13	1.6e-05	0.0014	19.3	3.5	1	23	324	346	324	346	0.94
10	13	1.1e-05	0.001	19.8	0.8	1	23	352	375	352	375	0.95
11	13	1.2e-07	1.1e-05	26.0	1.3	1	23	381	403	381	403	0.98
12	13	5.5e-08	5e-06	27.0	1.9	1	23	409	431	409	431	0.98
13	13	4.8e-05	0.0044	17.8	2.2	2	23	438	460	437	460	0.95

Sequence Information

Coding Sequence: ATGGAGAGCACAGCTGgtaacAAGACTGACGGCGATAATCTTGGGATgacgacgaattacgaatgCGTCACGTGTCAGcgcatttttcaaaacaaaaatATGTTGCGGGACCACCTTGACGTCTGCAGAGAGGAGGACGACGGCTCTCACGGCATAGAGTTGAAAGCCTTCGCTCACTACGATTCGGACAATTCTGAAGAATTCGAGGACTCGGATAGCGAAGCTATAAATTCCCGTGTCGACGGCTCCGAAAGCAGTAATAACGCAACGGCCGCGACGCCTATCCAACCAGTAGCGGAACACGAATGCCACTGCTGTGGTGAGGATTTGAAAACGGCTCACAGCGGCGGAAAATTCAAGTGTCCGAATTGCGACCTGTCCTTCAAAAAAAGCACGTCGCTGGAGAGACACTCGATAGTTATTCACTGGGGTATCGAGTCGTGTACGTGCAACGAATGCGGTTCGACGTTTTACGACAAAAAATCGCTGGACAAACATCGTTACACCACCCATTCCAATGCCAAGATTTACAAATGCGAGCCTTGCGACAGATATTTCTCGCGACGGTACCATTTGAATCGTCACAAGTTGCAGTCAGGTTGTCACGGCACGCTAAGAAATTTCTACGAATGTCAAGTGTGCAACAAGTCATTCACGCGGAAGGACAATCTGCGGGAGCATCTGCGAACTCACGCCGGTGTGCAGCAGAGACAACAAAAGTCTTGCGAGCAGTGTTCGAAAAAGTTCAGTACGCCGGGACAACTACTGATACACAGCCGCATGCACAGCGGAGAACGGCCGGTCAAGTGTGACTTGTGTCCAAAGACGTTCCTCTCCGCACTGGCGATGAAGAAACATCGCCGGGTTCACACCGGTGAAAAACCGTTTCAATGCAAACACtgccAACGAAGGTTCGCGGCTCGCGAGACTTTGAATCGCCACCAGCGTACGCACACCGGGGACAGACCGCACGTTTGCCAGCATTGCGGCAAGTCCTTCATTCAGGCCGCTCAGTTGAAAGCTCACGTGTTTCATCACACCGGCGAGAACGGCTTCTACTGCGAGACGTGCGGCAAGGCGTTTAATCGAAAAGCTCGTCTCAATCTTCACATAAAATTCGCTCACGAGGGAGCCGTGCCTTTCCAGTGCAACGTCTGCGAGAAATCGTTCACTCGCAAGGAGGATTTGACAAAGCACACGCTCATTCACACGGGAATAAAACCCCACAAGTGTGACAAATGCGACAAGGCGTTCGCGACGAAGTCATCGCTGCAGGCTCATCTGAACACCCACAGACGCGAACCGCCGCAGTCTTGTGCCGAATGCGGACGCGCTTTCATCCGCCACGATTGCCTGATGAGACACATAAGAGCCAAGCATCGCGAAGTTCTCGAGGATGTTATGGCCGAGGCTGAGAAACGGCAGTTGCAGACTCAACTGCTCGACATAGCATCGTCTGCAGCGCTGAAGATCCAGAACGGAGGATCGAGCGTGCTTTCCTCCGCCCAATTACTAAAGGCTATCGTCGACCTCTTGACCATTCTGATCGAGGAACAAACTTTACAGGTTTTCGGCTGGCCCGAAGCTCCGATTCAAGACGTCTTGGACGCTGTTATCAGACGGTGCGGTCATCAACCGGCGACCGTCGACGACAGCGACCTAACGTTCGAGGATCGATTGCGCGAGAACGTTAAGCTCCTTTTCACCGTTGTCATAGAGGACGATGCGGTAAAATCTCTATTGACGACACAAACTGTCGACGAAGTTATACTGCACGTTTTGAAGATTTCCAATCAGTACGAGCGTATCACGTGA
Protein Sequence: MESTAGNKTDGDNLGMTTNYECVTCQRIFQNKNMLRDHLDVCREEDDGSHGIELKAFAHYDSDNSEEFEDSDSEAINSRVDGSESSNNATAATPIQPVAEHECHCCGEDLKTAHSGGKFKCPNCDLSFKKSTSLERHSIVIHWGIESCTCNECGSTFYDKKSLDKHRYTTHSNAKIYKCEPCDRYFSRRYHLNRHKLQSGCHGTLRNFYECQVCNKSFTRKDNLREHLRTHAGVQQRQQKSCEQCSKKFSTPGQLLIHSRMHSGERPVKCDLCPKTFLSALAMKKHRRVHTGEKPFQCKHCQRRFAARETLNRHQRTHTGDRPHVCQHCGKSFIQAAQLKAHVFHHTGENGFYCETCGKAFNRKARLNLHIKFAHEGAVPFQCNVCEKSFTRKEDLTKHTLIHTGIKPHKCDKCDKAFATKSSLQAHLNTHRREPPQSCAECGRAFIRHDCLMRHIRAKHREVLEDVMAEAEKRQLQTQLLDIASSAALKIQNGGSSVLSSAQLLKAIVDLLTILIEEQTLQVFGWPEAPIQDVLDAVIRRCGHQPATVDDSDLTFEDRLRENVKLLFTVVIEDDAVKSLLTTQTVDEVILHVLKISNQYERIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00414496;
90% Identity: iTF_00058884;
80% Identity: -