Basic Information

Insect: Altica viridicyanea
Gene Symbol: -
Assembly: None
Location: GWHAMMQ00001795:111155-115156[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0099 8 6.6 5.0 10 41 217 244 208 245 0.79

2 15 8.6e-05 0.069 13.2 5.7 2 41 237 272 237 275 0.93

3 15 1.8 1.4e+03 -0.7 3.2 14 41 276 300 272 301 0.81

4 15 0.001 0.81 9.7 4.6 5 41 296 328 292 331 0.84

5 15 0.095 77 3.4 4.1 14 41 332 356 328 358 0.85

6 15 0.0055 4.5 7.4 2.2 17 41 363 384 356 386 0.89

7 15 2.5 2e+03 -1.1 4.2 13 27 387 401 383 411 0.76

8 15 0.0007 0.56 10.3 4.8 4 41 407 440 404 442 0.88

9 15 0.00037 0.3 11.1 5.8 1 41 432 468 432 470 0.94

10 15 0.00099 0.8 9.8 5.5 6 41 465 496 464 497 0.85

11 15 0.00026 0.21 11.6 6.7 1 41 488 524 488 527 0.94

12 15 0.09 72 3.5 3.3 14 41 528 552 524 553 0.84

13 15 0.21 1.7e+02 2.3 0.1 29 41 567 580 560 582 0.77

14 15 0.00058 0.47 10.5 6.4 3 41 574 608 572 610 0.89

15 15 0.00038 0.31 11.1 6.8 1 41 600 636 600 637 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0099	8	6.6	5.0	10	41	217	244	208	245	0.79
2	15	8.6e-05	0.069	13.2	5.7	2	41	237	272	237	275	0.93
3	15	1.8	1.4e+03	-0.7	3.2	14	41	276	300	272	301	0.81
4	15	0.001	0.81	9.7	4.6	5	41	296	328	292	331	0.84
5	15	0.095	77	3.4	4.1	14	41	332	356	328	358	0.85
6	15	0.0055	4.5	7.4	2.2	17	41	363	384	356	386	0.89
7	15	2.5	2e+03	-1.1	4.2	13	27	387	401	383	411	0.76
8	15	0.0007	0.56	10.3	4.8	4	41	407	440	404	442	0.88
9	15	0.00037	0.3	11.1	5.8	1	41	432	468	432	470	0.94
10	15	0.00099	0.8	9.8	5.5	6	41	465	496	464	497	0.85
11	15	0.00026	0.21	11.6	6.7	1	41	488	524	488	527	0.94
12	15	0.09	72	3.5	3.3	14	41	528	552	524	553	0.84
13	15	0.21	1.7e+02	2.3	0.1	29	41	567	580	560	582	0.77
14	15	0.00058	0.47	10.5	6.4	3	41	574	608	572	610	0.89
15	15	0.00038	0.31	11.1	6.8	1	41	600	636	600	637	0.94

Sequence Information

Coding Sequence: ATGGATATTTCTGTCATTAAACAAGAAGAAATAGAAATTGTTGATGAACCAAAACCCGAATTGCATGGTTTCGATCAGATGGAAATTATTCAAGAAGAGCCCTATATAAATAGTATGTTTAAAAAAGAACCGAAATTCCAATACGAAAACTCGCAACAATTCGTAACAGTTGATAATTCTACTAAAAGTGAAATAGATATTTCAGGTCAAACTACTCTTGACATAAATCATGAATTTGAGTGTAAAAAAGAACTATTGCACTCTATTTGCGATTTACCGGACTTTAAAATGGAATTTCAAGATTTTGATAAAGAATTAAATTCAGAGCGACGCATAAAAAGATATTCCAGGAAAAAGGATCCAAGTTGTAATAAGCGTTTTCTATCAGCGGCAAAAAAATGGCAACCTCACTTTGGAAAATTCTATGGAACATGCTCATCTTGTGGAAAATTCTTCTATGATAAATTGCTATTTTTAAACCATTTTTATATTTACCACTTTTCCGTTAATTCGAAAAAATCTGTGAACTTAAAAAGGAATAATTCTGGCACAAAGCATATTAACCGACAAGATCTTAGTAATTTAAACAAACAGATAAGGGCGCACAGTTTCACACAACAAAGTGATTTTAAAAAATATATTAAAACCCATAATGGCGAGAAACCTTTTAAATGTAAATTATGTTCGAAATGTTTCACAAAATCCACTAATTTAAAAAGTCATGTTAGAACTCACACTGACGAGAAACCTTTTAAATGTAAATTTTGTTCGAAATGTTTCACACAATCCAGTAACTTAAAAACTCATATTAGAACTCACACTAACGAAAACCCTTTTAAATGTAAAATTTGTTTGCAATGTTTTACACAATCCAGTCAGTTAAAAGTTCATATTAGAACTCACACTGACGAGAAACCTTTTAAATGTAAAATATGTTCGAAATGTTTCACAGAATCCGGTAATTTAAAAAGACATATTAGAACTCACACTAACGAAAAACTTTTTAAATGTAAGTTTTGTTCAAAATGTTTCACAGAATCCAGTATATTAAATAGACATATTAGAACTCACACTGGCAAAAAACCTTTTAAATGTCAAATTTGTTCGAAATGTTTCACAGATTCCAGTGGATTAAAAAGTCATATTAGAACTCACACTGACGACAAACCTTTTAAATGTAAAATATGTTCGAAATGTTTCACACAATTCGGTCATTTAAAATCTCATATTAGAATTCACACTGGCGAGAAACCTTTTAAATGTAAAATTTGTTCGAAATGTTTCACAGATTCCAGTAATTTAAAAAATCATATTAGAACTCACACTGACGAGAAACCTTTTAAATGTAAGTTTTGTTCAAAATGTTTCACACAATCCAGTACATTAAATAGACATATTAGAACTCACACTGACGAAAAACCTTTTAAATGTAAAATTTGTTCCAAATGTTTCACAGATTCCAGTAATTTAAAAAATCATATTAGAACTCACACTGACGAGAAACCTTTTAAATGTAAAATATGTTCGAAATGTTTCACACAATCCGGTAATTTAAAAAGACATATTAGAACTCACACTAACGAGAAACCTTTTAAATGTAAGTTTTGTTCAAAATGTTTCACAGAATCCAGTATATTAAATAGACATATTAGAACTCACACTGGCAAAAAACCTTTTAAAGGTAGAATTTTTTCGAAATGTTTCTCAGATTCCAGTGGATTAAAAAGTCATATTAGAACTCACACTGACGAGAAACCTTTTAAATGTAAAATTTGTTCGAAATGTTTCACAGATTCCAGTAATTTAAAAAATCATATTAGAACTCACACTGACGAGAAACTTTTTAAATGTAAGTTTTGTTCAAAATGTTTCACACAATCCAGTACATTAAATAGGCATATTAGAACTCACACTGACGAAAAGCTTTTTAAATATAAAATTTGA
Protein Sequence: MDISVIKQEEIEIVDEPKPELHGFDQMEIIQEEPYINSMFKKEPKFQYENSQQFVTVDNSTKSEIDISGQTTLDINHEFECKKELLHSICDLPDFKMEFQDFDKELNSERRIKRYSRKKDPSCNKRFLSAAKKWQPHFGKFYGTCSSCGKFFYDKLLFLNHFYIYHFSVNSKKSVNLKRNNSGTKHINRQDLSNLNKQIRAHSFTQQSDFKKYIKTHNGEKPFKCKLCSKCFTKSTNLKSHVRTHTDEKPFKCKFCSKCFTQSSNLKTHIRTHTNENPFKCKICLQCFTQSSQLKVHIRTHTDEKPFKCKICSKCFTESGNLKRHIRTHTNEKLFKCKFCSKCFTESSILNRHIRTHTGKKPFKCQICSKCFTDSSGLKSHIRTHTDDKPFKCKICSKCFTQFGHLKSHIRIHTGEKPFKCKICSKCFTDSSNLKNHIRTHTDEKPFKCKFCSKCFTQSSTLNRHIRTHTDEKPFKCKICSKCFTDSSNLKNHIRTHTDEKPFKCKICSKCFTQSGNLKRHIRTHTNEKPFKCKFCSKCFTESSILNRHIRTHTGKKPFKGRIFSKCFSDSSGLKSHIRTHTDEKPFKCKICSKCFTDSSNLKNHIRTHTDEKLFKCKFCSKCFTQSSTLNRHIRTHTDEKLFKYKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00057383;
90% Identity: iTF_00057383;
80% Identity: iTF_00057383;