Avir013283.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- Sub1
- Assembly
- None
- Location
- GWHAMMQ00000604:182260-183430[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-25 4.9e-21 73.9 0.6 1 50 42 91 42 92 0.98
Sequence Information
- Coding Sequence
- ATGCCTAAACATAAGAAAAACGATACTTCTGACTCTGATTCAGGACCTGATGATGTTGGTCCAGCAAAGAAAAATGTAAAAACCGAATCAAAATCATCATCTAGAGGAGAAGACGAAACTTCATGGAGTTTAGGAAAGAACCGTTTCTTGAAATTAACCGAATTCAAGAATTCATGGTACATTGATATCAGAGAGTTTTATAACGCTGATGGAGATCTAAAACCGGGTAGAAAAGGAATAATGCTTACTATGGATCAGTGGCAAAAAATGAAAGGATGTATGGATGAAATCGATGAAGCTATTAAAAAACATGTTTAA
- Protein Sequence
- MPKHKKNDTSDSDSGPDDVGPAKKNVKTESKSSSRGEDETSWSLGKNRFLKLTEFKNSWYIDIREFYNADGDLKPGRKGIMLTMDQWQKMKGCMDEIDEAIKKHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -