Basic Information

Insect: Alsophila aescularia
Gene Symbol: -
Assembly: GCA_946251895.1
Location: CAMIUG010001713.1:146043-157420[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.00036 4.3 8.5 0.1 21 51 530 559 521 562 0.86

2 22 0.0047 56 4.9 0.1 23 51 574 601 570 604 0.85

3 22 0.0047 56 4.9 0.1 23 51 616 643 612 646 0.85

4 22 0.00083 9.9 7.3 0.1 21 51 657 686 653 689 0.87

5 22 0.00038 4.6 8.4 0.1 21 51 700 729 696 732 0.87

6 22 0.0047 56 4.9 0.1 23 51 744 771 740 774 0.85

7 22 0.00044 5.2 8.2 0.1 21 51 785 814 781 817 0.87

8 22 0.0047 56 4.9 0.1 23 51 829 856 825 859 0.85

9 22 0.00044 5.2 8.2 0.1 21 51 870 899 866 902 0.87

10 22 0.0047 56 4.9 0.1 23 51 914 941 910 944 0.85

11 22 0.00044 5.2 8.2 0.1 21 51 955 984 951 987 0.87

12 22 0.0044 53 5.0 0.1 23 51 999 1026 995 1029 0.85

13 22 0.00018 2.2 9.4 0.2 23 51 1041 1068 1037 1071 0.85

14 22 0.00018 2.2 9.4 0.2 23 51 1083 1110 1079 1113 0.85

15 22 0.077 9.2e+02 1.0 0.1 23 52 1125 1153 1122 1155 0.83

16 22 0.00036 4.3 8.5 0.5 4 51 1148 1195 1145 1198 0.76

17 22 0.0021 25 6.1 0.2 21 52 1209 1239 1205 1241 0.87

18 22 0.00083 9.9 7.3 0.2 21 51 1252 1281 1246 1284 0.87

19 22 0.00083 9.9 7.3 0.1 21 51 1295 1324 1291 1327 0.87

20 22 0.0047 56 4.9 0.1 23 51 1339 1366 1335 1369 0.85

21 22 0.00083 9.9 7.3 0.1 21 51 1380 1409 1376 1412 0.87

22 22 0.0047 56 4.9 0.1 23 51 1424 1451 1420 1454 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.00036	4.3	8.5	0.1	21	51	530	559	521	562	0.86
2	22	0.0047	56	4.9	0.1	23	51	574	601	570	604	0.85
3	22	0.0047	56	4.9	0.1	23	51	616	643	612	646	0.85
4	22	0.00083	9.9	7.3	0.1	21	51	657	686	653	689	0.87
5	22	0.00038	4.6	8.4	0.1	21	51	700	729	696	732	0.87
6	22	0.0047	56	4.9	0.1	23	51	744	771	740	774	0.85
7	22	0.00044	5.2	8.2	0.1	21	51	785	814	781	817	0.87
8	22	0.0047	56	4.9	0.1	23	51	829	856	825	859	0.85
9	22	0.00044	5.2	8.2	0.1	21	51	870	899	866	902	0.87
10	22	0.0047	56	4.9	0.1	23	51	914	941	910	944	0.85
11	22	0.00044	5.2	8.2	0.1	21	51	955	984	951	987	0.87
12	22	0.0044	53	5.0	0.1	23	51	999	1026	995	1029	0.85
13	22	0.00018	2.2	9.4	0.2	23	51	1041	1068	1037	1071	0.85
14	22	0.00018	2.2	9.4	0.2	23	51	1083	1110	1079	1113	0.85
15	22	0.077	9.2e+02	1.0	0.1	23	52	1125	1153	1122	1155	0.83
16	22	0.00036	4.3	8.5	0.5	4	51	1148	1195	1145	1198	0.76
17	22	0.0021	25	6.1	0.2	21	52	1209	1239	1205	1241	0.87
18	22	0.00083	9.9	7.3	0.2	21	51	1252	1281	1246	1284	0.87
19	22	0.00083	9.9	7.3	0.1	21	51	1295	1324	1291	1327	0.87
20	22	0.0047	56	4.9	0.1	23	51	1339	1366	1335	1369	0.85
21	22	0.00083	9.9	7.3	0.1	21	51	1380	1409	1376	1412	0.87
22	22	0.0047	56	4.9	0.1	23	51	1424	1451	1420	1454	0.85

Sequence Information

Coding Sequence: ATGGATTTCTCAGCCATTTGCCGGATTTGTACTGGTACAAAATTTTTGAATCCAATTTACAAAGATGAGGACGACTACATCCGATATTCTACGGCCGTGTTTATTACTACAGGATTAAAGGTGGACCTACATGATGGATTACCGCAACAAATGTGCAGAAACTGCATTAAATTCGTGAATGACTCACTGAAATTCAGAAAACAATGCAAAGATACTGAAATACACCTTTTAGAAATAAAAAACAGCAAAACAGTTTCAGCATGCGGCAAATTATTGAAAAATATAGAGCAATCCATTTTGAAAAGAAAAAGATCAACTGACAGTAGAAAAAGTGATAGTATATATATCAAAATTGAAGAATGTACATCTGAAAATGATGATGGATCTTTGAAAACACTTCAAAAATATACCGCCGAAGAAAATATCAAAATAGAAACTCACTACATAAAAAATTACTATGAAACAAATACAAACGATTCCATTGAGAGTTCAATCAAAACTGATTTAGACAAAGAAGAGTCCACACAGAAAACAAATAACACTGATGAATTAAAACACGAAGATGAATACTTGGATGACCAATTTGAATCAAACCCCGAAAGCGGACATTTAGCTACATATATCAATGATACAGCCTCAAACCCAGTCAAATTTACAAATGCCGTTACTTACACTGCCACCACACCACCACCACTTATTTCTCCAGGAACTAATGAAAGCAATTTAGATACGAGGTCAGTCACAAATTCAGAAGAATTTTTAGGCAATGGTACGAATAAGTCCAACTTAAAAATACATAAAAACAATTTGGCTTTGTATATCAATGATGATGATACGGCCTCAAAATCTGTAAAAGTTTTAAATGGCGTTACTTATACTGCCACCACACCACCACCGCTTATAATCACAGAAAGTAATGAAAGCAATTCAGATACAAGTTCAGTCACAAATTCAGAACAATTTTTAAGCAATGTTATGAATAAGTCCAACTCAAAAAGAAATAGAAACAGTTTGGTTTCGTATATCAAAGACACGGTCACAAATTCAGAGGAATCCAACAACGTTACAAATGCAGATATACCTTTTATAATACGTGACTCGAATCGAGTGACATGTAAGTTATGTCAGAAGGACCTGTCAAAGAGGAGTATAGATTTGCACATTTCAAAGAGACATCCGGGCGCAGATACGAGGAAGGTGAAGTGTGATTTGTGTGATACGTATGTGATCAAGCAAAGGTTGAAACGACACAGGATTAAAATGCATGGCAGGGATTGTTTCCGTTGTGGGTATTGCAAGACCGAGTTCGACAGCAGAGCCGTGTTACTAGCCCACGTGCCAACCTGCACCGCCAAGAAGAGGAAACGGCAAGCTACTGACAAGGCAAGCCTTTTTGTTTACTTTTTATATAAATTCATTATTAAGTACAATTTCCCTAAAGAGGATGCTCTTACGATTTCAGAGAAAAGAAAAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTCAGAGGAAGGAGCAGAAGGTGGAGTGCGACGTGTGCCACACAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTTAACCTTTGTAAGAAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTTAACCTTTGTAAGAAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTACAATTTCAGAGGAAGGAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTACAATTTCAGAGGAAGGAGCAGAATGTGGAGTGCGACGTGTGCCACACAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTTAACCTTTGTAAGAAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTACAATTTCAGAGGAAGGAGCAGAAGGTGGAGTGCGACGTGTGCCACACAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTTAACCTTTGTAAGAAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTACAATTTCAGAGGAAGGAGCAGAAGGTGGAGTGCGACGTGTGCCACACAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTTAACCTTTGTAAGAAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTACAATTTCAGAGGAAGGAGCAGAAGGTGGAGTGCGACGTGTGCCACACAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTTAACCTTTGTAAGAAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATACCGGCAAGGGGCCCGTATGCGAGGTAACACACTTTAACCTTTGTAAGAAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCGGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTTAACCTTTGTAAGAAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCGGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGTGAGGTAACACACTTTAACCTTTGTAAGAAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAAGAGGCGAGTCTGCGGCTGCACCAGAAGATCAAACATGCCAGCAAGGGGCCCGTATGCGAGGTAACACACTTACAATTTCAGAGGAAGGAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTACAATTTCAGAGGAAGGAGCAGAAGGTGGAGTGCGACGTGTGCCACACAACTATGCAACAGGCGAGTCTGCGGCTGCACCAGAAGATCAAACATGCCAGCAAGGGGCCCGTATGCGAGGTAACACACTTACAATTTCAGAGGAAGGAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTACAATTTCAGAGGAAGGAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTTAACCTTTGTAAGAAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTACAATTTCAGAGGAAGGAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTTCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTTAACCTTTGTAAGAAGCAGAAGGTGGAGTGCGACGTGTGCCACAAAACGATGCAACAGGCGAGTCTGCGGCTGCACCAGGAGATCAAACATGCCGGCAAGGGGCCCGTATGCGAGGTAACACACTTACAATTTCAGAGGAAGTAG
Protein Sequence: MDFSAICRICTGTKFLNPIYKDEDDYIRYSTAVFITTGLKVDLHDGLPQQMCRNCIKFVNDSLKFRKQCKDTEIHLLEIKNSKTVSACGKLLKNIEQSILKRKRSTDSRKSDSIYIKIEECTSENDDGSLKTLQKYTAEENIKIETHYIKNYYETNTNDSIESSIKTDLDKEESTQKTNNTDELKHEDEYLDDQFESNPESGHLATYINDTASNPVKFTNAVTYTATTPPPLISPGTNESNLDTRSVTNSEEFLGNGTNKSNLKIHKNNLALYINDDDTASKSVKVLNGVTYTATTPPPLIITESNESNSDTSSVTNSEQFLSNVMNKSNSKRNRNSLVSYIKDTVTNSEESNNVTNADIPFIIRDSNRVTCKLCQKDLSKRSIDLHISKRHPGADTRKVKCDLCDTYVIKQRLKRHRIKMHGRDCFRCGYCKTEFDSRAVLLAHVPTCTAKKRKRQATDKASLFVYFLYKFIIKYNFPKEDALTISEKRKEGGVRRVPQNDATGESAAAPGDQTCRQGARMRGNTLQRKEQKVECDVCHTTMQQASLRLHQEIKHAGKGPVCEVTHFNLCKKQKVECDVCHKTMQQASLRLHQEIKHAGKGPVCEVTHFNLCKKQKVECDVCHKTMQQASLRLHQEIKHAGKGPVCEVTHLQFQRKEQKVECDVCHKTMQQASLRLHQEIKHAGKGPVCEVTHLQFQRKEQNVECDVCHTTMQQASLRLHQEIKHAGKGPVCEVTHFNLCKKQKVECDVCHKTMQQASLRLHQEIKHAGKGPVCEVTHLQFQRKEQKVECDVCHTTMQQASLRLHQEIKHAGKGPVCEVTHFNLCKKQKVECDVCHKTMQQASLRLHQEIKHAGKGPVCEVTHLQFQRKEQKVECDVCHTTMQQASLRLHQEIKHAGKGPVCEVTHFNLCKKQKVECDVCHKTMQQASLRLHQEIKHAGKGPVCEVTHLQFQRKEQKVECDVCHTTMQQASLRLHQEIKHAGKGPVCEVTHFNLCKKQKVECDVCHKTMQQASLRLHQEIKHTGKGPVCEVTHFNLCKKQKVECDVCHKTMQQASLRRHQEIKHAGKGPVCEVTHFNLCKKQKVECDVCHKTMQQASLRRHQEIKHAGKGPVCEVTHFNLCKKQKVECDVCHKTMQEASLRLHQKIKHASKGPVCEVTHLQFQRKEQKVECDVCHKTMQQASLRLHQEIKHAGKGPVCEVTHLQFQRKEQKVECDVCHTTMQQASLRLHQKIKHASKGPVCEVTHLQFQRKEQKVECDVCHKTMQQASLRLHQEIKHAGKGPVCEVTHLQFQRKEQKVECDVCHKTMQQASLRLHQEIKHAGKGPVCEVTHFNLCKKQKVECDVCHKTMQQASLRLHQEIKHAGKGPVCEVTHLQFQRKEQKVECDVCHKTMQQASLRLHQEIKHAGKGPVCEVTHFNLCKKQKVECDVCHKTMQQASLRLHQEIKHAGKGPVCEVTHLQFQRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00055630;
90% Identity: iTF_00055630;
80% Identity: iTF_00055630;