Aaes000604.1
Basic Information
- Insect
- Alsophila aescularia
- Gene Symbol
- -
- Assembly
- GCA_946251895.1
- Location
- CAMIUG010000022.1:826199-838672[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.4e-11 3.1e-08 34.2 0.0 4 39 176 212 173 216 0.89 2 3 4.1e-11 2.9e-08 34.2 0.3 2 39 228 265 227 268 0.92 3 3 5.7e-09 4e-06 27.4 0.7 2 30 283 311 282 312 0.94
Sequence Information
- Coding Sequence
- ATGCCCGGGAACGGACCGTTTCAGGTGAAATGTGAGCCACCTTCAGACGAGGAAGATAACAGTCCACAACTATCCGACTTAACATTTCTCAAAATAAAGCTTCCCTCTGAATACTACTGTTTAAAAGTAGAAGAAACGATTGGACAGAATGATGAAAGCACATCATCAGATTTGTTGCATCATTTACAGTCTGCGGGTGGTCTGGAGGAGCTGGCACCGCTGGCGCCGGCGGGGCCTGCCGCGACCCCAGTCTGCGTGAAGCAGGAGCCCGCGGAGACCCCGGCCCTCACGCTCGAGACCCTCGAGTCTGCTCCGCATGCCACGGGCTGTTTACTATTGGAAAGGCACATGGCGATGCTGAATTCGAGTGAAGAACTTGATTCTGCTGATTTTACGCCACTACTTATAAAGGAAGAACCTTCATCAGAAGGAGAGCCACAGCTCATGAGCAGTGACGAGACTAGTGACCCGTACCGCGACACTGAGCCAGCCGCACGAGGCAGTCCAAAGAGCTGGACGCAGCAAGATATGGACCACGCGCTCGACGCGCTCAGGAACCACAATATGAGCTTGACCAAGGCTTCGGCAACGTACGGCATTCCGTCCACGACACTCTGGCAGCGTGCGCACCGGCTTGGTATCGACACGCCGAAGAAGGAAGGCAGTGCTAAGTCCTGGTCTGAAGCCGACCTGCGTGGCGCCCTACACGCGCTGAGGGCTGGTGCCATCTCCGCCAACAAGGCTAGCAAAGCTTACGGCATCCCGAGCAGCACTCTGTACAAGATAGCCCGGCGTGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCAGCGCCAGTGTCGTGGCGTCGCGGGGACCTGGCGCGCGCGCTCGCCGCCATCCGCGCCGGCGCCGCTTCCGTGCAGCGCGCCGCCGCGCAGTACGGGATCCCCACCGGTGGGTCATTGTGA
- Protein Sequence
- MPGNGPFQVKCEPPSDEEDNSPQLSDLTFLKIKLPSEYYCLKVEETIGQNDESTSSDLLHHLQSAGGLEELAPLAPAGPAATPVCVKQEPAETPALTLETLESAPHATGCLLLERHMAMLNSSEELDSADFTPLLIKEEPSSEGEPQLMSSDETSDPYRDTEPAARGSPKSWTQQDMDHALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVSWRRGDLARALAAIRAGAASVQRAAAQYGIPTGGSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00935599;
- 90% Identity
- -
- 80% Identity
- -