Amod096269.1
Basic Information
- Insect
- Allygus modestus
- Gene Symbol
- -
- Assembly
- GCA_963675035.1
- Location
- OY776116.1:7540005-7548029[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 1.2e-05 0.013 18.3 0.0 7 72 20 88 16 100 0.84 2 8 2.7 3e+03 1.1 0.0 47 69 98 118 85 136 0.77 3 8 4.2 4.6e+03 0.4 0.0 47 69 131 151 112 153 0.77 4 8 0.002 2.2 11.2 0.0 21 76 184 237 178 249 0.82 5 8 3.1 3.3e+03 0.9 0.0 48 69 242 263 230 266 0.76 6 8 0.0031 3.4 10.5 0.0 20 71 293 342 289 353 0.85 7 8 1.4 1.5e+03 2.0 0.0 49 71 353 375 342 384 0.76 8 8 5e-06 0.0055 19.5 0.1 48 104 385 443 373 447 0.84
Sequence Information
- Coding Sequence
- ATGGCGACTCAGAACCCAGCAGAGGAAGAGCCAGAATTCATCTCCTTCTTGTTTTCATCAAAACTGGAACATGATTGTTTCTTCTTGGTGGGCAGCCAAACGCCAATGGTAGCTGAGAGAATCGGCGTGGTGAAGGCGATGCTGATGGCCCACAGTGTGGTCCTGCGACTGGAGCTGGAGGACAGCAAGTTGGCCGACAAGAGAGAAGTGCCAGTCCCTGACGTCTACCCTGACACCTTCAGAATCCTCCTCAGTGTGGTCCTGAGACTGGAGCTGGAGGACAGCAAGTTGGCCGACAAGGGAGAAGTGCCAGTCCCTGACGTCTACCCTGACACCTTCAGAATCCTCCTCAGTGGGGTCCTGCCTCTGGAGCTGGAGGACAGCAAGTTGGCTGACAAGGGAGAAGTGCCAGTCCCTGACATCTACCCTGACACCTTCAGAATCCTCCTCAGCTTGAGGACAGCAAGTTGGCTGACAAGGGAGAAGTGCCAGTCCCTGACGTCTACCCTGACACCTTCAGAATCCTCCTCAGGTCTGTTGTACTTGCAGGAGAGAATCGGCATGGTGAAGGCGATGCTCATGGCCCACAGTGTGGTCCTGAGACTGGAGCTGGAGGACAGCAAGTTAACCGACAAGGGAGATGTGCCAGTCCCTGACATCTACCCGGACACCTTCAGAATCCTCCTCAGTGTGGTCCTGAGACTGGAGCTGGAGGACAGCAAGTTAGCCGACAAGGAAGAAGTGGCTTTCCCTGACATCTACCCGGACACCTTCAGAATCCTCCTCAGGTCTGTTCTACTTGCAGGAGAGAATCAGCGTGGTGAAGGAAATGATGATGGCGCACAGTGTGGTCCTGAGACTGGAGCTGAAGAACAGCAAGAGAGAATCGGCGTGGTGAAGGAGATGCTGATGGCCCACAGTGTAGTCCTGAGACTGGAGCTGGAGGACAGCAAGTTAGCCGACAAGGAAGAAGTGGCTTTCCCTGACATCTACCCGGACACCTTCAGAATCCTCCTCAGTGTAGTCCTGAAACTGGAGCTGGAGGACAGCAAGTTAGCCGACAAGGAAGAAGTGGCTTTCCCTGACATCTACCCGGACACCTTCAGAATCCTCCTCAGTGTGGTCCTGAGACTGGAGCTGGAGGACAGCGAGTTAGCCGACAAGGAAGAAGTGGCTTTCCCTGACATCTACCCGGACACCTTCAGAATCTTCCTCAGGTACGTGTACGGAAATGACACAACAGCTGCTCTGTGCTTCTATGAAGCTGATAGTCTGCTCTTCATTGCGGAGAAATTCAAGATGAGCACGTTGAAGAAGAAACTCGCTACTCGACTGATGTCGCTCCTCAACACCGAGAACATCTGTTCGCTGCTCAACAACCCGGTTTGCTACACACAGCTCGAGCTCAACAGTGCCATCACCGAGATCCTCCGCTGTGAGACGGACAGTGTCCTGGCCAGTCCGTTGTTTCTCGGACTCACTCCCACTGGTTTTATCAAAATCCTGGAGCAAGACGCCTCGAATGTGCCCGAAATAGAGCTCGGGAGAGCCATGATCAAGTGGGCTAAACACAATGCTGATTCAGAAGATGGGGAAGCTTTGTGGACACAAATTTCAAAACTGACCAAACATGTCAGGGTTTGCACCTTAAATAGTGATCAGTTCCGTCACGAAATGGTGCCTTCAGAGGTCTTGACTAAGGATGAAGTGGCATTGGTCTGCATGTCTATCAGGCGACAAGAGAAACTAGAACGCCTGACAGAGATTTGTAATGAAATCAAACCACGTAGCTTGCCTCAGAAGAAAGAGAAACCAGCCGAGTCAGTGAAGAAACCGTTTGAATTGAAGTTCACGAACCATAACAGAATTTTCCATAGTGCAACAGAGTTCAACTTTGTCGTTATCACAAATAAGTCTGATATTGAGCTGCTGCCTTTGGAATGTCCAGCAGTCCGTCGCCCCAAGAACAAGAAGATTGCATTAGATGCAATGCTTGACGTCAGCTGTACAACAACAATAACACGAATCACTGACCATCAGGATAACACCTCAACTGAGACTCCAATAACTGTCAGGTTCAACCAGCAAGTTGAGTACGGGACGACATTCATGATCCCTCTCACCAGTGGAGGACACAATGTGACTCTGCGTGCCTACAACAGGTACACCTTCAGGATGGTGTTCGGTGGATATCAGCCACTGTATGTCGACTGGCCTGAGGCACATCGTTATTTCAACGACCATTTGACGCTGCTCATCCGACCCTGTGAAACTCTTGAAGATGAATATAGGCACCGTGTGCCCATGAATGCCTTGAACAGCTCACTGCCAGACCGGCGGCTAGGAGGTGACGACAGGCAGAGGCTGCCAGTGGCTCCAGGTACGGATGAGGTTGTACAGCCTCTCTCCAGGACACTCGGTGTCGCGTGCTTGCCTGTGGCCGATCAGCTGATAGTCGGTGCGGATGTGGCTGAATACAGAGGTTCATGGTAG
- Protein Sequence
- MATQNPAEEEPEFISFLFSSKLEHDCFFLVGSQTPMVAERIGVVKAMLMAHSVVLRLELEDSKLADKREVPVPDVYPDTFRILLSVVLRLELEDSKLADKGEVPVPDVYPDTFRILLSGVLPLELEDSKLADKGEVPVPDIYPDTFRILLSLRTASWLTREKCQSLTSTLTPSESSSGLLYLQERIGMVKAMLMAHSVVLRLELEDSKLTDKGDVPVPDIYPDTFRILLSVVLRLELEDSKLADKEEVAFPDIYPDTFRILLRSVLLAGENQRGEGNDDGAQCGPETGAEEQQERIGVVKEMLMAHSVVLRLELEDSKLADKEEVAFPDIYPDTFRILLSVVLKLELEDSKLADKEEVAFPDIYPDTFRILLSVVLRLELEDSELADKEEVAFPDIYPDTFRIFLRYVYGNDTTAALCFYEADSLLFIAEKFKMSTLKKKLATRLMSLLNTENICSLLNNPVCYTQLELNSAITEILRCETDSVLASPLFLGLTPTGFIKILEQDASNVPEIELGRAMIKWAKHNADSEDGEALWTQISKLTKHVRVCTLNSDQFRHEMVPSEVLTKDEVALVCMSIRRQEKLERLTEICNEIKPRSLPQKKEKPAESVKKPFELKFTNHNRIFHSATEFNFVVITNKSDIELLPLECPAVRRPKNKKIALDAMLDVSCTTTITRITDHQDNTSTETPITVRFNQQVEYGTTFMIPLTSGGHNVTLRAYNRYTFRMVFGGYQPLYVDWPEAHRYFNDHLTLLIRPCETLEDEYRHRVPMNALNSSLPDRRLGGDDRQRLPVAPGTDEVVQPLSRTLGVACLPVADQLIVGADVAEYRGSW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -