Amod035697.1
Basic Information
- Insect
- Allygus modestus
- Gene Symbol
- -
- Assembly
- GCA_963675035.1
- Location
- OY776111.1:525325807-525330778[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 8.3e-09 9e-06 28.5 0.0 5 69 31 99 28 106 0.92 2 6 0.32 3.5e+02 4.1 0.0 38 69 99 130 97 131 0.78 3 6 0.0015 1.6 11.6 0.0 33 69 129 165 127 166 0.90 4 6 0.00016 0.17 14.7 0.1 33 76 164 207 162 210 0.88 5 6 0.0011 1.2 12.0 0.0 33 69 199 235 197 237 0.89 6 6 0.00076 0.82 12.5 0.0 33 70 234 271 232 272 0.89
Sequence Information
- Coding Sequence
- ATGAAGTACAGTCCGGAAGACGGGATGGTCAGATTGTGGACTAGCGGAATGTACAGATTGACTACAAAAGGAGACCCTGCAGATTTTCTCCTATCCAATGCCAAGTACCATGACTGTCATCTCACCGTTGGTAATCCTACGACTGGCCAAGAAAGGATTGGAGTGTCATCCACACAACTGATAGCTCACAGCTCCGTCTTCAGAGACATGTTGGCAGACAGTAAACTGGCAGATCCATCAGGCTCCAACACCCACATCAAAGATGTTTCTCCTGCTACGTTCAAACTGATGCTGAGAGACATGTTGGCAGACAGTAAACTGGCAGATCCATCAGGCTCCAACACCCACATCAAAGATGTTTCTCCTGCTACGTTCAAACTGATGCTGAGCTCCGTCTTCAGAGACATGTTGGCAGACAGTAAACTGGCAGATCCATCAGGCTCCAACACCCACATCAAAGATGTTTCTCCTGCTACGTTCAAACTGATGCTCAGCTCCGTCTTCAGAGACATGTTGGCAGACAGTAAACTGGCAGATCCATCAGGCTCCAACACCCACATCAAAGATGTTTCTCCTGCTACGTTCAAACTGATGCTCAGCTCCGTCTTCAGAGACATGTTGGCAGACAGTAAACTGGCAGATCCATCAGGCTCCAACACCCACATCAAAGATGTTTCTCCTGCTACGTTCAAACTGATGCTCAGCTCCGTCTTCAGAGACATGTTGGCAGACAGTGAACTGGCAGATCCATCAGGCTCCAACACACACATCAAAGATGTTTCTCCTGCTACGTTCAAACTGATGCTCAGGACTTGTGCCGGGATGTGTGCCGGCACATGTGCTCGAAGTTTGTTTAAATGGAAACGGTCTGGAACACGTCCCGGCACAAGTACCGGGGAGAAAAATGTGCCAGTGGACCGTGGGACACATCATGTGCGACACTGTGGGATATGTGCTACGGAAAATGGAAACAGGCTGCAACTTGTTTCCCCGGGACATTCGCATGCGCAGGAGCCGGGAGCCGACCAGCGGTCAGTCTACACTGCTGCACTCTCTGTCCGTCAAATTCTTGTACAAATTCATGAACGGATTGTAGGCTCGTTCTGA
- Protein Sequence
- MKYSPEDGMVRLWTSGMYRLTTKGDPADFLLSNAKYHDCHLTVGNPTTGQERIGVSSTQLIAHSSVFRDMLADSKLADPSGSNTHIKDVSPATFKLMLRDMLADSKLADPSGSNTHIKDVSPATFKLMLSSVFRDMLADSKLADPSGSNTHIKDVSPATFKLMLSSVFRDMLADSKLADPSGSNTHIKDVSPATFKLMLSSVFRDMLADSKLADPSGSNTHIKDVSPATFKLMLSSVFRDMLADSELADPSGSNTHIKDVSPATFKLMLRTCAGMCAGTCARSLFKWKRSGTRPGTSTGEKNVPVDRGTHHVRHCGICATENGNRLQLVSPGHSHAQEPGADQRSVYTAALSVRQILVQIHERIVGSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -