Amod096628.1
Basic Information
- Insect
- Allygus modestus
- Gene Symbol
- -
- Assembly
- GCA_963675035.1
- Location
- OY776116.1:14761863-14778790[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.027 29 7.5 0.0 30 71 2 41 1 53 0.83 2 10 1.7 1.8e+03 1.7 0.0 49 76 52 79 43 89 0.75 3 10 0.00057 0.62 12.9 0.0 26 72 163 207 154 218 0.85 4 10 1.5 1.6e+03 1.9 0.0 47 73 217 241 204 253 0.74 5 10 1.8 1.9e+03 1.7 0.0 47 71 250 272 236 282 0.74 6 10 1.4 1.5e+03 2.0 0.0 47 76 283 310 270 318 0.73 7 10 1.4 1.6e+03 2.0 0.0 47 72 316 339 303 350 0.73 8 10 1.3 1.4e+03 2.1 0.0 47 69 349 369 336 371 0.75 9 10 0.0036 3.9 10.3 0.0 23 69 449 493 443 495 0.88 10 10 1e-09 1.1e-06 31.4 0.0 23 104 573 654 569 658 0.90
Sequence Information
- Coding Sequence
- ATGCTGATGGCGCACAGTGTGGTCCTGCGACTGGAGCTGGAGGCAAACAAGTTGGCCGACAAGAGAGAAGTGCCAGTCCCTGACATCTACCCGGACACCTTCAGAATCCTCCTCAGTGTGGTCCTGCAACTGGAGCTGGAGGACAGCAAGTTGGACGACAAGAGAGAAGTGCCAGTCCCTGAAATCTACCCGGACACCTTCAGAATCCTCCTCAGTGTGGTCCTGCGACTGGAGCTGGAGGACAGCGAGTTGGACGACAAGGGAGAAGTCCCAGTGAGAATcggcttggtgaaggcgatgctCATGGCTCACAGTGTGGTCCTGAGACTGGAGCTGGAGGACAGCGAGTTGGACGACAAGGGAGAAGTCCCAGTGAGAATcggcttggtgaaggcgatgctCATGGCTCACAGTGTGGTCCTGAGACTGGAGCTGGAGGACAGCGAGTTGGCCGACAAGGGAGAAGTCCCAGTGAGAATCGGCTTGGTGAAGGCAATACTCATGGCTCACAGTGTGGTCCTGCGACTGGAGCTGGAGGACAGCGAGTTGGCCGACAAGGGAGAAGTCCCAGTCCCTGACATCTACCCGGACACCTTCAGAATCCTCCTCAGTGTGGTCCTGCGACTGGAGCTGGAGGACAGCGAGTTGGCCGACAAGGGAGAAGTCCCAGTCCCTGACATCTACCCGGACACCTTCAGAATCCTCCTCAGTGTGGTCCTGCGACTGGAGCTGGAGGACAGCGAGTTGGCCGACAAGGGAGAAGTCCCAGTCCCTGACATCTACCCGGACACCTTCAGAATCCTCCTCAGTGTGGTCCTGCGACTGGAGCTGGAGGACAGCGAGTTGGCCGACAAGGGAGAAGTCCCAGTCCCTGACATCTACCCGGACACCTTCCGAATCCTCCTCAGTGTGGTCCTGCGACTGGAGCTGGAGGACAGCGAGTTGGACGACAAGGGAGAAGTCCCAGTCCCTGACATCTACCCGGACACCTTCCGAATCCTCCTCAGTGTGGTCCTGCGACTGGAGCTGGAGGACAGCGAGTTGGCCGACAAAGGAGAAGTCCCAGTCCCTGACATCCACCCAGACACCTTCAGAATCCTCCTCAGGTCTGTTGTACTTGCAGTGTGGTCCTGCGACTGGAGCTGGAGGACAGCGAGTTGGCCGACAAGGGAGAAGTCCCAGTCCCTGACATCTACCCGGACACCTTCCGAATCCTCCTCAGGTCTGTTGTACTTGCAGGTGAGAATCGGCGTGGTGAAGGCGATGCTCATGGCTCACAGTGTGGTCCTGCGACTGGAGCTGGAGGACAGCGAGTTGGCCGACAAGGGAGAAGTCCCAGTGAGAATCGGCGTGGTGAAGGCGATGCTCATGGCTCACAGTGTGGTCCTGCGACTGGAGCTGGAGGACAGCGAGTTGGCCGACAAGGGAGAAGTCCCAGTCCCTGACATCTACCCGGACACCTTCAGAATCCTCCTCAGGTCTGTTGTACTTGCAGTGTGGTCCTGCAACTGGAGCTGGAGGACAGCGAGTTGGCCGACAAGGGAGAAGTCCCAGTCCCTGACATCTACCCAGACACCTTCAGAATCCTCCTCAGGTCTGTTGTACTTGCAGGTGAGAATCGGCGTGGTGAAGGCGATGCTCATGGCTCACAGTGTGGTCCTGCAACTGGAGCTGGAGGACAGCGAGTTGGCCGACAAGGGAGAAGTCCCAGTGAGAATCGGCGTGGTGAAGGCGATGCTCATGGCTCACAGTGTGGTCCTGCAACTGGAGCTGGAGGACAGCGAGTTGGCCGACAAGGGAGAAGTCCCAGTCCCTGACATCTACCCGGACACCTTCCGAATCCTCCTCAGATACGTCTACGGGCATGACACAACAGCTGCTCTGTGCTTCGATGAAGCTGATAATCTACTCTACGTGGCGGAGAAGTACATGATGGGCACGTTGAAGAAGAAACTCGCCACTCGACTTATGTCGCTCCTCAACACTGAGAACATCTGTTCGCTGCTCAACAACCCGGCTTGCTACACACAGCTTGAGCTCAACAGCTCCATCACAGAGATCCTCCGCTATGAGACAGACAGAGTCCTGGCCAGTCCGTTGTTTCTCGGACTCAGTCCCGATGGTTTTGTCAAAATCCTGGAGCAAGACGGCCTGAATGTGCCTGAAATAGAGCTCTGGAGAGCCATGATGAAGTGGGGCAAACACAATGCTAATTCAGGAGATGGGAAAACTGTGAGAAAACAAGTTTCAAAATTGACTGAACACATCAGAGTCTGCAGCTTGGATACCCTACAGTTATGCCAAGAAGTGGCGCCTACAGATGTCTTGACTGGTGATGAATTGGCATTGGTCTGCAAGTCTGTCGGACAACAAGAAAAGCAAAGTGGTCTGACAAGCATTTGTAATGATATAAAACCCCGCTTCTTGCTTGAAAAGAAAAATGTGCCACAATTGGAAAAGAAACAGTTTGAGTTGAAATTCATAAATCATGAGGGCACTGATGTGCAACTAGAGTTTAACTTCACAGTTGACACAAAGCAGTGTGATATTGAGCTGCTGCCTGTGGAATGTCCAGCACTAGTGGACTTCAGGAGGCATCCAGGATGGGCAACTTATGAGGTCAGCTGTACAACAACAATAACACGAATCACTGACTATCAGAATGGCACCTCAACTGAGACTCCAGTAACTGTCAGGTTCAACCAGCGAGTTGAGTACGGGACAACATTCATGATCCCTCTCACCAGTGGAGGACACAACGTGACTCTGCTACCCAACAACAGGTACACCTTTAGGATGGTGTTTGGTGGAGCTCAGCCGATGTATTATGACAAGTCTCCCTCGCCGTTTTATGACAACAGTCACTTGTCACTGATGATCAAACCTGATGGTCAAGCTAGTTCAGAAGACGGGAAAGCTGTAAGGAAACAAGTTTCAAAATTGACTAAACACATCAGAGTCTGCAGCTTGGATTATGCTCAGTTATGTCAAGAAGTGGTGCCTACCGATGTCTTGACTGATAAGGAAGTGGTATTGGTCTGCAAATCAGTTGGGAAACAAGAACAACAAACTGGTCTGACAagcatttgtaataaaataaaaccacgTGCCTTGCTTCAGAAGAAACAGAATGTTTCACAATCAGAAAAGAAAGAGTTTCAGTTGAAGTTCGTCAATCATTGGCTTTCTTCTGAGTCTTATAATAGCTTTCCTCCTGAGTCTTATAATAGCTTTTCTCCTGAGTATGTGCTGAGGAAGTTTAACTTCACAGTTGTCACAAAGAAGTGTGCTATTGAGCTGCTGCCTTTGGAATGTTCAGCACCCCACCTCTACTGGGTGACTCCAGAAGGTCCAACTCACGAGGTCAGCTGTACAACAACAATAACACGAATCACTGACCATCAGGATAACACCTCAACTGAGACTCCAGTAACCGTCAGGTTCAACCAGCAAGTTGAGTACGGGACAACATTCATGATCCCTCTCACCAGTGGAGGACACAACGTGACTCTGCGTGCCAACAACAGGTACACCTTCAGGATGGTGTTTGGTGGAGCTCAGCCAGTGTATTGGGACAGGCCTCGCACACCTGTGTATGACAACAGCCATTTGTCACTGATCATCAAACCTGATAAATACGTTACCCACCCTGTGCCTATGAAAGGCTTTAAGTACAAAGCGACTGATGCTTAG
- Protein Sequence
- MLMAHSVVLRLELEANKLADKREVPVPDIYPDTFRILLSVVLQLELEDSKLDDKREVPVPEIYPDTFRILLSVVLRLELEDSELDDKGEVPVRIGLVKAMLMAHSVVLRLELEDSELDDKGEVPVRIGLVKAMLMAHSVVLRLELEDSELADKGEVPVRIGLVKAILMAHSVVLRLELEDSELADKGEVPVPDIYPDTFRILLSVVLRLELEDSELADKGEVPVPDIYPDTFRILLSVVLRLELEDSELADKGEVPVPDIYPDTFRILLSVVLRLELEDSELADKGEVPVPDIYPDTFRILLSVVLRLELEDSELDDKGEVPVPDIYPDTFRILLSVVLRLELEDSELADKGEVPVPDIHPDTFRILLRSVVLAVWSCDWSWRTASWPTREKSQSLTSTRTPSESSSGLLYLQVRIGVVKAMLMAHSVVLRLELEDSELADKGEVPVRIGVVKAMLMAHSVVLRLELEDSELADKGEVPVPDIYPDTFRILLRSVVLAVWSCNWSWRTASWPTREKSQSLTSTQTPSESSSGLLYLQVRIGVVKAMLMAHSVVLQLELEDSELADKGEVPVRIGVVKAMLMAHSVVLQLELEDSELADKGEVPVPDIYPDTFRILLRYVYGHDTTAALCFDEADNLLYVAEKYMMGTLKKKLATRLMSLLNTENICSLLNNPACYTQLELNSSITEILRYETDRVLASPLFLGLSPDGFVKILEQDGLNVPEIELWRAMMKWGKHNANSGDGKTVRKQVSKLTEHIRVCSLDTLQLCQEVAPTDVLTGDELALVCKSVGQQEKQSGLTSICNDIKPRFLLEKKNVPQLEKKQFELKFINHEGTDVQLEFNFTVDTKQCDIELLPVECPALVDFRRHPGWATYEVSCTTTITRITDYQNGTSTETPVTVRFNQRVEYGTTFMIPLTSGGHNVTLLPNNRYTFRMVFGGAQPMYYDKSPSPFYDNSHLSLMIKPDGQASSEDGKAVRKQVSKLTKHIRVCSLDYAQLCQEVVPTDVLTDKEVVLVCKSVGKQEQQTGLTSICNKIKPRALLQKKQNVSQSEKKEFQLKFVNHWLSSESYNSFPPESYNSFSPEYVLRKFNFTVVTKKCAIELLPLECSAPHLYWVTPEGPTHEVSCTTTITRITDHQDNTSTETPVTVRFNQQVEYGTTFMIPLTSGGHNVTLRANNRYTFRMVFGGAQPVYWDRPRTPVYDNSHLSLIIKPDKYVTHPVPMKGFKYKATDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -