Amod084845.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Allygus modestus
Gene Symbol
tfip11
Assembly
GCA_963675035.1
Location
OY776114.1:127968902-127995991[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-94 7.3e-90 304.0 21.2 1 275 393 660 393 660 0.97
2 2 0.19 1.1e+04 -1.7 0.0 244 265 674 695 664 703 0.62

Sequence Information

Coding Sequence
atgtCTGATGATGAAGTGGAAGCGTTTGACATTACAGATGAAGATCTTAACCGGGCTTTTAATCCTGGAGCAAGAAGGTTcagaggaaattctaaaaatCAGCAAATTTATGGCATGTGGGCGGATGACAGTGGGGATGAAGGACCCAGTCAGAGATCAGGATTCGGTAAAGCTAGAAAGCCGAAGAATTACAGCGCACCTGTCAACTTTGTTGCCGGTGGAGTTCACCAAGCAGGTAAAAAGAAGGAGAAAGAAATTGAGGataagaaagaagaagaagatgaTGATCAAGAAAGAAGGGTATTTGATGTGGACTCAAGTGAATCAAGTGAAGAAGATGAACCAAGAGCTTCTTTTAGTAACTTGTCAATGAATATTCAAGGAGAAATTGCAGGACTGCGGCAAAAGAAATCTCAGTTCAACCCTACCCTTGCCAAAAAAGGAGTGGGTAAATGGGAGCAGCATACAAAAGGCATTGGAGCAAAATTGCTCCTTCTGATGGGATATGAACCTGGTAAAGGTCTAGGAAAAGATTTACAAGGTATTCAGGCTCCCATTGAAGCTAGCTTGAGGAAAGGAAGAGGTGCAATTGGCGCTTACGGTCCAGAAAAAGGTCAAAAGATCGCTGACTTAGATGGTGAAAAGAAAAAGAAAGAGAAAGAACCCGTTAAGAGTGATAAAGTATCCCAGTGGCGGAAAGAAGACGGCTCGAGTAAAAAGCAGAAAGTGCAGTATGTTTACAAAAGCATTGAGGATGTCTTGGAAGAAAGCAAGCAGCCTGGACGGAAGAAGAAAAGAGAGTTTAACGAGCTGAGCAAGGTGAAGGTGATTGACATGACGGGTCCGGAGCAGCGAGTGCTGTCGGGCTACCACGCCATCTCCAGTGTGCAGCGGCCGTCCGAGCAGTGGGAGATCCGTAAGGACAAGAGGTTCACCAACTTCGAGCTCCCAGAACTCCAGCATAACCTGAACCTCCTGGTGGAAATGTCTGAGGAGGCGATCGTGTCGAACGACCGGAAGTTGCAGTACGCCGAGAACCGTTGCGTGGCGCTGGAGGCGGAGGTGGAGACGCTGACCAGGCAGGAGCGGCAGGAGGCGGAGACGATAGAGGTGCTGGACCGGGTGATGTTGGTGGTGCTGCGGCTGGTGTCGGGGGCCGAGGACAACACGCTCACACTGCAGGAGGCCTCCCAGGCGTTCCGGGAATTGCAGGAGAAGTACTACCTGGAGTATTGCGTGTACGAGGTGTGGTCGCTGGCGGACACGGTGGTGCGGCCGCTGTTCAAGGACTACCTGTCGGCGTGGGCCCCGCTGCAGGATCCTGCTACGCCGGTGGAGGTGTTCCGGCAGTGGCGCACCATCCTGGAGCAGGACCAGACGCTGACGGCCAGTGCTGCACAGGACCCCTACCACAAGCTGCTGTGGGACACGTGGATGCCGTGCGTCCGCATCGCCGTCAGTGCTTGGCAGCCGAGGAAGTTTGAGCCGATGGTGGAGTTTGTGGAGACGTGGAAGCCGCTGGTGCCCGCCTGGACGATGGACAACGTGCTGCAACAGCTGATCCTGCCGCGGCTACACCATGAGGTCGAGGAGTGGAACCCCCTCACCGACACCATCCCCATACACACCTGGATCCACCCCTGGCTGCCTCTGCTGGGGAAGTACCTGAACACAACGATATTCCCGGTGATCCGCCACAAGCTGGCAGCGGCGCTGGTGTCGTGGCACCCATCCGACTGCTCAGCGCGGCTCATGCTGCGGCCGTGGGTCGGCGTGTTCAGCAAGGGCGAGATGGACGCGTTCCTCATCAACAACATCGTGCCCAAGCTCCACCTCACCCTGCAGGAGTTTGTCATCAACCCGCACCAGCAGCATTTGGACAACTGGAACTGGGTGATGGAGTGGCAGGAGCTGTTGTCGTCCCATGTGCTCGCCTCTCTGCTGGACAAGAGCTTTTTCCCCAAGTGGCTGCAGGTGCTCACACTGTGGCTCAACCTCAACCCCAACTATGACCAGGTTACCAACTGGTACACCGGCTGGAAGAGCGTACTGCCCGAGTCACTCCTCAACGAACCAGTGGTAAAAGAACACCTGAGGTCAGCCCTGGAGCTGATGAGCCGATCGGTGGGAGGAGGCCCGGCCCCCCAGCCCACGCCACAGGAGACGGCCCAGGCCCAGGCCCGCTACCAGGGCCTGGCGGAGTGTATCAAGACGACGCAGCAGGTCCCGCAGCAGTTCAAGGACCTGGTGCAGAAGCGGTGCGAGGAGCTGGGCGTGGTCTGGGTGCCGCTGCCCAACCGCTACCGCGAGGCCAAGCAAGTCTACAAGTGCGGCAAGCTGCAGGTCTACATCGATCGCAACGTGTTGTTCGTGTGCAACGGCGGACAGTGGGAACCGACCTCACTCAACGCCCTGTTGGAGATGGCGATGTAG
Protein Sequence
MSDDEVEAFDITDEDLNRAFNPGARRFRGNSKNQQIYGMWADDSGDEGPSQRSGFGKARKPKNYSAPVNFVAGGVHQAGKKKEKEIEDKKEEEDDDQERRVFDVDSSESSEEDEPRASFSNLSMNIQGEIAGLRQKKSQFNPTLAKKGVGKWEQHTKGIGAKLLLLMGYEPGKGLGKDLQGIQAPIEASLRKGRGAIGAYGPEKGQKIADLDGEKKKKEKEPVKSDKVSQWRKEDGSSKKQKVQYVYKSIEDVLEESKQPGRKKKREFNELSKVKVIDMTGPEQRVLSGYHAISSVQRPSEQWEIRKDKRFTNFELPELQHNLNLLVEMSEEAIVSNDRKLQYAENRCVALEAEVETLTRQERQEAETIEVLDRVMLVVLRLVSGAEDNTLTLQEASQAFRELQEKYYLEYCVYEVWSLADTVVRPLFKDYLSAWAPLQDPATPVEVFRQWRTILEQDQTLTASAAQDPYHKLLWDTWMPCVRIAVSAWQPRKFEPMVEFVETWKPLVPAWTMDNVLQQLILPRLHHEVEEWNPLTDTIPIHTWIHPWLPLLGKYLNTTIFPVIRHKLAAALVSWHPSDCSARLMLRPWVGVFSKGEMDAFLINNIVPKLHLTLQEFVINPHQQHLDNWNWVMEWQELLSSHVLASLLDKSFFPKWLQVLTLWLNLNPNYDQVTNWYTGWKSVLPESLLNEPVVKEHLRSALELMSRSVGGGPAPQPTPQETAQAQARYQGLAECIKTTQQVPQQFKDLVQKRCEELGVVWVPLPNRYREAKQVYKCGKLQVYIDRNVLFVCNGGQWEPTSLNALLEMAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-