Basic Information

Insect: Alloplasta piceator
Gene Symbol: -
Assembly: GCA_946863875.1
Location: OX333074.1:56343978-56349042[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00027 0.035 15.3 3.9 1 23 257 279 257 279 0.98

2 11 0.51 67 4.9 11.8 2 23 286 307 285 307 0.91

3 11 6.2e-05 0.0081 17.3 6.6 1 23 313 335 313 335 0.99

4 11 0.00043 0.056 14.6 1.6 1 23 341 363 341 363 0.95

5 11 1.3e-06 0.00017 22.5 1.9 1 23 369 391 369 391 0.97

6 11 2.8e-05 0.0037 18.3 1.1 1 23 397 419 397 419 0.97

7 11 8.1e-05 0.011 16.9 1.6 1 23 424 446 424 446 0.97

8 11 4.5e-05 0.0059 17.7 0.0 1 23 452 474 452 474 0.96

9 11 4.2e-05 0.0056 17.8 0.2 2 23 486 507 485 507 0.96

10 11 1.6e-05 0.0021 19.1 1.8 3 23 576 596 574 596 0.96

11 11 4.6e-05 0.006 17.7 4.6 1 23 606 628 606 628 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00027	0.035	15.3	3.9	1	23	257	279	257	279	0.98
2	11	0.51	67	4.9	11.8	2	23	286	307	285	307	0.91
3	11	6.2e-05	0.0081	17.3	6.6	1	23	313	335	313	335	0.99
4	11	0.00043	0.056	14.6	1.6	1	23	341	363	341	363	0.95
5	11	1.3e-06	0.00017	22.5	1.9	1	23	369	391	369	391	0.97
6	11	2.8e-05	0.0037	18.3	1.1	1	23	397	419	397	419	0.97
7	11	8.1e-05	0.011	16.9	1.6	1	23	424	446	424	446	0.97
8	11	4.5e-05	0.0059	17.7	0.0	1	23	452	474	452	474	0.96
9	11	4.2e-05	0.0056	17.8	0.2	2	23	486	507	485	507	0.96
10	11	1.6e-05	0.0021	19.1	1.8	3	23	576	596	574	596	0.96
11	11	4.6e-05	0.006	17.7	4.6	1	23	606	628	606	628	0.96

Sequence Information

Coding Sequence: atgtgcaccacgccgggcaacgCGGGCGCCGGTTTCGGCTACGCCTGGTCATTCGGCGGACCGGGCAACGAATCGAGGGAAAACGCGCAGGCCGAATTGGCGAGTAACATTAATTACGCGGTTAACAATAATCAGGATCAGGGCTCGGGTCAGAAGATACAGGTCGACATTAAACCCGCTAAGGTGGCGATAAGCGCTACTCCGAGGAGACCGATGTTCGCGATGAACGAATCGTGCCAGCAGCAGACGCCGCCGACGACGACGACGACCCATCACGGACAGAGCAGCGGAGGCGGCGCGGTTCACAATCAAACACACGTACGAAACAAGAAGCATCACGACGTATTTTCCTTAACCTGCGACAAGGGAGGTTGTAACTGCGACGCAGCTCATCCCACTCCTCCGCCCTCACTATTCTCAAATGCCCTTGTTTTTACCACAGCCGACAAGCACGCTATGAGCAAACACTTTATGACGCCTCTGGGACCTTTGCAGCTTACCGCGGAGGAGTGCAACGAGATACTGATGAAGAGAGCCGCGGCCGCGTCGACCAATCAGACGAATTCCAACAACGTCACACCTGGACAGACCAGCGACGGAGGAGGCGGCGGCGGAGGCGGAGGTGGCGCTGGCGGCGGCGGCGGCGGCGGCGGCGGGACGCACTTCGGTCACGTCCTGACCCACGTTAACGCGGGACAGATCGAACTTTCCAAGACGAAGCAGCagcaggacatggggagccaggttcgcgttcccaaggaacgaccttactcttgctcggaatgcggcaagtcatttctccttaagcatcatctgacgacacacgcgcgtgttcacacgggcgagagacctcacatatgcattcactgtggcaaaacattcgcccacaaacattgtcttcacactcatctgttgcttcacagcgccgaacgaccttatcagtgtcgtgagtgcaaaaaatcattcaccctgaagcatcatctcgtaacgcacacgcgtgtacacacgcgcgagcgacctttcgtttgccaagagtgcggacgggcttttccattgaagcgtcatctagtaacgcacagtaaatttcactcgggcgaacggccattcgtttgcgaggaatgcggcgaatctttctcaCAGAAGGATCATCTCACGATGCACTCGCGCTTCCACGGTAGTCTGCATCCTTTCGTTTGTCACGATTGCGGCGCCACGTTTCAGAGGAAATTCGAGCTCGTCAATCACGGACGTCTTCACGGACGCGTGCCACACTCCTGTACCGtttgcggcaaggaattcctacagaagaggaccctcctcgcacacatgcgtctgcacaccggcgaaactccattcgcttgcaccgtttgcggcgaggctttTCCTCGCAAAGTCGAACTCGTCGCGCACTCCAAGATACACAACAATAATACCAATCCCGATGAGAAGTGCCTCACGTGCAGAGAATGCGGTTTGGACTTTTCGAATCGGGAGGCATTGACGTTACATCTGAGGTTACACTCGGGCGATCGTACACTCGTTACCGATCTCTGTGGTCTCGCGGCCGCCTTTCAGCAAACACCCGGACACTTTTTAACACCGAACGCATCCGGCACGCATCAGATGAACGGACCCCTCGGTGCTCCCGGTGTAAGTCACATGCACGGTGCCGCGACGCAAACGTCGCCGCCGGTTTGCTCGGGACCGAAACCAAAGCCGCATCTTTGTCCTGATTGCGGTCGTGGTTTTGCCCAAAAGCACGGTCTGGGACAGCATCAGAGAAGACACACGGACGGAAGTTGTCACATAAGATCGCACATTTGCGACAAATGCGGCAAGGCGTTCTTTCAGAAGAACCATTTGTTgctgcatcagcgtcagcacatggatccaccgccgagtatattgcgacagcaacagagacaagcggctcaggccgcggcgcaacaggcgcagcaacaacaacaacaacaacaacaagttgggcaagcggggacgcagcaacaacaggcccaacaggttcaacaacaggcccaacaagttcaacaacaacagcagcagcaagtgcatcagcaaacgcagcagcaacaaccgcagcagcaacaacaacaaccgcagcaacaaacgtgcacggtagatacgaaatccatacagttgcaggcgatacaacagcaggttcagcaacaggtgcagcaacaagttcagcaacaggttcaacaacaacagcaacaacaacaacaacaacagcagcagcagcagcagcaagcgtgctcggtggacacaaaagcaatacagttgaacgtcACCATGTGA
Protein Sequence: MCTTPGNAGAGFGYAWSFGGPGNESRENAQAELASNINYAVNNNQDQGSGQKIQVDIKPAKVAISATPRRPMFAMNESCQQQTPPTTTTTHHGQSSGGGAVHNQTHVRNKKHHDVFSLTCDKGGCNCDAAHPTPPPSLFSNALVFTTADKHAMSKHFMTPLGPLQLTAEECNEILMKRAAAASTNQTNSNNVTPGQTSDGGGGGGGGGGAGGGGGGGGGTHFGHVLTHVNAGQIELSKTKQQQDMGSQVRVPKERPYSCSECGKSFLLKHHLTTHARVHTGERPHICIHCGKTFAHKHCLHTHLLLHSAERPYQCRECKKSFTLKHHLVTHTRVHTRERPFVCQECGRAFPLKRHLVTHSKFHSGERPFVCEECGESFSQKDHLTMHSRFHGSLHPFVCHDCGATFQRKFELVNHGRLHGRVPHSCTVCGKEFLQKRTLLAHMRLHTGETPFACTVCGEAFPRKVELVAHSKIHNNNTNPDEKCLTCRECGLDFSNREALTLHLRLHSGDRTLVTDLCGLAAAFQQTPGHFLTPNASGTHQMNGPLGAPGVSHMHGAATQTSPPVCSGPKPKPHLCPDCGRGFAQKHGLGQHQRRHTDGSCHIRSHICDKCGKAFFQKNHLLLHQRQHMDPPPSILRQQQRQAAQAAAQQAQQQQQQQQQVGQAGTQQQQAQQVQQQAQQVQQQQQQQVHQQTQQQQPQQQQQQPQQQTCTVDTKSIQLQAIQQQVQQQVQQQVQQQVQQQQQQQQQQQQQQQQQACSVDTKAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01509061;
90% Identity: iTF_01056261;
80% Identity: -