Basic Information

Insect: Alloplasta piceator
Gene Symbol: -
Assembly: GCA_946863875.1
Location: OX333074.1:567858-573054[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.5e-06 0.00032 21.7 1.7 1 23 316 338 316 338 0.98

2 9 2.3e-08 3.1e-06 28.0 1.6 3 23 346 366 344 366 0.98

3 9 0.00018 0.024 15.8 0.4 1 23 372 394 372 394 0.98

4 9 1e-06 0.00013 22.9 1.5 1 23 400 422 400 422 0.99

5 9 1.8e-05 0.0023 19.0 1.7 2 23 544 565 543 565 0.96

6 9 2.3e-09 3e-07 31.2 1.6 1 23 571 593 571 593 0.98

7 9 0.00052 0.068 14.4 0.6 3 23 601 621 599 621 0.97

8 9 6.8e-05 0.009 17.1 1.4 1 23 627 649 627 649 0.99

9 9 0.015 2 9.7 0.8 1 23 655 679 655 679 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.5e-06	0.00032	21.7	1.7	1	23	316	338	316	338	0.98
2	9	2.3e-08	3.1e-06	28.0	1.6	3	23	346	366	344	366	0.98
3	9	0.00018	0.024	15.8	0.4	1	23	372	394	372	394	0.98
4	9	1e-06	0.00013	22.9	1.5	1	23	400	422	400	422	0.99
5	9	1.8e-05	0.0023	19.0	1.7	2	23	544	565	543	565	0.96
6	9	2.3e-09	3e-07	31.2	1.6	1	23	571	593	571	593	0.98
7	9	0.00052	0.068	14.4	0.6	3	23	601	621	599	621	0.97
8	9	6.8e-05	0.009	17.1	1.4	1	23	627	649	627	649	0.99
9	9	0.015	2	9.7	0.8	1	23	655	679	655	679	0.95

Sequence Information

Coding Sequence: ATGTTCCAGCAAATAGACAGGTATACTGGCGCGCCATACGTGTTGTACAAGGACAATATGGAGAGGCCCCAGGGTCAATGGGCCCCGggaccaggagctctccaggatggcggactttacgctcagcaacaacaacagcagcagcagcaacaacaacagcagcagcagcagcagcagcaacaacaacaacaacagcaacaacagcaacaacaacaacaacagcaacaacagcagcagcagcagcaacaacagggttcttcgacgtcgggcagtccacagcaggcatgtggtccaccggtcgagggtgaaacgggtccacctccgacgttagcatctccggttgcatcgccgtatccatcagcggcaccggaaccgcagtctctatccccgccggacgatgacatacaatcgaatcaatcgaccgcccagcagcagcagcagcaacaacaacaacaacaacagcaagtgcaacaacaacaacagcaacaacaacaacagcaagtgcaacaacaacagcaacaacaagtgcaacagcaacaggttcaacaacaagtacaacagacgcaacaacagcagcaacagcaacaacagcaagagcattcgccgcagcaacagttgacgcctcacgaggtcgaaagaaccgattgTTTTCCCGGCGCTGCTGATCTGCAACAATATCCTCAGCATTATTTCAAAGAGGCGAGACCTCATCCTTCACCGTCGGTGCCACCTCACATGCTCACACCCGGTGGTTTTTCCGCTCTTCATTATCTCAAACAGCCCGGTGTGATGTTAACGTCGCTCGGTCAGGGTGACGGTGGACCTACCCTCGATGCTCATCAGTACGGTAGTCCGGGTGGACCCAACATGACCGCGACCGGTTTGCCCGATATCGTTCAACAAAATGGAAAATCTTCGAAAGGAGCCAACAGCGATTTGCGATTATTCAAgtgtcttacctgcggtaaagattttaaacaaaaatcaactttactgcagcacgagaggattcacacggacagtcgaccgtacggttgtccggaatgtggcaaacgcttcaggcaacaatcgcatctgacccagcatctacgaatacacgctaacgagaagccatacgcttgcgtttactgcgagcgtacgtttcgtcaacgcgccatcctcaatcagcatctgcgcatccactcgggtgagaagccataccaatgtccggagtgcggaaaacacttccgtcagaaggcgatcctgaatcagcacgtccgcacacaccaagACGTGAGTCCTCATCTGATATTCAAAAACGGAATGACGCCGACGCTTTGGCCGCAGGACGTGCCGTTTCCACCGGAGGAGGGAAAGGAGGAGGTGGCATCGACTTTCGGTGACGGTGATACACAGTCAGGGGCATTCAGTCCTTCGCCCGATGGCAATTCGATCCAGTATCCCGCGTATTTCAAGGATCCGAAAGGTGGTAATCACGGTGTATTCGGCGCGGGTGGACCAAGCAGTTTCGGTGCGCTGCAGTACATAAAGCAGCAACAGGGAGGAGCGGGTGCCGGATCGGCGGGTGGAAAATCTTGTCTTCCCGATGTAATACAGCACGGACGTTcggcgggtatgccgctttacgtacgttgtccgatatgtcagaaggagttcaagcaaaagagtacgttacttcagcacggttgcatacacatagaatcgcgaccttatccttgtccggagtgcggcaagagattccgtcaacagtcacacttgacgcaacatttgcgcatacacacgaacgaaaaaccatacggttgcgtctactgcgggcgtaatttccgtcagagaacgatacttaatcaacatttgcgcatacacacgggtgagaagccatacaagtgtcaacagtgcggtaaggattttcgtcaaaaagctatattggatcagcacacgagaacgcatcaaggtgatcgaccattttgttgtccaatgccgaattgcaggcgacgcttcgccaccgagcccgaggtcaagaaacacatcgacaatcacatgaatccgcacGCTTCGAAGGCACGAAGAAATTCAAACAGCGATACTAAACCGCCAAACACACCGACGGGCCTGGGACCGGTGTCCGTTCCGAGGGGTCTAACGCCAACGGTCGTCAAGCCCGAATTATACTTTCCACAGTGTTACGCGCCGGCTTTCAATCATCATCCGCCCGTATCGAGCTCACAATTTCCCGTGTCACAGACGAACGGTGGTGTTGCCGTCAGCGGTGAATTTAAACCACCAACGGGACTACCGCCTCAGTGA
Protein Sequence: MFQQIDRYTGAPYVLYKDNMERPQGQWAPGPGALQDGGLYAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGSSTSGSPQQACGPPVEGETGPPPTLASPVASPYPSAAPEPQSLSPPDDDIQSNQSTAQQQQQQQQQQQQQVQQQQQQQQQQQVQQQQQQQVQQQQVQQQVQQTQQQQQQQQQQEHSPQQQLTPHEVERTDCFPGAADLQQYPQHYFKEARPHPSPSVPPHMLTPGGFSALHYLKQPGVMLTSLGQGDGGPTLDAHQYGSPGGPNMTATGLPDIVQQNGKSSKGANSDLRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCERTFRQRAILNQHLRIHSGEKPYQCPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGMTPTLWPQDVPFPPEEGKEEVASTFGDGDTQSGAFSPSPDGNSIQYPAYFKDPKGGNHGVFGAGGPSSFGALQYIKQQQGGAGAGSAGGKSCLPDVIQHGRSAGMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCGRNFRQRTILNQHLRIHTGEKPYKCQQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHASKARRNSNSDTKPPNTPTGLGPVSVPRGLTPTVVKPELYFPQCYAPAFNHHPPVSSSQFPVSQTNGGVAVSGEFKPPTGLPPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00214532;
90% Identity: iTF_00629286;
80% Identity: -