Apic004429.1
Basic Information
- Insect
- Alloplasta piceator
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_946863875.1
- Location
- OX333072.1:1544201-1548556[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.7e-115 1.4e-110 370.0 31.1 1 300 29 325 29 325 0.97 2 3 0.0033 97 2.8 3.0 121 171 324 374 322 378 0.91 3 3 0.03 8.8e+02 -0.3 6.1 195 238 357 399 343 400 0.54
Sequence Information
- Coding Sequence
- ATGGAGTCGACTATCGCGGGACGAAGACGTAACGCTACGCGGCATTCTGCCGAGGATCAAGCTCTCGACCAGATAGCCAAAGAGGCAGAAGCAAGACTGGCGGCGCGCAGACAGGCTCGTGCCGAAGCTCGTGAAATTCGTATGCGTGAATTAGAGAGACAACAAAAAGAGGCAGAGGAGAATGCCGATAGAGTTTACGATATGTGCTCCGCGGAGGGAAACAGAACAATGAGAGTGACGCCGGATCCTGTAAGGACGTCGCGTATGCTCGCGAATTCGAATAATTTTCAATCCAGCAGAAGATCGTCCGAGGATTCTCTGGAAGATACTGGCCTCAGTCGAGATCTTAGATTAGAGCTGAAAGAATTCGAGGAGAAGTTCCGAAAGGCAATGATCGCCAACGCCCAGTTGGACAATGAAAAATCATCGTACGGATATCAAGTAGATTTGTTGAAGGACAAACTCGAGGAATTGGACGAGACAACAGCGCAATTGAGACGCGAGCTCAGAGAAAAGAACAGAGAGGCCGAACAGCTTAAACGCGTAGGACAACGATTAAAGGACGATTTCGACGTATGCAGAGCTCAATTAATGGAGAGAGATACTCTCATTCAGGAGAATGGACTGGTCATAGTGGACGACGAGGGAAGTGGAGACGATGAATCGGAAAAGACAAACGGTCACCGAAAAAGAGTACTAGTCAGCACAGAAGCTGCCGAGCTTTTGCAAAACGCTGGTGAAGGTTCTCTAGACGTACGATTGAGAAAATTCGCTTCCGATCAGAAAGAACTTCAGGATGAAATTGGGCATTTGAGGTTGGAGCTCGAAGAGGCAAAGAGTCGTTTGAGATCGGAAAAATCGCCAGGTTCCGTATTAGGCGGATTTTCGGATTCGGATGACGCGCAGCGAGAAGCGAACAAATTATTGGCCGATTACAAATTCAAAATGCAAAAAGCCGAACAGGATATGTCGACGTTACAGGCGACAGTGGCGAGGCTAGAGAGTCAAGTAATACGTTACAAATCGGCGGCCGAGGCATCGGAAAAGGCCGAGGATGAATTGAAAGTTGAGAAGAGAAAATTGCAGAGAGAAGTTCGTGAATCGCAAGCTCGCGTCGAGGAGCTCGAAACTGCGAATTCGCACTTACAGAAACGATTGGACAAGCTAAAAAATGCTAAATCGGCACTGCTGAAAGAGCTCTGA
- Protein Sequence
- MESTIAGRRRNATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCSAEGNRTMRVTPDPVRTSRMLANSNNFQSSRRSSEDSLEDTGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYGYQVDLLKDKLEELDETTAQLRRELREKNREAEQLKRVGQRLKDDFDVCRAQLMERDTLIQENGLVIVDDEGSGDDESEKTNGHRKRVLVSTEAAELLQNAGEGSLDVRLRKFASDQKELQDEIGHLRLELEEAKSRLRSEKSPGSVLGGFSDSDDAQREANKLLADYKFKMQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQARVEELETANSHLQKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01102050;
- 80% Identity
- -