Apic016726.1
Basic Information
- Insect
- Alloplasta piceator
- Gene Symbol
- retn
- Assembly
- GCA_946863875.1
- Location
- OX333075.1:52679245-52694193[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-20 8.5e-17 62.0 0.0 14 89 89 162 85 162 0.94
Sequence Information
- Coding Sequence
- ATGGCGGAAAGGCTCGGGTCGCTGCCGAGCATCCCCTCGCTGAAATTGAGCGCCGCGTTGCACATGCACACGGATAAAGAGAAAGTCGCGAATTTTTTTAGTTATCCGGTCTCCTGCCGGGCTATAAGAGCCCGCGAGGAGGCAGGAGAGAGCCCGAGGGTCCAAGAGAGCAAGAGGAAGGGAGAGGGAGCGAGAGAGAGAAGGGACCTCGATAGCCCGAAATTGTGGGTTCCCCTTCCCGGCAATATGCCACACAATATAAGCGCGCATCGGGGAACGCCGATAAATCGTTTACCGATAATGGCAAAATCGGTGCTCGATCTGTACGAGCTGTTTCAGTTGGTAATAGCCCGAGGCGGTCTCGTCGACGTTATAAACAAGAAACTCTGGCAGGAAATCATCAAGGGTCTTCACCTGCCGTCCAGTATCACATCGGCAGCCTTCACGCTTCGAACCCAATACATGAAATATCTTTATCCGTACGAAGGTGAAAAATTGGGTCTGTCAACGCCGTCGGAATTACAAGCGGCGATCGATGGTAATCGACGCGAGGGACGAAGAAGCAGTTATGGGACTTACGGCGGTGGTGGAGGCGGAGGAAGTGACAGTATGATCCAGAGAAATCCGCACACACCGGGATCCATGGCGTTGCACGCTCAAATGTCGCCCCTGTCTCTCGTCTCAGCGGTCACCGGTGGTCAGCATCACGGCTCCCAGTCACTTCTCAACGGTAGCGCGGCTCACACACCTCTGCCACATCATCCCCATCATCCGCAGCATCCCCAAGGTCCAATACCAGGAATGGCACCAGCCGAATTCGAGGCTCGTATGGTCGAGTACGTCAAATTGTTGAACAAGGAGCTCAGAAATACCGGGGGTGCGACACCACCGCCGATGATACATCGGCAGGGTAGCGCCTCGCCACCCTCGACGACACCACCCCGTGACAGCGCTTTCAGCGCTCTCGAAATGTCACGACTAACACTCTGGAACATGTACAACAATAATACCCTCTATCCGGGGGTCGGTCATCAACCGCCATTGTCACCGCAGGCATCGAATTCTCCACATCCACAAGCGGCGAGTCCCGAGCCTCAGAGAGAAGCCCTCGATCTTGGTCTCAGATCATCGCCTCTGTCGTCATCACCGACGAGACACAGTCCACCCTCGTCGAGCAACAGCATTCAAGTTAAGAGGGATCCAGACCTCACAGGCCCACCTGGTCCACCACCTGCCAAGAGGCTAATGTCCGACGATGATAGTCTGAACGACAAGTGCGTACCGGCATTGGCTGGTACACACATTAAGATCTCAAATCGTGGTGACGGACGTAACGGTGACAATTCACTCGTCGTCAGTATGGAATTGAACGGTGTCATGTACCAGGGTGTACTCTTCGCCCAGATGGACGGCAGGAGTACGACGACCGCTACTAATAATAACACAAAAGCGGCTCGGAGTATCGTATCGTGA
- Protein Sequence
- MAERLGSLPSIPSLKLSAALHMHTDKEKVANFFSYPVSCRAIRAREEAGESPRVQESKRKGEGARERRDLDSPKLWVPLPGNMPHNISAHRGTPINRLPIMAKSVLDLYELFQLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYEGEKLGLSTPSELQAAIDGNRREGRRSSYGTYGGGGGGGSDSMIQRNPHTPGSMALHAQMSPLSLVSAVTGGQHHGSQSLLNGSAAHTPLPHHPHHPQHPQGPIPGMAPAEFEARMVEYVKLLNKELRNTGGATPPPMIHRQGSASPPSTTPPRDSAFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQASNSPHPQAASPEPQREALDLGLRSSPLSSSPTRHSPPSSSNSIQVKRDPDLTGPPGPPPAKRLMSDDDSLNDKCVPALAGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQMDGRSTTTATNNNTKAARSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01129126;
- 90% Identity
- iTF_01056577;
- 80% Identity
- -