Basic Information

Gene Symbol
nfxl1
Assembly
GCA_963978815.1
Location
OZ022217.1:3375543-3379897[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 1.6e+04 -8.3 5.6 15 19 153 157 152 157 0.81
2 17 0.62 4.9e+03 -2.5 0.9 4 10 188 194 188 194 0.91
3 17 4.1e-08 0.00033 20.4 17.0 1 19 202 219 202 219 0.99
4 17 1.4e-09 1.1e-05 25.2 15.7 1 19 255 273 255 273 0.98
5 17 4.4e-08 0.00035 20.4 15.2 1 19 308 326 308 326 0.99
6 17 5e-09 4e-05 23.4 9.1 1 18 361 378 361 379 0.97
7 17 0.22 1.8e+03 -1.0 0.8 1 5 388 392 388 392 0.94
8 17 7.6e-05 0.6 10.0 17.1 1 18 413 430 413 431 0.94
9 17 1.9e-06 0.015 15.1 13.9 3 18 442 457 434 458 0.85
10 17 0.00076 6.1 6.8 5.8 9 19 506 516 505 516 0.91
11 17 0.16 1.3e+03 -0.6 5.8 3 12 527 536 526 536 0.89
12 17 2 1.6e+04 -4.5 8.5 14 19 564 569 564 569 0.94
13 17 0.083 6.6e+02 0.3 1.2 5 11 582 588 579 590 0.89
14 17 2 1.6e+04 -4.8 1.4 6 10 595 599 594 599 0.58
15 17 0.00068 5.5 7.0 5.0 1 11 605 615 605 616 0.95
16 17 2.9e-05 0.23 11.3 19.0 3 19 646 662 645 662 0.92
17 17 2.5e-05 0.2 11.6 12.9 1 17 705 723 705 725 0.86

Sequence Information

Coding Sequence
ATGATGAATAACTTATCTTCCAACAAGAAAATTGCATGGGGTACACCAAATATTGGTAGTGCACAAAGAAGTGAAGCAAAGTTTAGAGCAGCTCAGCAAAAGCTAGAGGAGGCTGTTAAAAAGCATGCAAATGATTGTGAATCCTCTGAGGAAGAAGAGGAATTGGAGACAGACAATATTATAAGCAAGATTTTACAAAAGTATACACAAAATGCTACCACTCTTGACATTGGTAGAACCAACTCATTTTTACAAGATGCATTTCAATCAGGTGCCAATACCTGCCTTATTTGCATATCATCAATTAAAAGAACTGAATCAGTATGGAATTGTGATCATTGCTAttgttgctttcatttgatgtgtATTCAAAGATGGTCTAAAGATACAATTGTCCATAAGAAACTCGCATTGGAGGGTCAAATTCAGTATAGAAAGATTGTACTGAATTGGTGCTGCCCAAAGTGTCGAGCTGAATATGAACCTGACTATATTCCTAAGGACTACTAttgtttttgcaagaaaaccTTAAATCCTcaatttcaaactttattGGTACCACATAGCTGTGGAAATACTTGTGCAAAACTCTTAAAGCCTGAGTGTGGCCATAAGTGCTTACTGTTGTGTCATCCAGGGCCTTGTCCACCATGCCCTCAAACTGTAAAAGTCTCTTGCTATTGTGGCACAGCCCCTTTGGCATTCCAGCGTTGTACTAATAAGGAATGGAGTTGTGGTGCTCAGTGCAAAAAGGAATTATCATGTGGTAAGCATAAGTGCCAGAATATTTGCCACCCAGGTGAATGTAAACCATGTTCAAAGAAAAGCatgcaaaaatgcaaatgcactgcTAGTATCAAATTGCGTGATTGTATATCTCCAGTTTGGCAATGTGACAAGATTTGTAACAAGGCTTTACCTTGTGGTCATCATAAATGTGAAATAGTTTGCCACGATGGCGATTGCGGTGATTGCCCCCGTTCTAAAGAGAGAACTTGCCCTTGTGGAAAAGCTTCTTATCAGTTAGACTGTACAGAAGAAGTACCAACATGTGGTGATACATGTGGGAAAACTTTGGATTGTGGAATGCACTTTTGTCAACAACGTTGTCATAAGGGAAATTGCCAAATGTGTTTGGAAACTGTGAATAAGGCATGTAGATGTGGGCAACACAAGAAGGATATTCAGTGTTGCAAAGTATATCTTTGTgaaacaaaatgtaaaaatattcgTGATTGCAACAAACATCCATGCAACCGAAAGTGTTGCGATGGTAATTGTCCGCCTTGTGAAAAACCTTGTGGTAAAACATTAAGCTGCAAGAAGCATAGTTGCACATCAATTTGTCATCAAGGGCCCTGTTATCCTTGCAACTTGACCGAAAAAGTATCATGTTTTTGTGGTGCGACTACAATAACGGTGCCTTGCGGTAGAAAGCATAGGACCAAACCGCCAAAGTGTAACAAGTCTTGCAAaatTCCTCCTGAATGTCATCACAAATCACGAGAAGTTCATAAATGCCACTTTGGTGATTGTCCTTCATGCCAGCAGATATGCGccaaattatttgaaaattgtgaACATGCTTGCCCAGCACGGTGTCATTCCGCAGTTCTGGTAAAACTACAACCGCCCCCAAATGTTTTACCTTGGGAGAATAAGGGACCTCAAGTGGAGAAACGTTGCTTGCCTTGTCCACCATGCCCAGAACCAATGAGGATAACTTGCTTTGGAGGTCATGAAACTTGTGATTATCCTTGTCATCAAGCAAGGCCAATGAGTTGTCATCGACCATGTGGCAGGTTCTTGCTCTGCTCTAATCATACATGCTCTCTGGAATGCCACGTGGTTGAAAATGCGAAAGATTCTTCTTCGGCTGGAAGCAACTGCGAGATTTGTGATCTGGGTTGTGAAAAACCTAGGGTAGCAGGATGTACACACCCTTGTCCGAAACCGTGCCATTCTGGAGAATGTCCTCCATGCAAAAATATGCTAAGAATTACTTGTCACTGTGGTCTCTCGCAACCGTATGTTAATTGTTATGAGTGGACATCAACCACGgataaagaaaaattacaGAGTTGCGGAAATCAGTGCCAATTAAATtTTCCTTGCGGACATCGTTGTCGTGCAAATTGTCATTCCGGTGAATGCCCAAATCCTGAACAGTGCAAGAAGAAAGTTAAAATCTTTTGTAGCTGCAAACGTTTGAAAAAGGAATTTACATGCGATGTTGTGCGTAATGGAAATGTTTCAGTTCCATGTGACGATAGTTGTACTGAAAAGCAACTTAAAGAAAGGGAAGAGAAGGAATTAAAAGATATTGAGAAACGAAAGGTACTGGAAGAACGCAATAAACGTGAATTGGAAAAGTATGAAAAAATGTTTGCCAAGAGGAAGGCTAAGGAAAAGAAAGTTTCCAAAGAAACCACAAGACGCAACAATATtcaaaaGTCTTCGATTTCGACGATAGATTCTCCTTACATAAAAGATTACAAAACACCAGGAACTAAAAATTCTCAAACATTACGAAGGGTTAAATTACTGTTGGAATTGAAAGAaagGCGGCATTCTACCATAGATGAAAAACGGTGTATAAGTGAAGTGTTTACAGaagaaaatatacaaaatgAAGTTTCTGAGGAACCTATGGATATCAGTGAAGTTATTACAAAGAAGCAaagaaaatatgcaaacaagCTTATGATGTCTGAATGGTTTATTGAACGTCCAGAAGATTTAGAAAGCAGTTGGTTAATGAAAGTATGCCCTAAAGGTGTCAGAAATCTTGTAGTTGCTCATAAGgGTCGGACAAAATGTTTTAAGAAAAATGGTCATTTTATTACTCAATTTCATTCACAGCTACCTGGAGGTAGTCCATCAAGTAAGCcaatgaaatttacaattttagaTTGTATCTTTTGTGAGGAAACAGGCACTTACTATGTGCTTGATGTTCTGGTGTGGAATTCTTACTCCGTTCAAAAGGCAACTactGATTTCCGCTTCTTCTTCCTGAAGTCAAAGCTTCTAGAGTCCACAGTGCTTGAAACATGTAGGgagaataattttaaatttgaatatattcAAGAAAGACCTGCTGAATATCCAATAATTGAGGAAGAATTCTCAAAATTTAATGCCCAAACTGatggaatattattttatcattcaGAATTAACTTATCTGTCACAAGTAACACCACTTGTTGGTtggttgaaaatatttatgataccGGAAATACTTTCAATTCCAATTCACCATGATTATTATCATGAAAGGCCTGAAGACTatagaaatttattaagttattCTACCCAATTTCAAAAAAGGCGCCAAAAATCACGAAAGTCACGTCAAAGAGACGTTGAAATGACAGAGGTAAATAATAGTGACAGTTAA
Protein Sequence
MMNNLSSNKKIAWGTPNIGSAQRSEAKFRAAQQKLEEAVKKHANDCESSEEEEELETDNIISKILQKYTQNATTLDIGRTNSFLQDAFQSGANTCLICISSIKRTESVWNCDHCYCCFHLMCIQRWSKDTIVHKKLALEGQIQYRKIVLNWCCPKCRAEYEPDYIPKDYYCFCKKTLNPQFQTLLVPHSCGNTCAKLLKPECGHKCLLLCHPGPCPPCPQTVKVSCYCGTAPLAFQRCTNKEWSCGAQCKKELSCGKHKCQNICHPGECKPCSKKSMQKCKCTASIKLRDCISPVWQCDKICNKALPCGHHKCEIVCHDGDCGDCPRSKERTCPCGKASYQLDCTEEVPTCGDTCGKTLDCGMHFCQQRCHKGNCQMCLETVNKACRCGQHKKDIQCCKVYLCETKCKNIRDCNKHPCNRKCCDGNCPPCEKPCGKTLSCKKHSCTSICHQGPCYPCNLTEKVSCFCGATTITVPCGRKHRTKPPKCNKSCKIPPECHHKSREVHKCHFGDCPSCQQICAKLFENCEHACPARCHSAVLVKLQPPPNVLPWENKGPQVEKRCLPCPPCPEPMRITCFGGHETCDYPCHQARPMSCHRPCGRFLLCSNHTCSLECHVVENAKDSSSAGSNCEICDLGCEKPRVAGCTHPCPKPCHSGECPPCKNMLRITCHCGLSQPYVNCYEWTSTTDKEKLQSCGNQCQLNFPCGHRCRANCHSGECPNPEQCKKKVKIFCSCKRLKKEFTCDVVRNGNVSVPCDDSCTEKQLKEREEKELKDIEKRKVLEERNKRELEKYEKMFAKRKAKEKKVSKETTRRNNIQKSSISTIDSPYIKDYKTPGTKNSQTLRRVKLLLELKERRHSTIDEKRCISEVFTEENIQNEVSEEPMDISEVITKKQRKYANKLMMSEWFIERPEDLESSWLMKVCPKGVRNLVVAHKGRTKCFKKNGHFITQFHSQLPGGSPSSKPMKFTILDCIFCEETGTYYVLDVLVWNSYSVQKATTDFRFFFLKSKLLESTVLETCRENNFKFEYIQERPAEYPIIEEEFSKFNAQTDGILFYHSELTYLSQVTPLVGWLKIFMIPEILSIPIHHDYYHERPEDYRNLLSYSTQFQKRRQKSRKSRQRDVEMTEVNNSDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00084219;
90% Identity
-
80% Identity
-