Acur009078.1
Basic Information
- Insect
- Aleochara curtula
- Gene Symbol
- bab1_3
- Assembly
- GCA_963978815.1
- Location
- OZ022220.1:5755798-5757704[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-16 1.2e-12 47.2 0.2 1 45 372 416 372 416 0.96
Sequence Information
- Coding Sequence
- ATGTATAGCAACGCGCAACATTATTGTTTGCGCTGGAACAATCACCGATCGAATTTGCTCACCGTCTTCGATGAGCTGCTCCAGAACGAAGCCTTCACTGATGTGACACTTGTCTGCGATGGGGGTAGTCCCATCAAGTGCCATCGCATGGTCCTCGCCGCATGCTCACCATACTTTCAAAACTTATTCACCGACTTACCGTGCAAGCATCCTGTCGTCGTCCTTAAGGATGTCCGATATTCTGACATCAAGGCGATCCTGGAGTACATGTACCGCGGTGAAGTCAATGTTGGACAAAACCAACTTGCCGACTTGTTGCGGGTTGCGGAAGCGCTCAAAGTCAAGGGTTTGGTGGAGGAGAAGCGTGCCAGTGAGTCTAGTAATAGCGATGTAATGCGCCCCGACTCTGATCAGCCGTCCCCAACTGGAGTCAGCACATCGAGCACATCCAATAATCAGTCCACAGTCCATAGCAGTAGCGCCGAATCGCCGCCACATTCCACAAATAATGGCTTCGTTGCCTACAAGAATCCTTACAATCTGTACAATAAGAAACCATCCTCATCGTCCACCACATACTGCGCGGAATCGCAGAGCTCACCACGAATGAACATTCCAATGTGGCCTATGCCAGGCATGCCAATGCCGCCCGCCAGCCATTCACCCCCCGAGCATAGTGCTTCGAGTGCGAATCCAAATTCTGCCAACACGGTGGCTGCTGCGGCAGCAGCCATGCTTGGTAGCTGCTACCAGGGAAGCAACACCGATATGAATCCACTCAAGCGGAAGAAGCTTTCGAGTTTGCTGATGAGTCGTGACACGCCGATCCTGCGTACCGTCCTTGGCCAGGCTGACTCATCGCAACCAGTTAGTTTAGTGTGCCATTCCGATGAGAGTCCTGGCAACGTAAATTCAAATGGCGTTGAAGAAGTAGCTGGAAAGCATATCAAGACTGAACCGTCCGAAGGTGCACAATCGCCTTTCACCGACATATCCATGGAGTATGATGATAAGAAAATGAGTATGAACACATCCTATGCAAGCGGGATCTCAGGCATTGCCACTTACGTCCCAAGCAATGCAAAACCCGAATGGAAACGATACAAACAATATACGCGAACAGAGATTATGTCTGCCATAGAAGCGGTACGCAATGGCATGTCCGCCCTGCAAGCCGCGCGTAAATATGGAGTACCCTCGCGAACCCTCTACGACAAAGTCAAGAAGTTGGGTATCACGACGAGTAGACCGTTCAAACGAGGCTCAAATGGTAGCAATCTTGGCTTCCCCTATGGTATCAGTGGTACGAGTTCACCCTTTGGAATGGATTCTGCCGACGAGCACAgtatcaacaacaacagttcCTTGCTGGAGGCTAGCAGCATCCTGCAGCATGCGCTTGATGGTAGAGACGATAAGGAAACCCTTGCAGCAATgatggcagcagcagcagcacatgcTGCAGTCAGTGGCCGGAACACAAGTcccaataataattcatcagcGCGAACAACAAGTCCCCTGCCGGGTAATCTTAAGTATATGCGGATGAATAGCCTACCCCCTTCGCCGGTGGTCGGCAGTGATCCCAATCACAGCGAGACGAATGGTAGCGGTAGTAGTACGGATCGGGATCATGATGACCATGATCCTGAAAATGACGACCACGAGGATCACGACCACGACCCCGACGAGCATGATCAAGTCGAAGATCTCTCAGTCGCCCGCAAACAGGTGATCATGCCTCCCATCAACATGTCATCGATCATGAAAAAAGAGGAAATGCTCAAAGAGACGCTCATGGAAGAGATGCGACGCGAGGTAAGCGTCGATAACGCTGAGTAG
- Protein Sequence
- MYSNAQHYCLRWNNHRSNLLTVFDELLQNEAFTDVTLVCDGGSPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVRYSDIKAILEYMYRGEVNVGQNQLADLLRVAEALKVKGLVEEKRASESSNSDVMRPDSDQPSPTGVSTSSTSNNQSTVHSSSAESPPHSTNNGFVAYKNPYNLYNKKPSSSSTTYCAESQSSPRMNIPMWPMPGMPMPPASHSPPEHSASSANPNSANTVAAAAAAMLGSCYQGSNTDMNPLKRKKLSSLLMSRDTPILRTVLGQADSSQPVSLVCHSDESPGNVNSNGVEEVAGKHIKTEPSEGAQSPFTDISMEYDDKKMSMNTSYASGISGIATYVPSNAKPEWKRYKQYTRTEIMSAIEAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSNLGFPYGISGTSSPFGMDSADEHSINNNSSLLEASSILQHALDGRDDKETLAAMMAAAAAHAAVSGRNTSPNNNSSARTTSPLPGNLKYMRMNSLPPSPVVGSDPNHSETNGSGSSTDRDHDDHDPENDDHEDHDHDPDEHDQVEDLSVARKQVIMPPINMSSIMKKEEMLKETLMEEMRREVSVDNAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629721;
- 90% Identity
- iTF_00049354;
- 80% Identity
- iTF_00049354;